Cinclus cinclus (white-throated dipper): 134044046
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Entry
134044046 CDS
T10813
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccic03036
]
134044046 (SMARCAD1)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
134044046 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
CUE
HHH_3
Motif
Other DBs
NCBI-GeneID:
134044046
NCBI-ProteinID:
XP_062348993
LinkDB
All DBs
Position
5:complement(54528469..54570242)
Genome browser
AA seq
1024 aa
AA seq
DB search
MSLYNLDRFRFERKGKGAEQEAPSPPAACAKAPGAAAAVGAAGGDEEEGADDSNRPDTPA
SDVSERTESSTVPETPEAQRTVQESYFKRQRGVQFLDVSDSEDEEPRNVGAAKEAWAPRR
EVAVISELSNDDDQSEEEMPQLGLVNGGEQQPAVEADVEEDTRDSKLQTMREHFPQRSDQ
ELLKLIESACTMDEAVAAGLKLNYKAASGKRKLRDSPTNCKTKNERVAKKSKVSYLDDSE
PRRQWEREEMLVKKLQTTFPGLDKEELREVLEEHNWVFNDALEALKIFADDEEGVEFPPK
RQVADWTEASSESQSEESKDKTKQKSSEKEQNGFQKKDESKRSIWSAERETEHMEDESAS
EDGGSSLDEDYGSGDEVMEDGYKAKILSFLQDASLSELALIPQCSQKKAQKIIALRPFNS
WEALFMKMTQTSGLSEDIMWNCRILLKERDVVLKLMNKCEDISNKLTKQVTRITRDGGCG
WNIEQPSILNRSLKLKPYQKIGLNWLALLYKHGLNGILADEMGLGKTIQAIAFLAYLYQE
GNRGPHLIVVPASTLDNWIREVNLWCPELNVLFYYGSQEDRKHLRVDIHNKVVDFNVIVT
TYNSAISSSDDRGLFRRLKLNYAIFDEGHMLKNMSSIRYQHLMTINAKNRLLLTGTPVQN
NLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSAEEQSIYEKERIAHAKQIIKPFILRR
VKDEVLKQLPPKKDLIELCSMSEKQEQLYVALLNKLKKTINSNEKNSDMGNAMMQLRKMA
NHPLLHRQYYTNDKLKTMSTLMLKEPTHCDANPDLIFEDMTVMTDFELNVLCKQYSHIND
FTLDMDQILDSGKFRALERILSNLKEKGDRVVLFSQFTMMLDILEVFLKHWQHRYIRLDG
KTQISERIHLIDEFNTDMGIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDR
CHRVGQTREVQVIKLISKGTIEETMLKISQQKLKLEQDMTAAESGEEGTIPADIATLLKA
SLGL
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtacaatttggaccggttccgcttcgagaggaaggggaagggcgcggagcaa
gaggccccgtccccgccggcggcctgcgcgaaggcacctggcgctgctgccgcggtcggt
gccgctggaggggatgaggaggaaggtgcggatgacagtaacaggccggacactccggct
tccgacgtctctgagagaactgagtcttccactgtcccagaaactcctgaagctcagagg
acagtgcaagagtcttatttcaagcgccagcgaggggttcagttccttgatgtgtctgac
agcgaggatgaggagccaagaaacgtcggtgctgccaaagaagcctgggctccgaggaga
gaggtggccgtaatatctgaactgtctaatgatgatgaccagtctgaagaggaaatgccc
cagctggggcttgtaaatggtggggagcagcaaccagctgtggaggcggatgtagaggaa
gataccagagactcaaaattgcaaacaatgagggaacattttccccaaagaagtgaccaa
gaattattaaaactgatagaatcagcatgcacaatggatgaagcagtagctgctggtttg
aagctcaattacaaagctgcctctggtaaaaggaaactaagagattctcccacaaactgc
aaaaccaaaaatgagcgagttgcaaaaaagtcaaaagttagttatctggatgactcagaa
cccagaagacaatgggagagggaagagatgcttgtgaaaaagttgcaaactacattccct
