Cinclus cinclus (white-throated dipper): 134043708
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Entry
134043708 CDS
T10813
Symbol
CFAP54
Name
(RefSeq) cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccic03037
]
134043708 (CFAP54)
Cilium and associated proteins [BR:
ccic03037
]
Motile cilia and associated proteins
Sperm associated proteins
134043708 (CFAP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
fn3
Motif
Other DBs
NCBI-GeneID:
134043708
NCBI-ProteinID:
XP_062348340
LinkDB
All DBs
Position
4:complement(62981281..63082661)
Genome browser
AA seq
3140 aa
AA seq
DB search
MAEPAGPPAPAAGPQAPHAAFFGPVARGNPVVDSFEAELRRVLSALRRLRGAGQAEPPQH
DLHRHGANTLFNIWIKYKPRLPEWYYSERLVKVGDTLVQIKEYKLALLQCYERYLQQFVS
VNLDDVMGDVHRFKSTFFPNGVRENKAALTFHVLEARNVCIYQMVCNRDRNFQNRESLQT
CLNVLTSLRLTMQVALPQENLCWLIYNGTIHIYTICRHLMVVGQSAKVLEYLLWASICME
SSIPLLSVHYLTWRATLYTAVSQCYFDCHAGIHGEIFARRGLIKIGEVKQLEDISSLEHT
ETEKIFREATLKMPVMIFKRAVYASRRKSNSLRHEPKVNPRKAVNLSWPRTTTERLLVEM
FDGPAAQFLAILEALSESSRNLFPPHPPVPDEIEICGVTSELFSAGLEILSGGETNGTSQ
FGIINPSSSLLQLMLTGEKGVSGDAAVKFVKLAFSYEEWNVFYSALEFVDDFLQAQDDPI
WKKAEIELKLLTLMQPVVFPGKFECSFSISDYNSKEASTHQGSEKTIRKESFKPGDPFHD
LMILATTVLSCVSTPNQNVHPGREILVNAVMCLWQKCKPELQQIQMSGSDFLDYIHKPRA
YQWVHILWIMNEIIEKSNIADTNVMFAEITLCLAAILENAAEPASESEEKGGGSASLLQD
ETCDMPEILMKMPAEQLQIAYEILEKAINAMNTCRLMTLLPDGKSIFDNCCTKVYSNDQS
LNSVLGCDSDKTGTDNGFVTDLHLELIQAQHRVAVKLLKITQDAQVVGRSLKSSKSREKN
IEDFQYLSEELIMKKIKRNKLSRAIFLMQKAAQKFPEDLTTTSQTQLLEEALTLIEQVEA
EQSALYRSLKEAMSSKKKIKTPPPPLLLSRSHCSMTFKPAPFESDIQVSWYCILGSVAGG
SNTKVRLNSNKLQNSGEQIPADGKILLEVQGLDANEKYVFAVAAYSSDGKLIGDAVGQMT
KPILAYPPLSATTVRAYLTQVAYQTGNFKLARAAFSPMWDYFVSDSSPLPPNAAVISASS
NLTISEKRLRFEAVSQTSPVTLHLFLRNIFAVSDINVMEGALFCDSICSNEIFYKEQVAR
LAECERMTVAIELSNWLNHASYTLQSVVQCYGLLAPLIYHKIFSVPVVQILIKCLAVLQE
IPSATLQKRQEGCYESIQHMIACTSYHTAKVLHSWKEYDLAVIIINYGKKLLISPAVSPS
LSGVKTGETHTRKENCSSRTSHLAAMAKAAENLSTLESSLLKLTEPGPGTQLTGKEGPLS
LYPVISCWTSERAYREVLKVRGQTRFLEFFVQLLHKVLNEEKFQCVLEWADGVEDYMKRR
NENFLGTDGISAQARFLTLGESTNAADVEKGKDTSVSMKPKASPSKKPVKKAIPKNGPLR
EYLMKNPDAMNSPEAQKKGKDKLKKLAHQTLVMLLSKYVTRSKFCQMCLEEMPWKSQMNI
YLAVAHYHLFKKNLEEQYNIGISGSQHLDSYNILDPEIFSLSNSGTVLAREAVEDNIGKP
TPRLLEKSDVTETQTFKSPKNRNKQSQTSQSRSAKTPEEQDQFPSNTLLLKHFKSIFLHL
KRAVVLAHRGGYWTLLQNACRELWNYTQEFQWIANQSHSRMDAFPITWDFLWNTIWLPFY
