KEGG   Cinclus cinclus (white-throated dipper): 134044000
Entry
134044000         CDS       T10813                                 
Symbol
RAPGEF2
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
  KO
K08018  Rap guanine nucleotide exchange factor 2
Organism
ccic  Cinclus cinclus (white-throated dipper)
Pathway
ccic04010  MAPK signaling pathway
ccic04530  Tight junction
Brite
KEGG Orthology (KO) [BR:ccic00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    134044000 (RAPGEF2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    134044000 (RAPGEF2)
SSDB
Motif
Pfam: RasGEF RasGEF_N RA cNMP_binding PDZ PDZ_6 RA_2 PDZ_2 ABhydrolase-like_N
Other DBs
NCBI-GeneID: 134044000
NCBI-ProteinID: XP_062348864
LinkDB
Position
5:42564902..42746603
AA seq 1650 aa
MASYVDNSFRQAVMKNPAERSPQDLEIVYSYLHGMEALSNLREHQLRLMCETVRYERHEA
NEVLYYPDDIGTCWYILLSGSVFIKESMFLPRSSFGKRSAGSFRRGCECIVLEPSEMIVV
DYMEENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPVGKPPLPRGYHTECTKP
QLPADFTKLHLTDSLHPQVTHVSSSHSGCSITSDSGSSSLSDIYQATESEAGDMDLSGLP
ETAVDSEDDDDEEDIERASDPLMSRDIVRDCLEKDPIDRTDDDIEQLLEFMHQLPAFANM
TMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPDGRTEILCMGNSF
GVSPTMEKEYMKGVMRTKVDDCQFVCIAQQDYCRILNQVEKNMQKVEEEGEIVMVKEHRE
LDRTGTRKGHIVIKGTAERLTMHLVEEHSVVDPTFIEDFLLTYRTFLSSPMEVGKKLLEW
FNDPSLRDKVTRVVLLWVNNHFNDFEGDPAMTRFLEEFENNLEREKMGGHLRLLNIACAA
KAKRRLITLTKPSREAPLPFILLGGSEKGFGIFVDSVDFGSKATEAGLKRGDQILEVNGQ
NFENIQLTKAMEILRNNTHLSITVKTNLFVFKELLTRLSEEKRNGAPHLPKIGDIKKASR
YSIPDLAVDVEQVIGLEKVNKKSKANTVGGRNKLKKILDKTRISILPQKPYNDIGIGQSQ
DDSIVGLRQTKHIPPALPVSGTLSSSNPDLLQSHHRILDFNTTPDLPDQVLRVFKADQQS
RYIMISKDTTAKEVVIQAIREFALTATPDAYSLCEVSVTPEGVIKQRRLPDQLSKLADRI
QLSGRYYLKNNMETETLCSDEDAQELLRESQISLLQLSTVEVATQLSMRNFELFRNIEPT
EYIDDLFKLKSKTGCTNLKRFEEVINQETFWVASEILRETNQLKRMKIIKHFIKIALHCR
ECKNFNSMFAIISGLNLAPVARLRTTWEKLPSKYEKLFQDLQDLFDPSRNMAKYRNVLNS
QNLQPPIIPLFPVIKKDLTFLHEGNDSKVEGLVNFEKLRMIAKEIRHVGRMASVNMDPAL
MFRTRKKKWRSLGSLSQGSANAAVLDVAQAGGHKKRVRRSSFLNAKKLYEDAQMARKVKQ
YLSNLDLEMDEESLQMLSLQCEPATNTLPKNTGDKRSGKSETSPVAPRAGIQQKVQQQHK
VNQALQVPAVSLYPSRKKVPVKDLPPFGINSPQALKKILSLSEEGSLDRHKKQSEDTVSS
ASSQLSSPPTSPQSSPRKGYSLAPSSTVDNFSDSGHSEISSRSSIVSNSSFDSMPVSLHD
ERRQRHSVSIVETNLGVGRIDRRIMIEPDQYSLGSYAPLSETRGLYAGATVLSSPSTEEL
SQDQGDRASLDAADSGRGSWTSCSSGSHDNIQTIQHQRSWETLPFGHAHFDSSGDGAGLW
ASGGHVDQLMFPDHGTKYGKQSQGREGLDQAQSRASWASSTGYWGEDSEGDTGTIKRRGG
KDVSIEAETSSITSAPAEETKPAPIPAHTAAASSSTKGLVARKEGRYREPPPTPPGYVGI
PIAEFAEGGSHPTRKPPDYNIALQRSRMVARTCETHGTATPQQQSHSHSTGRPVNKPQWH
KPNESDPRLAHYPTQGFSTEEDEDEQVSAV
NT seq 4953 nt   +upstreamnt  +downstreamnt
