Cinclus cinclus (white-throated dipper): 134044296
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Entry
134044296 CDS
T10813
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
134044296 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccic01007
]
134044296 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccic03016
]
134044296 (GARS1)
03029 Mitochondrial biogenesis [BR:
ccic03029
]
134044296 (GARS1)
Enzymes [BR:
ccic01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
134044296 (GARS1)
Amino acid related enzymes [BR:
ccic01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
134044296 (GARS1)
Transfer RNA biogenesis [BR:
ccic03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
134044296 (GARS1)
Mitochondrial biogenesis [BR:
ccic03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
134044296 (GARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
OS-D
EcoRII-C
Motif
Other DBs
NCBI-GeneID:
134044296
NCBI-ProteinID:
XP_062349436
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All DBs
Position
1:complement(3774285..3797809)
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AA seq
711 aa
AA seq
DB search
MPLPRSVLPALLRRLARPLRSAAPPAMDGPQAEALLAPLRNAVRQQGELVRKLKEEKAPQ
VDIDRAVAELKARKRVLEAKELALQPKDDVVDRAKMEDTLKRRFFYDQAFSIYGGVSGLY
DFGPVGCALKNNIIQAWRHHFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKN
GECFRADHLLKAHLQKLMSDKKCTAEKKAEMENVLTQLDNYGQQELADLFVNYNVKSPVT
GNDLSPPVSFNLMFKTSIGPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGN
SFRNEISPRSGLIRVREFTMAEIEHFVDPSEKNHPKFQNVADLNILLYSAKAQVSGQSAH
VMRLGDAVQQGVINNSVLGYFIGRIYLFLTKVGVSPEKLRFRQHMENEMAHYACDCWDAE
SKTSYGWIEIVGCADRSCYDLSCHARATKVPLIAEKHLKEPRTVNIVQFEANKGAIGKAY
KKDAKVVMEYLSMCDECYISEMEQLLNEKGEFTVETEGKTFLLTKDMVTVKRFQKTLHVE
EIIPNVIEPSFGIGRIMYTVFEHTFRIREGDEQRTYFSFPAVVAPFKCSVLPLSQNQEFM
PFVKELSEALTRTGISHKVDDAAGSIGRRYARTDEIGVAFGITIDFDTVNRSPHTATLRD
RDSMRQIRAEISELPAIIRDLANGYLTWADVEAKYPQFEGQETGKKDTIEE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttccccgtagcgtcctgcccgccctgctgcgccgcctcgcccgcccgctccgc
tccgccgccccccccgccatggacggcccgcaggccgaggcgctgctggcgccgctccgg
aacgcggtgcggcagcagggagagctggtgaggaagctgaaggaagagaaagctccccag
gtggacatagacagagctgtagcagagctcaaagctcggaagagagtcctagaagcaaag
gagttggcgttacagcccaaagatgacgttgtggacagagctaagatggaagacactctc
aaaaggaggtttttctatgaccaagccttttctatttatggaggagtcagtggtctttat
gactttgggcctgttgggtgtgctttgaagaacaacatcatccaggcatggagacatcac
ttcattcaggaagagcaaatcctggagattgactgcaccatgcttacgcccgagccggtt
ctaaaaacttctggccatgtagacaagtttgctgacttcatggtgaaagatgtgaaaaat
ggggaatgtttccgtgctgatcatctcttaaaagctcacctgcagaaactgatgtctgac
aagaagtgcacggcagagaaaaaggcagaaatggaaaatgttctaacacagttggacaat
tatggccagcaagaacttgcagatctctttgtgaactacaatgtgaaatcccctgtcact
gggaatgacctgtcccctcctgtttctttcaatctgatgttcaagacctccattgggcct
ggaggaaacatgcctggctatctgaggccagaaactgcacagggaatattcctcaacttc
aaacgtctactggagtttaaccaaggcaaattgccttttgctgctgcccagattggaaat
tccttcaggaatgaaatctcaccccgctccggccttatcagagtgagggaattcaccatg
gcagaaattgagcactttgtggaccccagtgagaaaaaccatcccaagtttcagaacgtg
gcagatctcaacatcctcctgtactcagccaaggcccaggtcagcgggcagtctgcgcac
gtcatgcggctgggagacgctgtccagcagggtgtgatcaataactcggttctcggttac
ttcatcggcagaatctacctcttcctcacaaaggtcggtgtatccccggagaagctgcgc
ttccgacagcacatggagaatgagatggctcattatgcctgtgactgctgggatgcagag
tccaaaacctcctatggttggattgagatcgttggctgtgctgatcgttcctgctatgac
ctttcttgccatgcccgtgccaccaaagttcctctcatagctgagaagcatctcaaagaa
cctagaacagtcaacattgttcagtttgaggcaaataagggagccattggcaaagcttac
aagaaggatgccaaggtggtgatggaatacctttccatgtgtgatgagtgctacatcagt
gagatggagcagctgctcaacgagaaaggggaattcactgttgaaactgaagggaaaact
tttctattaacaaaggacatggttactgtgaagagatttcagaaaacattacatgtggaa
gaaatcatcccaaatgtcattgagccctcgtttggcattggaaggatcatgtacacagtg
tttgagcacacattccgcatccgggaaggagatgagcagagaacatacttcagcttccca
gctgttgtagcaccgttcaaatgctccgttcttcctctgagccagaatcaggaattcatg
ccttttgtcaaggaattatccgaggcgctgaccaggaccgggatctcgcacaaggtggac
gacgcggcggggtccatcggccggcgctacgcccgcacggacgagatcggcgtggccttc
ggcatcaccatcgacttcgacacggtgaaccgcagcccgcacacggccacgctgcgcgac
cgcgactccatgcgccagatccgcgccgagatctctgaacttcctgccatcatccgagac
ctggccaacggttatctcacctgggctgatgttgaggcaaaatatccacaatttgaggga
caagagactggcaaaaaggacacaatagaggaataa
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