ggattggataaggaggagctgagagaggtacttgaggaacataactgggtgtttaatgat
gcactggaggccctgaaaatatttgcagacgacgaggagggtgtggaatttcctccaaaa
aggcaagttgctgactggactgaagcctcctctgagagccaaagtgaggagagtaaagat
aagacaaagcagaaatcttctgaaaaagagcagaatggctttcagaaaaaggacgaaagc
aaaaggagcatttggagtgctgaaagagaaacagagcacatggaggacgagtccgcttcc
gaagatggcggaagctccctggatgaagactacggcagcggcgacgaagtgatggaggat
ggctacaaagccaaaatcctcagcttcctgcaggatgcttccctgagcgaactggctctg
attccccagtgttctcagaaaaaggctcagaagataatagcgctccggccctttaacagc
tgggaggctctgtttatgaaaatgacacagacttctggtttgtcagaagatataatgtgg
aattgcaggatactgctgaaggagagggatgtggttctaaagctcatgaataaatgtgaa
gacatttccaataaactgacaaaacaggtaaccaggattactagagacggaggatgtgga
tggaacatagagcagccctccattttaaatcgcagtttgaaactgaagccatatcagaag
attggtttgaactggttagcactgctgtataagcacgggttgaatggcatcttggctgat
gaaatgggcttaggaaaaacaattcaagctattgcatttctggcttatctctaccaagag
ggcaatagaggtccccatttgatagttgtcccagcttcaacattagataactggataaga
gaagttaatctgtggtgtcctgaactgaacgtcctcttttactatggatcccaggaagat
aggaaacatctcagggtggacatccataataaagtcgttgatttcaatgtgattgtgact
acatacaactctgcaatcagcagctcagacgatcgaggactgttccgcaggctgaagctt
aactatgcaatttttgatgaaggtcacatgctcaagaacatgagctctatccgctatcag
cacctcatgacaattaatgccaagaatcgcttgctgctaacagggactccggttcaaaat
aatctgttggaattgatgtccctcttgaattttgtcatgccccatatgttcagcagtagc
acaagtgaaattcgaaggatgttctcttcaaaaacaaagagtgctgaagaacaaagcata
tatgagaaggagagaattgcacatgccaagcagataataaaaccattcatcttgagaaga
gtaaaagatgaggtccttaagcaactacctcccaaaaaagatctcattgaactgtgttcc
atgtccgagaaacaggaacaactctatgtggctctcttaaacaagctcaagaaaactatt
aacagtaatgagaaaaactccgatatgggaaatgcaatgatgcaacttagaaaaatggcc
aatcaccctcttctgcatcgtcagtactacacgaatgacaagctcaagacaatgtccacc
ctcatgctcaaagaacccacacattgtgatgccaaccctgaccttatctttgaagatatg
acagtaatgacagattttgagctgaatgtgctttgtaagcaatattctcacatcaatgac
ttcacattagacatggatcagatcctggattctggaaagtttagagcactggaacgcatt
ctctccaaccttaaagagaagggtgacagagttgtgttgtttagccagttcactatgatg
ctggacatcttggaagttttcctaaaacattggcaacatagatacattaggctggatgga
aaaacgcagatttctgagaggatacatctgatagatgagttcaatacagatatgggtata
tttgtattccttctgtccaccaaagctggtggcttgggcattaatctgacatcggccaat
gttgttatccttcatgacattgactgcaacccttacaatgataagcaggcagaagaccgg
tgccacagagtaggtcagacacgagaagtacaagtcataaagctcatcagtaaggggact
attgaagaaaccatgctcaaaatcagccaacagaaattgaagttagaacaagatatgact
gcagcagaatcaggggaagaaggaaccattccagcagatatagccacgctattaaaagct
tcattgggtctctaa
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