FASDMIIDMIIDLQESSSLKIVDPEGDFCIPSCLGSIVDENGGSNLHPQPPLDDVNVVDL
RWICNLILKTIEVLYQMKKWEALVHIAVQFNIFTHERFTEQVSPLLVYAQRQLLERIQQF
SGPDSHESHFTKHLSADAQKMSCRNYIGYKLQLPIARSASEGVFPGCSFDPETSNDSTDN
NQAKALVCVPLDVNDTLKCFREALEKSKYQSRALRHSRKLLSLFLAHTQENAGRAISSHI
SSSRKLKFNVGDEVIFLPTPCDLSKEKYNFSSVVESRRIPKSQLSVIISSYEQTIGVLEM
NNQRDLKVQALHELGNLHFYSGNKRAAFKYWCQALDETLNIADALNTWEELSFPKDATDC
FSVGRSTDMSQKFLSQAGAWGCLHAAVLVAKIAQYITTSQMRLREKYCYFSAILFKSLFR
ASLPHPTSDYDFVQYETNILIPGIDLFSDRYRADISTVVASLNFIMFELHCAKQNLIILP
LFTLYQYIVSEICKDPAKCIEGRILKIKVLTDIGFFTEAFHELSLLILGERIPWKIPSGY
RYTEQMQILQKFDSSKPLITATNLQVLEDAFNWSLSLTVVPLCNQQIMNKLTLAKMHLII
CLSATINNIPEKVEKVVYSVDNSSLPEPNKTTASTVKVDADQNSRQQEQRDRMVHLVDCK
DELNMAMLKGILLTEAEGSLSYLVQNIQEKYDGDISRYSVEDLEAIIEAKLELASVSLQR
HQAALSVALAFSAIRLLQDAKVFSMDVAHFQEKKDERECLESTTEGVQLPSHVTAQGHVN
VRLWLRCRATLVTALVTQIHGVGDMKGNDVAERRSVIKEVISEAEAFGDIETQAEVMVQA
AILDLQERRPVADIKLLLQKIIGLLQGDTFISLPASLTLVKSMLLLADILPLQIVEDSEH
CSSAEEPLNLLALAHELTIKAIFDCGEPVEQQIEDSTLSCLALPTKNIYLPHINLLAQVK
MKIGHTLAEKVASTATRDNLQWLRALRHLESALNLCRASATKKLDLEAELLFQIGKTERQ
ITEKGNNKSSPAVETLLEAIKISQQYDQKYELIKQSYLEIALSYLYFARNNEDLSQTDEF
VPSKSSSSSGERSSEEALKSEVYQVQAWVAIRAASQVSEAMLASQLLIGMKSVKEENMKD
EVQKKIPEFAAMDLFSSYRDFISVADGYNVVPETPEVPSTENKQTTGDCQSGIEGTESFV
TKTSQKKDTITWVHMIRYHNHLKRIYSTNLSGPGSLFARHGHLGLISDTGIVLRIAEMHS
FLEKNLFEYSMCCLENFPVELHDAEEPLSSQTDSSEMSLEFSDIISEVSHVRTASPVSVI
AEECERTESKAARAPDKEISIQWYIPSVAKPSKDTETKILLLYAYNTNPVVIGDIAIFST
SVFSGHLWIPLARIISLREKLSDLKKQVEILMRGSKSFSNSIPTSFLEQSEALKISPSNK
PKMSDAKVDLDEKTEEIAKRCLSEVKALLSVGPTPSSPLTEIPFDVTLQSITNLEDMFDL
ANGCILTEGNILDWIISLLH
NT seq
9423 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacccgccgggcctcccgcccccgccgccggcccgcaggccccgcacgccgct
ttcttcgggcccgtggcgcggggcaacccggtggtggacagcttcgaggccgagctgcgg
cgcgtcctcagcgccctgcggcggctgcgaggcgcggggcaggccgagcctccgcagcac
gacctgcaccgccacggagcaaatactttgtttaacatttggatcaaatacaagccacga
ctaccggagtggtattacagtgaaagacttgtgaaagttggtgacactcttgttcagatc
aaagaatataagttggcacttttacagtgctatgaaagataccttcagcagtttgtttct
gtaaaccttgatgatgtcatgggtgatgtgcaccgctttaaatccaccttttttccaaat
ggtgtcagagaaaacaaggcagcacttacgttccatgttttggaagcgagaaatgtttgc
atttatcagatggtttgcaacagagacagaaattttcagaatcgagagtccctgcagact
tgtctcaatgtcttgacctcattacgactcactatgcaagtggctctacctcaggagaat
ttgtgttggcttatctacaatggtactatccatatttacaccatatgcagacatttgatg
