KEGG   Cinclus cinclus (white-throated dipper): 134044250
Entry
134044250         CDS       T10813                                 
Symbol
MSX1
Name
(RefSeq) homeobox protein MSX-1
  KO
K09341  homeobox protein MSX
Organism
ccic  Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:ccic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccic03000]
    134044250 (MSX1)
Transcription factors [BR:ccic03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain ANTP: NKL
    134044250 (MSX1)
SSDB
Motif
Pfam: Homeodomain Homeobox_KN HTH_NDX
Other DBs
NCBI-GeneID: 134044250
NCBI-ProteinID: XP_062349359
LinkDB
Position
5:complement(12626757..12629594)
AA seq 294 aa
MAPAVDMTAAPTGVRSDELPASAFSSPGGGALPVAAAMGGEEESDKPKVSPSLLPFSVEA
LMADHRKPGGRDGPEGAGPPPGAGPAARSSLSPRLGALSAEAPPSPLPLGGHFSVGGLVK
LPEDTLVKAESPEKQERSPWMQTPRFSPPPPRRLSPPACTLRKHKTNRKPRTPFTTAQLL
ALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPM
LPPAAFGISFPLGGPAVAGASLYGASSPFQRAGLPVAPVGLYTAHVGYSMYHLT
NT seq 885 nt   +upstreamnt  +downstreamnt
atggccccggctgtggatatgaccgccgcgcccaccggggtccgcagcgacgagctgccc
gcatccgccttcagcagtcccggcggcggcgccctccccgtcgcggcggcgatgggcggg
gaggaggaaagcgacaagcccaaggtctccccatccctcctgccgttcagcgtggaggcg
ctcatggccgaccacaggaagccgggaggcagggacggacccgagggcgccgggcccccg
ccgggcgctgggccggccgcccgctccagcctcagccctcggctgggcgcgctgtcggcc
gaggcgcctccttccccgctgcccctcggcgggcacttctccgtcgggggactggtcaag
ctgcccgaagacacgctcgtcaaggcggaaagccccgagaagcaggagcggagtccctgg
atgcaaaccccgcggttctcgccgcctcccccgaggcggctgagcccccctgcctgcacc
ctgcgcaagcacaagacaaacaggaagccccggacgcccttcaccacagcacagctgctg
gccctcgagaggaagtttcggcagaagcagtacctgtccattgccgagcgggcagagttt
tccagctcgctcagcctcaccgagacccaggtgaagatctggttccagaaccgtcgcgcc
aaggccaagaggctccaggaggccgagctggagaagctgaagatggcagccaagcctatg
ctcccgcctgctgcttttggcatctccttcccactgggtggtccggctgtggctggtgct
tccctgtacggtgcctccagcccttttcagcgggcagggctgcccgtggctcctgtggga
ctgtacacagcacatgtgggatacagcatgtaccacctcacatag

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