Cinclus cinclus (white-throated dipper): 134043533
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Entry
134043533 CDS
T10813
Symbol
RPAP3
Name
(RefSeq) RNA polymerase II-associated protein 3
KO
K23002
RNA polymerase II-associated protein 3
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccic03021
]
134043533 (RPAP3)
Transcription machinery [BR:
ccic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
134043533 (RPAP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
RPAP3_C
TPR_2
TPR_11
TPR_8
TPR_9
TPR_19
TPR_14
TPR_12
TPR_16
TPR_7
TPR_17
ANAPC3
NOMO_8th
Motif
Other DBs
NCBI-GeneID:
134043533
NCBI-ProteinID:
XP_062347942
LinkDB
All DBs
Position
4:complement(41288242..41306541)
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AA seq
668 aa
AA seq
DB search
MMSAPSKAIELQLQMKQNAEELQDFMRELESWEKDIKEVDSELRKQSGVPEENLPPIRNK
AFKKKKKSKNKVPSKITSEENKKNKIKSYDYEAWGKLDVDKILEELDKEDSTHDSVSPES
DSEEDGIHVDAEKALAEKEKGNNYFKQGNFDEAIKCYTRGMHFDPYNPVLPTNRASAFYR
MKKFSVAESDCNLALALDKNYIKAYARRGAARFALKNLKGAKEDYEKVLALDANNFEAKN
ELKKIDQALLSKENSEQEEFADAVRTGLTDEEKQHIEDQQLKQKAIAEKDLGNGYFKEGK
YEAAIECYTRGIAADGTNALLPANRAMAYLKIEKYKEAEDDCTQALLLDASYSKAFARRG
AARVALGKLKEAIQDFEAVLKLEPGNKQAINELTKIRNELAEKDQQSHQEYPAVLIKEAE
IKNIVKVIDNPLLIKSTKPLRRIDIEEVDDDTSDGDLPSTTLVNNWRNSVSVEATETLDQ
DDLLTTVDIPKAKHLKIEEISDTSLLQLPVNVKGISSTMHPSFPASKQREKEIRRSFMST
SPVPPIPANSFQLESDFRKLKDCPENMYLYLKQIEPSLYAKLFQKSLDPDLFNQILKILH
DFYIEKEEPSLILEILRKLSELKRFDMAVMFMSGSEKKITQVLFNHVNHMGLKDASVEEL
EKKYGIFS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcgcaccaagtaaagcaatagagctgcagctgcaaatgaaacaaaatgctgaa
gagctgcaggattttatgagagaattggagagctgggaaaaagatattaaagaagtggat
tctgaacttaggaaacagagtggggtcccagaagagaatttgccaccaattcgaaacaag
gcttttaagaaaaagaagaaaagcaagaataaagtcccttcaaagataacctctgaggaa
aacaagaaaaacaagatcaagtcttacgattatgaagcatggggaaaacttgatgtggat
aaaatacttgaagaacttgataaagaagatagtactcatgattctgtatctccagaatca
gactctgaagaagatggaattcatgtagatgctgaaaaggctcttgcagagaaggaaaag
ggtaataactattttaaacaaggaaactttgatgaagctataaaatgctatactagaggg
atgcattttgatccatacaatccagtgttgcccacaaacagagcatcagctttttataga
atgaaaaagttttctgttgcagaatctgactgcaatttagcacttgctttagataaaaat
tacataaaggcttatgcgagaagaggagctgctcgctttgctctgaaaaatcttaaaggt
gctaaagaagactatgaaaaagttttggcgctggatgcaaacaacttcgaagcaaaaaat
gaactgaagaaaattgatcaggctttgttgtcaaaagaaaattcagaacaagaagagttt
gcagatgcagtcagaacaggattaacagatgaagagaagcagcacattgaagaccagcag
ctgaagcagaaggcaattgcagaaaaagatctcggtaatggttatttcaaagaaggaaag
tatgaggctgcaatagaatgttacacccgtggtatcgcagcagatggcaccaatgcacta
ctgccagctaacagagccatggcctacctaaagattgagaagtacaaagaggcagaagat
gactgcactcaagctctgctcttggatgcttcctattctaaagcttttgccagaagagga
gctgccagagttgctcttggaaagcttaaggaagctattcaagatttcgaagctgttctg
aagctggaacctggaaataaacaagcaataaatgaactcacaaaaataaggaatgaatta
gctgagaaagaccagcagagtcaccaagaatatcctgcagtattgataaaagaagcagaa
attaaaaatatagtgaaagtgattgataatccattgctgattaaatcaacaaagccattg
cgaagaatagatattgaagaagttgatgatgatacatcagatggtgacttgcccagcact
actttagtcaataactggaggaattcagtgagtgttgaagcaacagaaactctagatcaa
gatgatctgttgactacagttgatattccaaaagcaaagcacttgaaaatagaagaaatc
agtgatacgtcactattacagctgcctgtaaatgtgaaaggaatttcatcaacaatgcat
ccatcttttcctgcaagcaaacagagagaaaaagaaatcagaaggtcgttcatgtctact
tctccagttcctcccattcctgcaaattctttccagcttgaatctgacttcaggaagttg
aaagactgcccggaaaacatgtacttatacctgaagcaaatagagccctcactttatgca
aagctgtttcagaaatccttagatccagacttgtttaaccagatcctgaaaattttacat
gacttctacattgagaaagaggagccatcactcatccttgaaatcctccggaagctctct
gaattaaaaagatttgatatggcagtaatgtttatgtcaggttcagaaaaaaaaattaca
caggtattattcaatcatgtgaaccacatgggattaaaagatgcttctgttgaagaattg
gagaagaaatatggcattttctcttag
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