Cinclus cinclus (white-throated dipper): 134044157
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Entry
134044157 CDS
T10813
Symbol
VAX2
Name
(RefSeq) ventral anterior homeobox 2
KO
K09318
homeobox protein ventral anterior
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccic03000
]
134044157 (VAX2)
Transcription factors [BR:
ccic03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
134044157 (VAX2)
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
YdaS_toxin
Motif
Other DBs
NCBI-GeneID:
134044157
NCBI-ProteinID:
XP_062349236
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Position
5:1739037..1759512
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AA seq
329 aa
AA seq
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MFDPAAAPAGMSDGGAEPGGSPVLLAEPAATGRAREKLPTRAELESALRTGGGGNGGAGG
GFKDIPGTSAVSPGSSKQCAPDTESPSGTGEADYCRRILVRDAKGTIREIVLPKGLDLDR
PKRTRTSFTAEQLYRLELEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQ
SRDSEKRSSSTSESFATCNILRLLEQGRLLSVPAPPSLLSPTSNPVPSPAGSAAGLAAPG
PASPGLGGGSSPPKPAPFGLHVPSLASSSSSSPSSSSPRLSGRPLCFGGPLLGSLHDLPG
VYGPGASAFEPYTRLERKDNSIPSKKPSP
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatcccgccgcggcgcccgcagggatgagcgatggaggggccgagcccggcggg
agccccgtgctgctggccgagcccgcggccaccgggcgggcccgggagaagctgccgacc
cgggcggagctggagagcgccctgcgcaccggcggcggcggcaacggaggagccggcggc
ggcttcaaggacatcccgggaacgtcggcggtcagccccggctcctccaagcagtgcgcc
ccggacaccgagagcccgtcggggaccggcgaggcggattactgccgccgcatcctggtg
cgagatgccaaagggacgatccgggagatcgttctgcccaaggggctggacctggacagg
cccaagaggacgcggacgtccttcacggcggagcagctctaccgcctggagctggaattc
cagcgctgccagtacgtggtgggccgggaaaggacggagttagcacggcagctcaacctc
tccgagacacaggtcaaggtgtggttccagaaccgccgcacgaagcagaagaaagaccag
agcagggactctgagaaacgctcctccagcacctccgagtccttcgccacctgcaacatc
ctgcggctgctggagcaaggccgcctcctgtccgtgccggcccccccgagcctcctgtcc
cccacctccaaccccgtccccagccccgcggggagcgctgctggcctggccgctcctggt
cccgcgtccccggggctgggtggtggcagcagccccccaaaaccggcgcctttcggcctg
cacgtcccgtctctcgcctcttcctcctcatcttcaccgtcctcatcgtcgccgcggctg
tcggggaggccgctgtgttttggggggccgcttctgggcagcctgcacgacctgcccggt
gtttacggaccgggcgcgtccgcgttcgagccttacacgcggctggagaggaaggacaat
tctatacccagcaagaagccgagcccttaa
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