atggcgtcctacgtggataacagcttccgccaggcggtgatgaagaacccggcggagcgg
agcccccaggacttggagattgtgtattcatatttacatggaatggaagcattgtctaat
ctgagagagcatcagctaagactgatgtgtgaaactgtcagatatgaaaggcatgaagca
aatgaagtgctgtactaccctgatgatattggtacctgttggtatatcctgctgtctggt
tcagtcttcattaaagaatccatgtttcttccaaggagcagtttcggcaagcgttctgct
ggcagcttcagacgtggatgtgaatgcattgttttagagccatcagaaatgattgtggtt
gattacatggaagaaaatgaggaatatttccagcgtcaagcatctcacaggcaatctcga
agaagatttaggaaaatcaaccagaaaggggagcgacaaacaattattgatactgttgac
ccttacccagtggggaagccacctcttcctagaggctaccatacggaatgcactaaacct
cagcttcctgcagatttcacaaagctgcaccttactgacagtctccacccacaggtgacc
cacgtttcatctagtcactcaggatgtagcatcactagtgattcaggaagcagcagcctt
tcagatatctaccaggctacagaaagtgaggctggtgatatggatctcagtggattgcca
gagacagcagtggattctgaggatgatgatgatgaagaagacattgaaagggcatcagat
cctttgatgagcagggatattgttagagactgcttggaaaaagacccaatagacaggaca
gatgatgacattgaacaactactggaattcatgcatcaattgcctgcttttgccaacatg
acaatgtcagtgaggagagaactctgtgctgtaatggtgtttgcagttgtggagagagca
ggaactattgtactaaacgatggggaagagctggattcctggtcagtcattttgaatggc
tctgtggaagtgacataccctgatggaagaacagaaatactgtgcatggggaacagtttt
ggtgtttcccccaccatggaaaaggaatacatgaaaggtgtgatgagaaccaaagtggat
gactgccagtttgtttgtatagcccagcaagattattgccgcatcctcaatcaagtggaa
aagaacatgcagaaggtagaagaggaaggggagattgtgatggtgaaggagcacagggag
cttgaccgcactggaacaagaaaaggtcacattgtcatcaagggaacagctgaaaggtta
acaatgcatttggtggaagagcactctgtggtagacccaacatttatagaagacttcctg
ttgacatataggacctttctttccagcccaatggaagtgggcaagaagttgttggagtgg
tttaatgaccccagcctcagggataaggttacacgggtagtattgttgtgggtgaacaat
cacttcaatgattttgaaggagatcctgctatgactcgatttctggaggaatttgagaac
aatttggagagggagaaaatgggtggacatttaaggctgttaaatattgcttgtgctgct
aaagctaaacgaagattgataaccctaacaaagccatctcgagaagcccctttgcctttt
atcttgctgggagggtcagaaaagggatttggaatctttgttgacagtgtagattttgga
agcaaagctacagaagcaggcttgaaacgtggagaccagatattggaagtcaatggtcaa
aactttgaaaacattcagttgacaaaagccatggaaatccttagaaataacactcacctg
tctatcactgtgaaaaccaatttatttgtttttaaagaactcttaacacggttgtcagaa
gaaaagagaaatggtgctccccacctgcctaaaattggtgatattaaaaaggcgagtcgt
tattccatccctgaccttgctgttgatgtggagcaggtaataggattagaaaaagtaaat
aagaaaagtaaagccaacacagttggaggaagaaataagttaaagaagatacttgacaag
actcgaatcagtattctgcctcagaaaccatacaatgacattggaattggccaatctcag
gatgacagcattgtgggactgaggcaaacaaagcacattcctcctgctttacctgtcagt
ggaaccctgtcatccagtaatcctgacctgctgcagtctcatcaccgcatcttagacttt
aatactactccggacttaccagaccaagttctgcgagttttcaaggcagaccagcaaagt
cgctacataatgatcagcaaggacacaacagcaaaggaagtggtcatccaggccatcagg
gaatttgctctgactgcaacccctgatgcatactcactatgtgaagtctctgtcacacct
gagggtgtcatcaaacaaaggaggcttcctgatcagctgtccaagcttgctgacaggata
