KEGG   Cinclus cinclus (white-throated dipper): 134044072
Entry
134044072         CDS       T10813                                 
Symbol
HELQ
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
ccic  Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:ccic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccic03400]
    134044072 (HELQ)
Enzymes [BR:ccic01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     134044072 (HELQ)
DNA repair and recombination proteins [BR:ccic03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    134044072 (HELQ)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF7898 DUF4332 DNA_pol_lambd_f RIMB1_N DGKD_4H Sll0103_C Cdd1 DUF3135
Other DBs
NCBI-GeneID: 134044072
NCBI-ProteinID: XP_062349063
LinkDB
Position
5
AA seq 1055 aa
MAEPRLAVRRRNRSSSERKRSRAPVQPIAASSPVARKRPSPGGEGPPAETPGSNDSDEDM
FGDYDSFYENDSLIAQVDDIEHKYLQDKNMDVKAAGEVVLGNLQSGVHQKEQDNFSASTN
VVDLKSDKEGACQMCDSDSAAGNQELTESILDDLPSSQLLYFEKRDELSSATRTSPVLKG
RDEPVNSSLDKVRDPLSFCAGAEHRNRPTDSSSHSKCVLFKTESLKDHLKSAMTGNARAQ
TLQVSKTKQLKEAVLSEEMFVARKAIESSSVDIGPFYGLPSKVKDLFRQLRGIETLYEWQ
HDCLMLESLQQRKNLIYSLPTGGGKTLVAEVIILQELLCRQKDVLMILPYVAIVQEKVWI
QGLSSFGIELGFLVEEYAGSKGRFPPIKRRVKKSLYIATIEKGHALVNSLIETDRIDDLG
LVVVDELHMLGEGSRGAILEITLAKILYTSKKTQIIGMSATLNNVGDLQKFLQADYYTNN
FRPVELKEYIKIRDTIYAVDSNTENGFVFSRLLNFKYSSNLEKADPDHIIALVTEVIPKY
SCLIFCPTKKSCENVASLVCKYLKKEFRAHREKEKQDLIKNLKSIGNGTVCPVLKQTIPF
GIAYHHSGLTNDERKSIEETYSSGVLCLLACTATLAAGVNLPARRVILRSPYVGNDFLKK
NQYKQMIGRAGRAGIDSAGESILIVQEKDKHLVQDLVHSPLENCYSNLLLELTKGMQSLL
LSLVGLKIAVTHEEVDNFMCCTLLGVQQQLLSKEKSLSEIIKDGLENLIEKGLLKGRISE
KEHNSKSALTITPLGKATYKGSIDLAYCNLLYRELKKGLEGLVLESSFHLLYLSTPYDMT
FTCSPDWMIYFRQFNQLSTAERKVADIVGVPESFITKKASGQAIRKNVDNAVVNRLYLTF
VLYSLLKETNIWSVSEKFNMSRGYVQNLLSSAASFASCLLHFCEELEEFWVYKALLTELT
KQLTYCVKTELIPLMEVAGVLEARAKQLYNAGYKTLAHLANANPETLVRMIEHLSRRQAK
QIVSSAKMLLNEKAEALQEEVEELLKVPTDIPGTH
NT seq 3168 nt   +upstreamnt  +downstreamnt
atggcggagcccaggctcgccgtgcggaggaggaaccgctccagctcggagcgcaagcgg
agccgggctccggtgcagcccatcgccgccagctcgccggtagctcgcaagagaccgagt
cctggtggcgagggacccccggccgagaccccgggcagtaacgatagcgatgaggatatg
tttggggactatgacagcttttatgaaaatgattcattgatagctcaagtggatgatatt
gaacacaaatacctgcaggacaaaaatatggatgtgaaagcagctggagaggtcgtactt
gggaacctccagtcgggagttcaccagaaagagcaagataacttttctgcttcgacaaat
gtggttgaccttaaaagtgacaaagagggtgcttgccagatgtgtgacagtgactcagct
gctggcaatcaagaattaactgagtctattttagatgacttaccatcatcacaacttctg
tattttgaaaaaagggatgaactttcttctgctactagaacatctccagtcttaaaaggg
agggatgaacctgtgaattcttccttggacaaagtcagggacccattgtctttttgtgct
ggtgctgagcacaggaacagaccgactgactcttcatcacattccaagtgtgttttattt