gtggtgggtcagtctgctaaggtcctggaatacttactgtgggccagtatctgtatggaa
tcatccattccactcctatctgtgcattatttgacatggagagccactctatatacggca
gtttctcagtgttattttgattgtcacgctggcattcatggagagatatttgctcgccgt
ggtttgattaaaattggagaagtaaagcaattagaagatatcagttctctggaacataca
gagacagaaaagatttttagagaggccactctaaagatgccagtaatgattttcaagaga
gcagtatatgcatccagaagaaagtcaaacagtttgcgacatgagccaaaagttaaccca
aggaaagcagtaaatttgtcatggcctcgcaccactaccgagcggctgctggtggaaatg
tttgatggtcctgcagctcagttccttgccatcttggaagcactgtcagagagtagcagg
aatctatttccccctcatcctcctgttcctgatgaaattgaaatttgtggtgtcacttct
gagcttttttctgcaggcctagaaatcctttcaggtggagagaccaatggcaccagtcag
tttggtataattaatccatcatctagtcttctgcagttgatgctaacaggagaaaaaggg
gtgtctggagatgctgctgtgaaatttgtaaagttagctttcagctatgaggagtggaac
gtgttttattctgctcttgaatttgttgatgattttcttcaggctcaagatgacccaata
tggaagaaagctgaaatagaactcaaacttcttacattgatgcaacctgtagtattccca
ggaaaatttgaatgtagtttctctattagtgattataatagcaaagaagccagcacacat
caaggttctgaaaagacaattagaaaggaatcctttaagcctggagatccttttcatgat
ctcatgattttggcaacaacagtgctttcctgtgtctccacacctaaccagaatgtccat
cctggcagagaaatacttgttaatgcagtaatgtgtttgtggcagaaatgtaaaccagaa
cttcagcaaatccaaatgagtggaagtgacttcttagactatatccacaaaccccgagct
taccaatgggttcatatactctggataatgaatgaaataattgagaagagcaacatagca
gacactaatgtgatgtttgcagagataaccttatgtctagctgcaatattggaaaatgca
gctgaacctgcaagtgaatctgaggaaaaaggaggaggaagtgcttctcttttacaagac
gaaacctgtgatatgcctgaaatactgatgaaaatgcctgcagaacaattacaaattgct
tatgaaattcttgaaaaagcaattaatgccatgaacacatgtcggttaatgaccctttta
ccagatggaaagtcgatatttgacaactgctgtacaaaggtgtattcaaatgatcagagt
ttgaattctgtattgggatgtgacagtgataaaacaggaacagataatggttttgtgaca
gatttacacttggagctcattcaggcccaacatcgagtagcagtgaaacttcttaaaatt
acacaagatgctcaagttgttggcagaagtcttaaatctagtaagtctcgtgagaaaaat
attgaagatttccaatatttatcagaggaacttataatgaaaaaaattaaaaggaataag
ctatccagagcaatctttttgatgcaaaaggctgcacaaaagttccctgaagacttaact
actacttcccaaacgcagctactggaggaagcactaactttaattgagcaagttgaagct
gaacaaagtgcattgtatcgcagtctcaaagaagctatgagcagcaagaaaaaaatcaag
actcctcctcctcctctgttactttctagatcacattgctccatgacatttaaaccagcc
ccatttgaatcagatattcaggtttcatggtactgtattttgggctctgtagcaggagga
agtaataccaaagtaaggttaaatagcaataaacttcaaaattcaggagaacagataccg
gcggatgggaaaattctcttagaagtgcaagggttagatgccaatgaaaaatacgtattt
