Cinclus cinclus (white-throated dipper): 134043932
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Entry
134043932 CDS
T10813
Symbol
SCRIB
Name
(RefSeq) protein scribble homolog
KO
K16175
protein scribble
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
134043932 (SCRIB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
134043932
NCBI-ProteinID:
XP_062348705
LinkDB
All DBs
Position
1:152136889..152232230
Genome browser
AA seq
1779 aa
AA seq
DB search
MLRCMPPLWRCNRHVEALDRRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLL
NLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSR
LPEGFTQLRSLGHLALNDVSLQSLPTDIGNLANLVTLELRENLLKTLPTSLSFLVKLEQL
DLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKLEQLPNEV
SGLVALTDLLLSQNLLECIPDGIGQLKQLSILKVDQNRLTDMTESIGDCENLSELILTEN
MLTALPKSLGKLAKLTNLNVDRNRLTALPAEIGGCANLNVLSLRDNRLALLPPELANTTE
LHVLDVAGNRLQNLPFALTNLNLKALWLAENQSQPMLKFQTEDDEKTGEKVLTCYLLPQQ
PSPSLAPTVLSSSPENLLQNSVDESWTDTNLNRVSVIQFLDEPKGDDDEESGGLQRRATP
HPSELKVMKKVIEVRRNEVNAARADANPSSPSSDEKRLSATSNRSEDSHLSTSTASVEGR
AEDRERGWPNGQVPDLRDLDKQVKAKEEEERKEAAEQEEEDAEVEYNEPTVHFAEDTLIR
SEDEDEDEERPFPVEKQRLIRKDTPHYKKHFKITKLPKPEAVVALLQGLNSDGVPKEEEE
LGGCNSNTEPRDQEEAWDEDDRKNGALSAQPSVKGVSFDQANNLLIEPARIEEEELTLTI
VRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVSLHCA
EHHVAVEALRGSGSSVSMTVLRERMVEPENAITVTPLRPEDDYSPRERRGGLRFPESPEA
APATERFSTCLMRNEKGLGFSIAGGKGSTPYRAGDMGIFISRIAEGGAAHRDGILHVGDR
VISINGVDMTEARHDQAVALLTAASPTIVLLVEREGAEQPGEGGSPRGRMHSPPPPGPGD
SHSPPEDTAPRNHLCKGLEDQYPVEEIHLVKAGGPLGLSIVGGSDHSSHPFGIHEPGVFI
SKVIPRGLASRSGLRVGDRILEVNSIDLRHATHQEAVNALLSNAQELTMVVRRDPPPPGM
QEICIEKAPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSSGAAARDGRLKVGMRIL
EVNHQSLLGMTHTEAVQILRGVGDALLVLVCDGFDPKAAAAIEMSPGIIANPFAAGIGRK
NSLESISSIDRDLSPEELEILQKEMEMVREATQWEREEMEKVTVPSEPLRLDYRTLAALP
SSGLQRGNRAAPVGDSGTGNSRRESPYSPSNPQVPAAPRPAHLAGRETRFASINFITSQD
DSKSTKPGVIQPLSRVRPSAASHRSEEGDSPNPFQQPEPCFRIHSSHKPRPPSPPSPDEV
PINVKQAYKTFAAVPLSHPLLGTQELSGQSSTENSKMALEVAAHSPGGQHSPEQRSFRER
QKYFEIEVKQQHLDKPPKRVSLVGEDDLKKMKEEEARKLQQQRALLLEEEAEEDEEVRQV
PEAVQSSVIIEGVEYKVERLNGRSIPAPAARPLELSENSSSQRNSLEEGIKSEQRTNSMS
GLSPLLAEPGAPVRTAKAERRHQERLRMQSPELLSTQDKDKDKELSPAERRALEAEKRAM
WRAARMKSLEQDALKAQMVIAKSKEGKKRSTLEQLAESPSPAPTPSPTPLEDCSPRNVTS
PGRLSMSEKKFDYREFAAIPSSKPVYEIQSPDAADDLRYVGDRHSSVPREQDGQPEEEDT
LGTRDPSAPAPSALEDMALYSSKRKLRHSRRSLETAVPT
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctgcatgccgccgctctggcgctgcaaccggcacgtggaggcgctggaccgg
cgacactgctcgctgcaggccgtgcccgaggagatctaccgctacagccgctcgctcgag
gagctgctgctggacgccaaccagctccgagagctgcccaagcctttcttcaggctgctg
aacctgcgcaagctgggcctgagcgacaatgagatccagaggcttccccccgaggtggcc