cagctgagtggcaggtattacctgaagaacaacatggaaacagaaactctttgttcagat
gaagatgcacaagagttactaagggaaagccaaatttccctactacagctcagcactgtt
gaggtggctacccaactctccatgagaaactttgagctgttccgtaatatcgaacccaca
gaatacatagatgacttgtttaaactcaaatcaaaaacaggttgcactaatctaaaaagg
tttgaagaggtgataaatcaagaaacattctgggtggcttctgagattctaagagaaacc
aaccaactgaagaggatgaagatcattaagcatttcattaagatagcgctacactgcaga
gaatgcaagaacttcaactcgatgtttgccatcattagtggcctgaatttggcaccagtt
gcaaggctccgaactacttgggaaaagcttccaagcaagtatgagaaactgtttcaagat
ctgcaggacttgtttgatccatctaggaatatggcaaaatatcgtaatgtccttaacagc
caaaacctacagccccctattatccccctgtttcctgtcatcaaaaaggaccttacattc
cttcatgaaggaaatgattctaaagttgagggcctggtgaattttgagaagctgcggatg
attgcgaaggagatacgccatgttggtcgcatggcatccgtgaacatggatcctgctctc
atgttcagaacaaggaagaagaaatggaggagtttggggtctctcagccagggcagtgcc
aatgcagccgtgcttgatgttgcacaagcaggggggcataagaagcgggtccgtcgcagc
tcctttcttaatgctaaaaagctctatgaagatgctcagatggcacggaaagtaaagcag
tatctctcaaacttggatctggaaatggacgaagagagcctccagatgctctctctgcag
tgtgagccagccacaaacacattgccgaagaacacaggagacaagcgatctgggaaatct
gaaacatcaccagtggctccccgggcaggcatccagcagaaagtgcagcagcagcataaa
gtaaaccaagcattgcaggtcccagccgtgtctctttatccctctcgcaagaaagtgcca
gtcaaagacctcccaccatttggcattaactccccacaagctttaaagaaaatcctttca
ttatcagaagaaggaagtttggatcgtcacaagaaacagtctgaagacactgtctcaagt
gcatcttcacagctgtcttctcctcctacttcaccacagagttctccaaggaaaggctac
tctttggctccaagcagcactgtggataacttctctgattctggtcacagtgaaatttct
tctagatctagtattgtcagcaattcctcttttgactctatgccagtctccctgcatgat
gagaggagacagaggcattctgtcagcatcgtggagacaaatcttggtgtgggaaggatt
gatagaagaatcatgattgaaccagatcaatacagcttaggctcatatgcaccgctgtca
gagaccagaggcctgtatgctggagcaactgtactttcttctcctagtacagaagagctg
tcacaggaccagggggacagagcttcgctcgacgcagctgacagtggccgtggtagctgg
acttcttgttcgagtggttctcatgataacatccagacaatacagcaccagaggagctgg
gagactctgccttttggacatgctcattttgatagttcaggtgatggggcaggactgtgg
gcctcaggcggccatgtggaccagctgatgttccctgaccatggtacaaaatatggcaaa
caaagtcaaggtagggagggcctcgatcaagcgcagtccagagcaagctgggcatcttcc
acaggatattggggagaggactctgagggtgatacaggtaccataaagcggaggggtggg
aaggatgtttcgattgaagctgaaaccagtagcataacatctgcaccagcagaggagaca
aagccagctcccatccccgctcacacagcagcagcatcaagcagtacaaaggggcttgtt
gcaagaaaagagggtcgatatcgggagccacctccaactcctcctggttatgtaggaata
cctattgctgaatttgcagaaggtggctcccatccaaccaggaagcctccagactacaac
atagcacttcagaggtctagaatggtggcacggacatgtgagactcatgggacagcaact
ccacagcagcagtctcacagccattcaactggcaggcctgtgaacaaacctcagtggcat
aaaccaaatgagtcagatccacgtcttgctcactatccaactcaagggttttccacagag
gaagatgaagatgaacaagtctctgctgtctaa

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