Cinclus cinclus (white-throated dipper): 134043584
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Entry
134043584 CDS
T10813
Symbol
POLR3B
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03020
RNA polymerase
ccic04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
134043584 (POLR3B)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
134043584 (POLR3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccic03021
]
134043584 (POLR3B)
Enzymes [BR:
ccic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
134043584 (POLR3B)
Transcription machinery [BR:
ccic03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
134043584 (POLR3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
134043584
NCBI-ProteinID:
XP_062348105
LinkDB
All DBs
Position
4:54977642..55049126
Genome browser
AA seq
1130 aa
AA seq
DB search
MEALGLGALTPEQAAAPINTVEEKWRLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMKAN
EKVTSDADPMWYLKYLNIYVGTPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYTRG
SQRIIRNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQE
QLSKNRIIVEADRKGTVGASVTSSTHEKKSRTNMVVKQGRFYLRHNTLSEDIPIAIIFKA
MGVESDQEIVQMIGTEEHVMAAFAPSLEECQKAQIFTQMQALKYIGNKVRRQRIWGGPKK
TKMEEARELLASTILTHVLVKEFNFRAKCIYTAVMVRRVILAQGENKVDDRDYYGNKRLE
LAGQLLSLLFEDLFKKFNSELKKIADQVIPKQRAAQFDVVKHMRQDQITNGMVNAISTGN
WSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSD
TPEGEACGLVKNLALMTHITTDMEDGPIIKLASNLGVEDVNLLCGEELSYPNVFLVFLNG
NILGVIRDHQKLVNTFRILRRAGYINEFVSISTNLSDRCVYISSDGGRLCRPYIIVRKQK
PAVTSKHMEELAQGYRNFEDFLHEGLVEYLDVNEENDCNIALYENTINKDTTHLEIEPFT
LLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMVKTK
TIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLKRYT
NQTFDKVMGPMLDAATRKPIWRHEILDADGICSPGEKVENKQVLVNKSMPTVTQTPLEGS
SVPQQPQYKDVPVTYKGATDSYIEKVMISSNAEDAFLIKMLLRQTRRPEIGDKFSSRHGQ
KGVCGLIVPQEDMPFCDTGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVLDGKFHYGTA
FGGSKVKDVCEDLIRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMHAR
ARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCGQC
GLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLAKYNE
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgctgggtctgggcgcgctcaccccggagcaggcggcggccccgatcaacacg
gtggaggaaaagtggagacttcttccagcatttctaaaggtgaaaggcctggtgaagcag
cacatagactcattcaactatttcatcaatgttgagataaagaaaatcatgaaggctaat
gaaaaagtgacgagtgatgctgacccaatgtggtacctgaagtacctcaatatctatgtg
ggtactccagatgtggaagaaagcttcaatgtgacacggccggtatcacctcatgagtgc
cgcctgagggacatgacctactctgcacccatcaccgtggatattgaatacacccggggc
agccagaggatcatccgcaatgccttacccatcggcagaatgcctataatgctgcgtagc
tccaactgtgtacttactgggaaaactccagcagaatttgccaaactaaatgagtgtcca
ttagatccaggtggctatttcattgttaaaggtgtagagaaagtcattcttattcaagag
cagttatccaaaaacagaatcattgttgaagctgatagaaaaggcacagttggagcttct
gttaccagttccactcatgagaagaagagcagaacaaatatggttgtgaaacaaggaaga