aaaactgagagtctcaaagatcacctgaaaagtgctatgactggaaatgccagagcccag
actctgcaggtctccaagaccaagcagctcaaagaagctgttttatctgaagaaatgttt
gtggctagaaaagctattgaatcctcttctgttgatataggccctttttatggattacct
agcaaggttaaagatttattcagacaacttcgagggattgaaacactctatgagtggcag
catgattgtttaatgttagaatccctacagcagaggaagaacttgatatactcattgcca
actggtggtggaaaaactcttgtagctgaagtcataattctccaagaattactgtgcagg
cagaaggatgttctgatgatcctgccatatgttgctattgtccaagaaaaggtctggata
cagggtttatcgagttttgggatagagttgggtttcctggttgaagaatacgcaggaagt
aaaggaagatttccaccaatcaaaaggagagtaaaaaaatctctttatattgcaactata
gaaaaaggacacgctctggtgaactccttaatcgaaacagacagaattgatgacctcggc
ctggttgtggtagatgagctgcatatgctcggggagggaagtcgtggagcaatactggaa
attactctggcgaaaattctttacaccagtaaaaagacacagatcattggcatgagtgca
acattaaataatgttggagacctgcagaagttcctgcaagcagactactacactaacaat
tttagaccggtagaattaaaggaatacataaagatacgagacaccatttatgcagttgac
agcaatacagagaatggctttgttttttcacgtctccttaatttcaagtattctagtaat
ctggagaaagcagatcctgaccacatcattgcactggttactgaagttattcctaaatat
tcctgcctaatcttttgtcccactaaaaagagttgtgaaaatgtggcttcattggtgtgc
aagtaccttaagaaagaatttagagctcacagggagaaagaaaagcaagatctcatcaag
aacctaaagagtattggaaatgggactgtctgtcctgttttgaagcaaacaattcctttt
ggtattgcctatcaccacagtggccttacaaatgatgaaagaaaaagcatagaggaaact
tattcttcaggtgtcctgtgtctgcttgcttgcacagccactctagctgctggagtcaac
ctgccagctagaagggtgattctcagatctccttatgttggcaatgacttcctgaagaag
aaccagtataaacaaatgattggcagagctggtcgagctggtattgacagtgctggagaa
agtattctcatagtgcaagaaaaagacaaacacttggttcaggatttagttcacagtcct
ttggagaattgctacagcaatcttctgctggagttgaccaagggaatgcagagcctgttg
ttatctttagttggactgaagatagcagttacccatgaggaagtggacaattttatgtgc
tgtaccttgctgggtgttcaacagcagctgctgtctaaagagaagagcctctcagagata
attaaagatgggctggaaaatctaatagaaaaaggactcctaaaaggaagaatatctgag
aaggagcacaattccaaatctgcactgacaatcacacccttgggtaaagctacatataaa
ggctcaatagacttggcatactgcaatcttctgtacagagaactgaagaagggtttggag
gggctggttcttgagagcagttttcatctcctgtatctgtcaactccctatgatatgact
tttacctgtagcccagattggatgatatactttagacagttcaaccagctaagcacagca
gagcgaaaagtagcagatattgtgggagtacctgaaagctttattacaaaaaaggcttct
ggtcaagccatcagaaagaatgtggacaatgccgtggttaacaggctctacctgacattt
gtcctttattccctactgaaagagaccaatatatggagtgtttcagagaaatttaacatg
tcccggggatatgtgcaaaatctcctcagttctgctgcctcctttgcatcctgccttctg
catttctgtgaggaattggaagaattctgggtttataaagccttgcttacagaacttacc
aagcagctgacatactgcgttaagacagagctcatccctctgatggaggtagcaggagtt
ctagaggcacgagccaaacagctttacaatgcagggtacaaaactttagcacacttggct
aatgcaaatccagaaactttggtgaggatgattgagcacctgtcacgacgtcaagccaaa
caaatcgtttcatctgcaaagatgctgctgaatgaaaaagctgaggctttacaggaagaa
gttgaagaactcttaaaagtgccaacagatatcccagggacccactga

DBGET integrated database retrieval system