Cinclus cinclus (white-throated dipper): 134043556
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Entry
134043556 CDS
T10813
Symbol
CNOT2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134043556 (CNOT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccic03019
]
134043556 (CNOT2)
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134043556 (CNOT2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
134043556 (CNOT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
134043556
NCBI-ProteinID:
XP_062348009
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Position
4:45535075..45616121
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AA seq
520 aa
AA seq
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MFGASRKKFVEGVDGDYHDENMYYSQSSMFPHRSEKDMLASPSTSGQLSQFGASLYGQQS
ALGLPMRGMSNNTPQLNRSLSQGTQLPSHVTPTTGVPTMSLHTPPSPSRGILPMNPRNMM
NHSQVGQGIGIPSRTNSMSSSGLGSPNRSSPSIICMPKQQPSRQPFTVNSMSGFGMNRNQ
AFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSGNPTPLINPLAGRAPYVG
MVTKPASEQSQDFSIHNEDFPALPGSSYKDPTSSNDDNKSNLSTSGKTSSSTDGPKFPGD
KSSTTQNNNQQKKGIQVLPDGRVTNIPQGMVTDQFGMIGLLTFIRAAETDPGMVHLALGS
DLTTLGLNLNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDKLASIKLGRYG
EDLLFYLYYMNGGDVLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTMKTNTYERGTYY
FFDCLNWRKVAKEFHLEYDKLEERPHLPSTFNYNPAQQAF
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgcttcaaggaagaagtttgtagagggggttgatggtgactaccatgatgag
aacatgtactacagccaatcatcgatgttcccacatcggtcagaaaaagatatgctggca
tcaccatcaacatcaggtcagctgtctcagtttggggcaagtttatacgggcaacaaagt
gcactaggccttccaatgaggggaatgagcaacaatacccctcagttaaatcgcagctta
tcacaaggcactcagttaccgagccacgtaacgccaacaacaggggtaccaacaatgtca
cttcacacgcctccatctccgagcagggggatattgcctatgaatcctaggaatatgatg
aaccactcccaggttggtcagggcattggaattcccagcaggacaaacagcatgagcagt
tcagggttaggcagccccaacagaagctctccaagcataatatgtatgccaaagcagcaa
ccctcccgacaaccttttactgtgaacagtatgtctggatttgggatgaacaggaatcag
gcatttggaatgaataactccttatcaagtaacatttttaatggaacggatggaagtgaa
aatgtgacaggactggacctctcagattttccagcactagcagacagaaacagaagggaa
ggaagtggcaatccaactccattaataaaccctttagctggaagggcaccctatgttgga
atggtaacaaaaccagcaagtgagcagtcccaggacttttcaatacacaatgaagatttt
ccagcattaccaggttccagctacaaagatccaacatcgagtaatgatgacaataaatct
aatttgagtacatcaggcaaaacatcatccagcacagacgggcccaagtttcctggagac
aaaagttcaactacgcaaaacaacaaccagcagaaaaaagggatccaggtgttacctgat
ggtcgggttaccaacattcctcaagggatggtgacggaccagtttggaatgattggcttg
ttaacattcatcagggcagcagagacagatccaggaatggtacatcttgcgttaggaagt
gatttaacaacactaggtctcaatctcaactctcctgaaaatctttatcccaaatttgca
tccccgtgggcatcatcaccttgtcgacctcaagacatagacttccatgttccatctgaa
tacttaactaacattcacattagggataagctggcttcaataaaacttggccgatatgga
gaagatctcctgttttatctctattacatgaatggaggagatgtattacagctattagca
gcagtagagctatttaatcgggattggagataccacaaagaagaaagagtatggatcacc
agggcacccggcatggagccaacaatgaaaaccaatacgtacgagaggggaacatattat
ttctttgactgtcttaactggaggaaagtagctaaggagttccacctggaatatgacaaa
ttagaagaaaggcctcatctgccatcaaccttcaactacaaccctgctcagcaagccttc
taa
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