ttttacctgaggcacaacactctgtcagaagatattcccattgctatcatatttaaggcc
atgggtgttgagagtgaccaggagattgtacagatgattggcacagaggaacatgtgatg
gctgcatttgctcctagcctggaagaatgccaaaaagctcagatttttacacagatgcag
gcattgaagtacattggaaacaaagtacgacgacagaggatctggggaggcccaaagaaa
acaaagatggaagaagcccgagagctgctggcatcaaccattctgacccacgtgcttgtg
aaggaattcaattttcgtgccaagtgcatatacacagcagtgatggtacgcagagtaatt
ttggctcaaggagaaaataaagtagatgacagagactattatggaaataaacgtttggag
ctggcagggcagcttctttctcttctgtttgaagatttgttcaaaaaatttaactcagag
ctgaagaagattgctgaccaggtcatccccaaacagcgtgcagctcagtttgatgtcgtg
aagcacatgcgacaggaccagatcaccaatggcatggtcaatgccatctccacaggaaat
tggtctctaaagagattcaagatggaccggcaaggggtgacacaagtcttgtcgcgcttg
tcttacatctctgctctgggaatgatgaccaggatctcttctcagtttgaaaagacaagg
aaagtgagtggtcctcgatcactacagccatctcagtgggggatgctctgcccttccgac
actcctgaaggagaggcctgtggtttggttaaaaaccttgccctcatgactcatattact
acggatatggaagatggcccaattattaaattagccagtaatcttggagttgaagatgtc
aacttgctctgtggtgaagaactttcatacccaaacgtgttcctggtttttctcaatggt
aacatccttggtgtcatacgtgatcaccagaagttagtcaacacctttcggatcttgcgc
cgagcaggttatatcaacgaatttgtttccatctctacaaatctgtctgacagatgtgtc
tacatttcctctgatggagggagattgtgcaggccttacataattgtcaggaagcaaaaa
cctgcagttacaagcaagcatatggaagaactggctcagggctacaggaattttgaagat
ttcttgcatgaaggcctcgttgaatatttggatgtgaatgaagaaaatgactgtaacatt
gccctgtatgaaaatacaatcaataaagatacaacccatttggagattgagcctttcacg
cttctgggtgtctgtgctgggctgattccatatcctcaccacaaccagtccccaagaaac
acttaccagtgtgccatgggaaaacaagccatgggtactattggatacaatcaaagaaac
aggatagacactctgatgtatctccttgcctatccacagaagccaatggtaaaaacaaaa
acaatagaactgatagattttgagaaactccctgctggacagaatgccacagttgctgtg
atgagctacagtggctacgatattgaagatgctcttgtcttaaacaaggcctctttggac
agaggttttggaaggtgtcttgtgtacaagaatgccaagtgtacactgaagcgttacacg
aatcagacctttgataaagtgatggggccaatgctggatgcagctacccgtaaacccatc
tggcgccatgagattttagatgctgatggtatctgctctccaggtgaaaaagtagaaaat
aagcaagtccttgtgaacaaatctatgccaactgtgacccagacacctctggaaggaagc
agtgtgcctcagcagccgcagtacaaagatgtgcctgtaacctacaaaggtgctactgat
tcttacattgaaaaagtaatgatttcatcaaatgcagaggatgctttcttgatcaaaatg
ttgctgaggcaaaccagacgtccagaaattggagataaatttagcagtcgtcatgggcag
aaaggggtgtgtggactgattgttcctcaggaggacatgccattttgtgatacagggatc
tgcccagatatcataatgaaccctcacggcttcccatcgcgtatgacggtaggaaagttg
attgaactcctggctggaaaggctggggtgctcgatggcaaatttcactatggaacggct
tttggcggcagtaaagttaaggatgtgtgtgaagatcttattcgccacggttataactac
ctagggaaggactatgtcacatctgggatcactggggagcctttggaagcatatatttat
tttggtcctgtgtattaccagaaactgaagcacatggtgttggataaaatgcatgcaaga
gctcgaggacccagagcagtgctcaccaggcaacccactgaaggtcgatcccgtgatggt
ggtttacgtcttggagagatggaacgggattgtttgataggttatggagccagcatgctt
ttattggagagactgatgatttcaagtgatgccttcgaagtggatgtttgtgggcagtgt
ggcttgctggggtactctggatggtgccactactgcaaatcatcatgtcatgtgtcttct
ctgcgcataccttatgcctgtaaactcttattccaagagctgcagtccatgaacattatc
cctaggctaaaattagctaagtacaatgaatga
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