Cinclus cinclus (white-throated dipper): 134044035
Help
Entry
134044035 CDS
T10813
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04010
MAPK signaling pathway
ccic04210
Apoptosis
ccic04218
Cellular senescence
ccic04620
Toll-like receptor signaling pathway
ccic04621
NOD-like receptor signaling pathway
ccic04622
RIG-I-like receptor signaling pathway
ccic04623
Cytosolic DNA-sensing pathway
ccic04625
C-type lectin receptor signaling pathway
ccic04920
Adipocytokine signaling pathway
ccic05132
Salmonella infection
ccic05164
Influenza A
ccic05168
Herpes simplex virus 1 infection
Brite
Transcription factors [BR:
ccic03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
134044035 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134044035
NCBI-ProteinID:
XP_062348966
LinkDB
All DBs
Position
5:complement(51766325..51811825)
Genome browser
AA seq
981 aa
AA seq
DB search
MAAEDSYIMGVSDPQMFAVDQFMGMNALFNSTNYITSDLPLRTDGPYLQIIEQPKQRGFR
FRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKYVHLHAHSLVGK
FCEDGVCTVTAGPKDMVVGFANLGILHVTKKKVFETLETRMIDACKKGYNPGLLVHPELS
YLQAEGCGDRQLTEREREIIRQAAMQQTKEMDLSVVRLMFTAFLPDSNGSFTRKLDPVIS
DAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDESGGMWEG
FGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKDK
EEVQRKRQKLMPNFSDGYGGGSGTGGGGMYGGAGGSAGSEFSFPSYGYSAFGGMHFHPGT
TKSNAGMKHGLSNCTAEEDRRSCDKQSDEWNTKCDVKVETVERTECRTSADNEKKEDSVF
SCKTEVSKADCRWQDALFLEKAMQLARRHCNALFDYAVTGDVKMLLAAQRHLTAVQDDNG
DNVLHLAIIHLHAELVKNLLEVMPDLNYNDIINMRNDLYQTPLHLAVITKQARVVEDLLK
AGADVSLLDRHGNSVLHLAATEGDDKILSLLLRHEKVSPMVNLPNGEGLNAIHMVVMANS
MSCLKHLIASGVNINAQEQKSGRTALHLAVEQENIPLAGCLLLEGDADVDSTTYDGTTPL
HIAAGRGSTKLAAVLKAAGANPHIENFEPLFDLDDVKDGEDDDEGIVPGTTPLDMAANCE
VYDILNGKPYESAEVLEDLLTQGHLRELNENSKMQLYKLLELPDPTKNWSTLAQKLGLGI
LNNAFRLSPSPSKTLLDNYEVSGGTVQELITALRQMDHTEAIEIIQEALSISRRPSALED
STAKALPSSSPLTFANGETGELDNSRFQDTESTCDSGVETSFRKLSFTYSDSLNSKSSLT
LGKMAVGYGQESSGRSNYIAD
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaagattcctatatcatgggagtatctgatccccaaatgtttgcggtggat
cagttcatgggaatgaatgctttatttaacagtactaattacatcacttcagacttacca
ctacgaacagatggaccatatcttcagatcatagaacagccaaaacagaggggatttcgt
ttccgatacgtatgtgaagggccttcgcatggtgggcttcctggtgcttctagtgaaaag
aacaaaaaatcataccctcaggtcaaaatctgcaattatgttggacctgcgaaagtaatt
gtccagttagtaactaatgggaaatacgtccacttacacgctcacagcttggtgggtaaa
ttctgtgaagatggagtgtgcacggttactgcaggacccaaggacatggttgtagggttt
gcaaatcttggaatacttcatgtcacgaagaagaaagtgtttgaaactctggaaacacgc
atgatagatgcttgcaagaagggatacaacccaggactcctggtgcatccagaactcagc