gctgtcgcagcatattcttcagatggaaaacttattggggatgctgttgggcaaatgact
aagccaatccttgcctatccacccctttctgctactactgttcgagcatatctaactcag
gtagcctatcagacgggcaactttaaattagccagagcagcattttcacccatgtgggat
tactttgtttcagactcttctccactgcctcccaatgcagctgtcatttctgcaagtagt
aatttgactatatctgaaaaaaggttacgttttgaagctgtatctcagacttctcctgtt
accttgcacctctttttgaggaatatatttgctgtttctgacattaatgtcatggaagga
gcgctcttctgtgattccatctgttccaatgagatattttataaggagcaagttgctaga
ttagcagaatgtgaaagaatgactgtggcaattgaacttagcaactggttgaaccatgcg
agttacaccctgcagtctgttgtacaatgctatggcctcctggccccacttatttatcat
aagattttttcagtgccagtagttcagatcctcattaaatgcttagctgttctccaagaa
attccaagtgctactttgcaaaagagacaggaaggatgttatgagagtattcagcatatg
atagcctgtacttcatatcatacagcaaaggtactacattcatggaaagagtatgatctt
gcagtaattatcattaactatgggaaaaaattgttgatctcaccagcagtttcacccagt
ctgtcaggtgtgaaaactggagaaacacacactcgcaaagagaactgttcctcaaggaca
tcccatttagctgcaatggcaaaagcagcagaaaatctgagtactcttgaatcaagtctc
ctcaaactgacagaaccaggtcctggaacacagcttacaggaaaggaaggtcctttgtcc
ctctaccctgtaatttcatgctggacatcagagcgtgcttatcgagaagtgcttaaagtc
agagggcaaacacgtttccttgagttctttgttcaacttttgcacaaagtcctgaatgaa
gagaagtttcagtgtgttctggagtgggcagacggggtagaagattacatgaaaaggagg
aatgagaacttccttggtactgatggaatttcagcacaagcaagatttctcactctggga
gaaagcacaaatgctgcagatgttgagaaaggaaaggatacctcagtttcaatgaaacca
aaggcatcaccttcgaagaaacctgtgaaaaaagccatacctaagaatggacctcttaga
gagtatttaatgaaaaatccagatgcaatgaattctccagaagcacaaaagaaaggcaag
gataagttgaagaaattagctcatcaaaccttagtgatgctgctgagtaaatatgtaacc
cgaagtaagttttgtcaaatgtgtcttgaagagatgccctggaagtctcagatgaatatc
tatctggcagttgcacactaccacttatttaaaaagaatctggaggagcaatataatatt
ggaattagtggttcacagcatctggacagttacaatattttggatcctgagatattctca
ttaagcaattctggcactgtactggcgagagaagctgtagaggataacataggaaaacca
actcctcgtctccttgaaaagtcagatgtgactgaaacccaaacctttaagtctcctaag
aacagaaataaacagagtcaaacttctcaaagtcgatcagcaaagacccctgaagagcag
gaccagtttccatcaaatacccttttgctgaagcattttaaaagcatcttcttgcatttg
aaaagagcagtggttcttgctcaccgtggtggctactggacattacttcaaaatgcttgt
cgagaactttggaactatactcaagaatttcaatggattgctaaccagtcacattcccgt
atggatgcatttcccatcacctgggattttctttggaacaccatctggttgccattctat
tttgcatcagacatgatcattgatatgataattgacctacaagaaagcagttctcttaag
attgtggatcctgaaggagacttttgcattcccagttgtttaggaagtattgtggatgag
aatggtggttctaatcttcatccccagcctcccctggatgatgtgaatgtggtcgatttg