aacttcatgcagctggtggagctggacatctcccgcaatgacattccagaaattcctgaa
agcatcaaattctgcaaatccctggaaatcgcagacttcagtgggaatcctctctccagg
cttcctgagggcttcacgcagctccgaagcctgggccacttggccttgaatgatgtgtcc
ctgcagagcctccccactgacattgggaatttggcaaacctggtgactttggagctacgt
gagaacctgctaaagactctccccacttcactctccttccttgtcaagttagagcagttg
gatctcggtggcaatgacctggaagtactgccggacactctgggtgcgctcccgaacctg
cgggagctctggctggaccggaaccagctctcggcactgccgccggagctgggcaacctg
cgccgcctggtgtgtctggatgtgtctgagaacaagctggagcaattgcccaacgaggtc
agcgggctggtggcgctgacggacctgctgctgtcccagaaccttctggaatgcattcca
gatggcatcggtcagctgaagcagctctccatcctcaaggtggaccagaaccggctgaca
gacatgacagaatcaattggggactgtgaaaatctgtctgagctcatcctgactgagaac
atgctgactgccttgcccaaatccctgggcaagctggccaagctgacgaacctgaacgtg
gaccggaaccggctgacggcgctgccagcagagattgggggctgtgccaacctcaatgtc
ctgtccctgcgggacaaccgcctggccctgctgccccctgagctggccaacaccaccgag
ctccacgtcctggatgtggctgggaacaggctgcagaacttgccctttgctttgacaaat
cttaatctgaaagccctgtggctggcagaaaaccagtcccagcccatgctgaaatttcag
accgaggatgatgaaaagacaggagaaaaggtcctcacttgctacctgctcccccagcaa
ccctctcccagcctggctcccactgtgttatcttcctccccagagaaccttctgcagaac
agcgtggatgagagctggacagacaccaacttaaacagagtcagtgtgatccagttcctg
gatgaacctaaaggagatgatgatgaggagtctggaggcctgcagcgccgagccacccct
caccccagtgagctgaaggtgatgaagaaggtgatcgaggtccggcgcaacgaggtgaac
gctgcgagggctgatgccaaccccagctctcccagctcagatgagaagaggctgagtgcc
acatccaatcgcagtgaggactcccacctgtccaccagcacggcctctgtggagggcagg
gcagaggacagggagcggggctggcccaacgggcaggtgcctgacctgcgggacctggac
aagcaggtgaaggccaaagaggaagaggagcgcaaggaagctgctgagcaggaggaggaa
gatgcggaagtggaatacaatgagcccactgtacactttgctgaggacacgctgataagg
agtgaggatgaggatgaggatgaagagcgaccattcccagtggagaagcaaaggctcatc
cgcaaggacacgccccattataagaaacacttcaagatcactaaactgcccaagccagag
gcagtggtggcacttctgcaggggctgaacagtgatggggtccccaaagaggaagaggag
ttgggaggctgcaatagtaacacagagcccagggatcaggaggaagcatgggatgaggat
gacagaaagaatggagctttgtctgctcagccatccgtgaagggggtgtcgtttgatcaa
gccaataatctgctgattgaacctgctcgcattgaggaggaagagctgaccctgaccatc
gtgcggcagacgggggggctgggcatcagcatcgcggggggcaagggctccacgccctat
aagggggacgatgagggcatctttatttcccgtgtgtctgaggagggtcctgcagctcgt
gcaggggtccgtgttggcgacaagcttctggaggtgaacggcgtgtccctgcactgtgcc
gagcaccacgtggccgtggaggctctgcggggctcggggagctcggtgtccatgacggtg
ctgcgggagcggatggtggagccagagaacgccatcaccgtcacccctctgcgccccgag
gacgattacagcccccgggagcggcgcggggggctgcgcttccccgagagccccgaggca
gcaccggccaccgagagattctccacctgcctcatgcgcaatgagaagggcctcggcttc
agcatcgctggtggcaagggctccactccttaccgggctggagacatggggatcttcatc
tcccggattgcagagggtggtgcggcccaccgggatgggatcctgcacgtcggagaccga
gtcatctcgatcaatggggtagacatgacagaagccaggcatgatcaggccgtagcgctg
cttaccgcggcctcccccaccatcgtgctgctggtagagcgagagggcgcggagcagccc