tatctgcaggcagaaggatgcggagacaggcagctaactgaacgggagagagaaatcatc
cgccaggcagccatgcagcagaccaaggaaatggatctcagcgtggtgcggctcatgttc
acagcctttcttcctgacagcaatggcagcttcacacggaaacttgatcccgttatatca
gatgcaatatatgacagcaaagctcccaatgcttccaacctaaaaattgtaagaatggac
agaacagcagggtgtgtgacaggaggggaagagatttacctgctctgtgacaaggttcag
aaagatgatattcaaatacgtttctatgaagaggatgagagtggtggtatgtgggaaggc
tttggagatttttctcctacagatgtacatagacagtttgctattgtgttcaaaacaccc
aagtacagagatgtcaatatcacaaagccagcatctgtatttgtacaactgcgtaggaaa
tctgatctagaaacaagcgaaccaaagccttttctctactatccagaaatcaaagataaa
gaagaagtgcaaaggaaacgacagaagctcatgccaaacttctctgatggctatggtgga
ggcagtggcaccggaggtggtggcatgtatggaggggcaggtggcagtgctggctctgag
ttcagttttccttcatatggctactctgcttttggagggatgcatttccatcctggcaca
acaaagtccaatgctggcatgaaacacggtctatcaaactgcacagctgaagaagacaga
aggagctgtgataaacaaagtgacgaatggaacacgaaatgtgatgtgaaggtggaaact
gtggagaggactgagtgcagaacatctgctgataatgagaaaaaggaggattctgttttt
tcctgtaaaactgaagtaagcaaagcagattgcaggtggcaggatgctctgttcctggag
aaggccatgcagcttgccaggcgccactgcaatgctctctttgattatgccgtaaccgga
gatgtgaagatgctgctggcagctcagcgccatctcaccgctgtccaggatgataatggg
gacaatgtccttcatttagcaattatccacctccatgctgagctggtgaaaaacctcttg
gaagtgatgcccgatttgaattacaatgacatcattaacatgagaaatgacctctatcag
acccccctgcacctggcagtaatcacaaagcaggcaagggtggtggaagacttgctgaag
gctggagcagatgttagccttctggatcgccacggcaattctgtcttacatttagctgct
actgaaggagatgacaagattttgagtctactcctcaggcatgagaaggtatctccgatg
gtcaacctccccaatggtgaaggtctcaatgcaattcatatggtggtgatggcaaatagc
atgtcctgcctcaaacatctgattgcttctggagtcaacatcaatgctcaggaacaaaag
tctggacgaactgcattgcatttggctgttgaacaagagaacatccccttggcaggctgc
cttttgcttgagggtgatgcagatgtggacagcactacatatgatgggacaactccactt
cacatagcagctggaaggggctcaacaaaattggcagcagttctcaaagcagcaggtgca
aatcctcacattgagaacttcgagccattgtttgatctagatgatgtgaaagatggtgaa
gatgatgatgaagggattgtgcctggaacaacaccactggatatggcggccaactgtgag
gtgtatgatatattaaatggcaaaccctatgagtcagcagaggttttggaggacttactc
acacaaggacatttgagagagctgaatgagaattccaagatgcagctttacaaactattg
gaattgcctgatccaaccaaaaactggtccaccctagcacaaaaactgggtcttggaata
cttaataatgccttcaggttgagcccttccccatcgaaaactctgctggataactatgag
gtttctggtggtacagttcaagagctgatcacagctttgagacagatggatcatacagaa
gccatagaaataattcaagaagcactgtccatctcacgcagaccatctgccctggaggac
agtacagcaaaagctcttccatcatcatcaccactcacctttgcaaatggagagacagga
gagctcgataatagcagatttcaagacactgaaagtacatgtgacagtggtgtggagacc
tccttccgcaagctgagtttcacttactcagactctctgaacagcaagtcctcactaaca
cttggcaagatggccgtgggctatggacaggaaagttcagggcgaagcaattacatagct
gactag
DBGET
integrated database retrieval system