agatggatatgtaatctgattcttaaaacaatagaagtgttatatcaaatgaagaagtgg
gaagcactggtacacatagctgtacaatttaacatatttacacatgagaggttcacagaa
caagtgagtccactgctggtgtatgctcagaggcagctgctggaaaggatacagcagttc
agtggcccagacagccatgaatctcatttcacaaaacatctctctgctgatgcacagaag
atgagttgcagaaactacatagggtacaaattacagctgcctattgctcgttctgccagt
gaaggggtttttcctggatgctctttcgatcctgagacaagtaatgattctacagataac
aatcaagcaaaagccctagtttgtgtgcctcttgatgtgaatgataccctgaaatgtttt
agagaagctctagaaaaatctaaatatcaaagcagagcactgagacacagcaggaaacta
ctttcattatttcttgcacacacacaagaaaatgctggaagagcaatcagcagtcatatc
tcttcaagcagaaagctgaaatttaacgtgggagatgaagtgatatttctaccgacacca
tgtgacctttctaaagaaaaatacaatttctccagtgtggttgagagtagacgaatacca
aagtcacagctttcagtaattatctcttcctatgaacaaacaataggcgtccttgaaatg
aataaccagagagacctcaaggtacaggctctacacgaacttggaaatcttcacttttat
tctggaaataaaagagctgcttttaaatattggtgtcaagcccttgatgaaacactcaac
attgctgatgctcttaacacctgggaagagttaagttttccaaaagatgctacagactgc
ttttcagttggaaggtcaactgatatgagtcagaaatttctttctcaggctggagcttgg
ggatgtttacatgcagcagtcctagtggctaagatagctcagtatataacaacatcacag
atgagattaagagaaaaatactgctatttttctgcgatactttttaagagcctgtttaga
gcttctcttccacatccaacatctgactatgactttgtacaatatgaaacaaatattctt
attcctggtattgacctgttctctgatcgctacagagctgatatctctactgtagttgca
agtctgaatttcattatgtttgaactacattgtgcaaaacaaaatttaataattttacct
ctgttcacattataccaatatattgtatctgagatttgtaaggacccagctaaatgtatt
gaaggaagaatcctaaagattaaagtacttacagatataggattttttacggaggccttt
catgaactgtctttgcttattttgggagagagaattccatggaaaataccatcgggatac
agatacactgaacaaatgcagatcttacagaaatttgattcctcaaaacctctcataact
gctacaaatttgcaggtactggaagatgcatttaattggagtctgtctttaacagtggtg
ccactgtgcaaccaacaaattatgaataaattaaccttagccaaaatgcatctcatcatt
tgtctttctgccacaataaataatatacctgaaaaagttgaaaaagttgtgtattctgtt
gacaacagcagcttgccagagccaaacaaaactacagcatcaactgtaaaagttgatgct
gatcagaattcaagacaacaggaacaaagagacagaatggtgcatcttgttgactgtaaa
gatgaattaaatatggccatgctgaaggggattttgttgacagaagctgaaggaagtctt
agttatcttgtacagaacatacaggagaagtatgatggggacatatctcggtattctgtg
gaagatttagaggctattattgaggccaaacttgaacttgcctctgtttctctgcaaagg
catcaagcagctctcagtgttgctttggctttctctgcaattcgacttctccaagatgca
aaagtttttagcatggacgtggcacattttcaagaaaaaaaggatgaaagggagtgtttg
gagtccaccactgaaggtgttcagctcccttcccatgtaacagcacaagggcacgtgaat
gtacgtttgtggctgaggtgtcgagcaacattagtgactgcactcgtgacacagatacat
