Cinclus cinclus (white-throated dipper): 134043503
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Entry
134043503 CDS
T10813
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134043503 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccic03019
]
134043503 (DCP1B)
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134043503 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
134043503 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
134043503
NCBI-ProteinID:
XP_062347880
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All DBs
Position
4:complement(29222624..29260942)
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AA seq
601 aa
AA seq
DB search
MAAALGRGLDISLAALRQHDPYISGIVDVASQVALYTFGHRASQWEKTDVEGTLFVYTRS
ASPRHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEECQRIAE
LMKNLTQQEQFKAQQGTGTGVSPMIMNSANNKEVDILRMLTKAKDEYTKCKTCSEPKQIT
SSSAIYSNPNLIKPIPVKPSENQHQRISQQSKGVDPEPQHLSLTALFGKQDKADVSEPLN
KQHQENLPVRQGVVRSLSYEEPSRHSPSAEKPLCPAIQKLMVRGTELHPLAEFPESRLCE
NGNVPPVGETFSGLFQPVTSHGMATTHGAQDTAGTQSLLQKLQSQSGSVTTVDPSATGPV
NSTVSVFSRTPAPVGAPAAPVNNMSQPPLVYFNGPIPGQTLEAQTLSKEKSKLPRRSLPL
SGNQTANSGVISPQELLKKLQIVQQEQQLHVSSRPTLAAKFPVVTQNTNTLKPLDSWIEK
APGTEKQSALFQVISPQRIPATVTPTLLMSPMVFTQPTPAPPKATDSGRLAAANPEPAAS
SASLLLPLPAPEPAVASSTSITKLQLQETLLHLIQNDDNFLNIIYEAYLFSVRKAALKKS
M
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgctgggccgggggctggacatcagcctggcggcgctgcggcagcacgac
ccctacatcagcggcatcgtggacgtggccagccaggtggcgctctacaccttcggccac
cgtgccagccagtgggagaagacggatgtggagggaacactgtttgtttacacgagatcg
gcttctccaaggcatggtttcacaattatgaacagactgagcatggaaaatcgaacggaa
cctattactaaagacctcgatttccagctccaggacccttttctgctctacagaaatgcg
agattgtccatatatgggatttggttttatgataaggaagaatgccaaagaattgcagag
ctcatgaaaaacctaactcaacaggaacaattcaaagcacagcagggcacaggaacaggg
gtgtcccccatgattatgaattctgctaataacaaagaagtggatatcttacggatgctt
accaaggccaaagatgagtataccaagtgtaagacgtgctcagagccaaaacaaataacc
agttcctctgcaatctatagcaaccccaacctaatcaaacccattccagtgaagccgagt
gagaatcagcatcagagaatctcccagcagagcaagggtgtggatcctgaaccccagcac
ttgtctttgacagcactgtttggcaaacaggacaaggcagatgtctccgaaccactcaat
aagcagcaccaggagaacctccctgtcaggcagggcgtggttcgctcgttgtcctacgag
gagcccagcaggcactcccccagtgcagagaagccgctgtgccctgccatacagaagctc
atggtgcgtggcacagagctccatcccctcgctgagttccctgagagtcgcctctgtgaa
aatggcaatgtcccccccgtgggggagactttctcaggactcttccagcctgtgacttcc
cacggcatggcaacaactcacggagctcaggacactgctggcactcagagcttactgcag
aagttgcaaagtcagtcagggtcggtgactacagtggaccccagtgctacaggacctgtg
aactccacagtttccgtgttcagcaggactcctgctcctgttggagcaccagcagcacca
gtaaataacatgagccagccccctctggtgtatttcaatgggcccataccaggccagact
ttagaggctcagacacttagtaaagaaaaatccaaacttcccagacggtcacttcctctc
tctggcaatcaaacagccaattctggggtgatttcacctcaagaactattgaaaaaactc
cagatagtacaacaagaacagcagctccatgtatccagcagaccaacgttggcagctaag
ttcccagttgtcacccagaacaccaataccctgaaaccactggattcttggatagaaaag
gctccaggaacagaaaaacagagcgctctcttccaggtcatctcccctcagcgcattcct
gccactgtgacccccaccctgctgatgtcccccatggtgttcacccagcccacgcccgct
ccacccaaagccactgacagcgggcgcttggccgcagcaaaccctgagccagctgccagc
tcggccagcctgctcctgcccctgcctgccccagagccagccgtggccagcagcacctcc
atcaccaagctgcagctgcaggaaacacttctgcacctcatccagaatgatgacaacttc
ttaaacattatttatgaagcatatctcttcagtgtgaggaaggcggcgctgaaaaagtct
atgtga
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