ggcgaggggggctcgccccggggccgcatgcactcccccccacccccaggccccggggac
agccacagcccgcccgaggacacggcgccgaggaaccacctgtgcaaagggctggaggat
cagtaccctgtcgaggaaattcacctggtcaaagcaggtggtcccctgggcctcagcatc
gtcggaggcagtgaccattccagtcatcccttcgggattcatgagccaggtgtcttcatc
tccaaggtcatcccgcgggggctggcgtcgcgcagcgggctccgcgtaggggacaggatc
ctggaggtgaacagcatcgacctgcgccacgccacgcaccaggaggctgtgaatgcactg
ctctccaacgcccaggagctcaccatggtggtccgcagggaccctcctccacctgggatg
caggaaatatgcattgaaaaggctccaggagagaagctgggcatcagcatccggggtgga
gcaaagggccatgctggcaatccatttgatcccactgatgaaggcatcttcatctccaag
gtgagctcctccggggctgctgcccgggacggccgcctgaaggtggggatgaggatcctg
gaggtgaaccaccagagcctgctgggcatgacgcacacggaggccgtgcagatcctgcgg
ggcgtgggcgacgcgctgctcgtgctggtctgcgacggcttcgaccccaaggctgcggct
gccatcgagatgtccccaggaatcattgcaaacccttttgctgctggcattgggcgcaag
aacagcctggagagcatctcctccatcgaccgggatctgagccccgaggagctggagatc
ctgcagaaggagatggaaatggtgagagaagccactcagtgggagagagaagaaatggag
aaagtgactgtccccagtgaacccctgcgcttggactaccggaccctggcagcgctgccc
agcagtggcctgcagagaggcaaccgtgctgctcctgtgggcgactctgggacaggaaat
tccaggcgtgaatccccctattctcccagtaatccacaggtgcccgcagccccccggccc
gctcacctggccggcagggagacgcgctttgcttccattaacttcattacatctcaggat
gacagtaaatcaaccaagcctggcgtcattcagcctctgtcccgcgtgcgaccgagcgct
gcatcccacaggtcagaggagggggacagccccaaccccttccagcagcccgagccctgc
ttcaggatccacagctctcacaaaccacggccaccgtcgccaccctcccctgacgaggtc
cccatcaatgtcaagcaggcctacaagacgtttgcagcagtgcccctgtcccaccctctg
ctcgggacacaggaattgtctggtcagagcagcacagaaaatagcaaaatggccttggag
gtggctgcacacagccctgggggacagcacagccctgagcaaagatctttccgtgagagg
cagaagtattttgagatcgaggtgaagcagcagcacctggacaagcctcccaagcgtgtg
tccttggtgggggaagacgacctgaagaaaatgaaagaggaggaagcccgcaagctgcag
cagcagcgagcccttctgctggaggaggaagctgaggaggatgaggaggtgaggcaggtt
cctgaggctgtgcagtccagtgtcatcatcgagggtgtggaatacaaggtcgagaggctg
aatgggaggagcatcccggctccagcagctcggcctttggagctcagtgagaacagcagc
tcacagaggaattccctggaagaggggatcaagtctgagcagagaaccaactccatgtcg
gggctgagccctttgctggcggaaccaggcgctcccgtgcgcacggccaaggccgagcgg
cggcaccaggagcggctgcgcatgcagagcccggagctgctcagcacccaggacaaggac
aaggacaaggagctgtccccagcagaacgccgggctctggaggcagaaaaacgggccatg
tggagggcagcacggatgaaatcactggaacaggatgctctcaaagcacagatggttatt
gccaagtccaaggaggggaagaagcgcagcacactggagcagctggcagagtccccttca
cccgctccgacgccgtctccaacgccgctggaagattgcagccccaggaatgtcacttcc
ccaggaaggctgtcaatgtctgaaaagaagtttgactaccgggaatttgctgctattcct
tcctccaaacctgtttacgaaatccagtcacctgatgcagctgatgacctcagatacgtt
ggtgacaggcacagctcagttccccgggagcaggatgggcagccagaggaagaggacaca
ctgggaacacgggatccatcagcaccagctccctcagccctggaggacatggccctgtac
agcagcaagcggaagctccggcacagccggcgcagtctggagaccgctgtccccacatag
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integrated database retrieval system