ggtgttggtgatatgaagggaaatgatgtggctgagcgcagaagtgtgataaaagaagtt
atatcagaggcagaagcctttggtgatattgagactcaggctgaagtgatggtgcaagct
gctattcttgacctgcaagaaagacgtcctgtggcagacattaaacttcttctgcagaaa
atcatcggtttactccaaggggatacatttatttccctgccagcttccttgactcttgtg
aaaagtatgcttctgctggcagacatactgcctctgcaaatagtagaggattcagaacat
tgctcttctgcagaggaaccattaaacttgcttgctttggctcatgagcttaccattaaa
gcaatttttgattgtggtgaacccgttgaacagcaaatagaagacagtacattgagttgc
ctggccttacccacaaagaatatctacctgccacatattaacttgctagcccaagtcaaa
atgaaaattggacatacattggctgaaaaggtagcttctacagctacaagagataacttg
caatggctacgtgctctcaggcatttagaatcagcattgaatctttgcagagcatctgca
acaaaaaaattagatttggaagctgaacttctttttcagataggtaagacagaacgccag
ataactgaaaaaggcaataacaagtcatctccagctgttgaaaccctgttggaagctatt
aagatcagccagcaatatgatcaaaaatatgagttaataaaacagtcataccttgaaata
gcactatcatatttgtattttgccagaaacaatgaggatctttcacagacagatgagttt
gtgccttccaaatcaagtagctcttctggagaacgatcttctgaggaggctctgaaatca
gaagtctaccaagtacaagcctgggttgcaataagagcagcttcacaggtcagtgaagct
atgcttgcttctcagctgttaattggaatgaagagtgttaaggaagagaacatgaaggat
gaagtgcaaaaaaaaatcccagaatttgctgctatggatcttttttcttcgtacagagat
ttcatatctgttgcagatggatacaatgttgttcctgaaactcccgaagtaccttctact
gaaaacaaacaaaccacaggagactgtcagagtggaattgaaggaacagaaagttttgtc
accaagaccagtcagaagaaagatacaataacatgggttcacatgattcgctaccacaat
catttaaaaagaatttatagcacaaacctatcaggacctggatcactttttgcaagacat
ggacaccttggtttgatttctgacacaggaattgttctacgcatagcagaaatgcattcc
ttccttgaaaagaatttgtttgaatattcaatgtgttgtcttgagaattttccagtagaa
ctacatgatgcagaagaaccactcagtagtcaaacagattcttcagagatgtctcttgaa
ttttctgacattatatcagaagtgtcacatgtaagaacagcttctccagtttctgtcatt
gcagaagaatgtgagcggacagagagtaaggcagcaagagctccggataaggaaatcagc
attcagtggtatattccttctgtggcaaagccatcaaaggatacagaaactaagattttg
ttgctttacgcttataatacaaaccctgtcgtgattggcgacatcgcgatttttagtacg
tctgtattttcaggccacttgtggattccattggctagaattatttctttaagggagaaa
ttgtctgatctgaagaagcaagttgaaatattgatgcgaggttctaagagcttttcaaat
tcaatacctacaagctttcttgagcaaagtgaagctttgaaaataagtccttcaaataaa
cccaaaatgagtgatgcgaaagtggatcttgatgaaaaaacagaagaaattgctaaaagg
tgtttatctgaagtcaaagcactgctgtctgttggtccaactccatcttctccattaact
gagatcccatttgatgttactttgcagtcaataacaaatttggaagatatgtttgatctt
gccaatggatgcatactgactgaaggaaatattttagactggatcatttctctgcttcac
taa
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