Cinclus cinclus (white-throated dipper): 134044322
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Entry
134044322 CDS
T10813
Symbol
GABRB1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04080
Neuroactive ligand-receptor interaction
ccic04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134044322 (GABRB1)
04082 Neuroactive ligand signaling
134044322 (GABRB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccic04040
]
134044322 (GABRB1)
Ion channels [BR:
ccic04040
]
Ligand-gated channels
GABA-A
134044322 (GABRB1)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
134044322
NCBI-ProteinID:
XP_062349479
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Position
5:25216900..25336258
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AA seq
478 aa
AA seq
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MGAAARRAGRRALLLPLALAVACAARSADGPSNMSYVKETVDRLLQGYDIRLRPDFGGPP
VDVGMRIEIASIDVVSEVNMDYTLTMYFQQSWRDKRVSYSGIPLNLTLDNRVADQLWVPD
TYFQNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIEFYWNGGESAVTGVNNIELPQFSIVDYKMVSKRVEFTTGAYPRLSLSFRLK
RNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKI
PYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQRQKKTAGRAGHATGEKGRLETNR
VQVDDDYGNMILRALEIRSDACSSDMFTSLCDPGATMYTCNSANLEYRRAPSSRDLYNRS
ALDRHRLHKKGHLRRRASQIKVKIPDLTDVNLIDKWSRMVFPIMFILFNVVYWLYYVH
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggctgcgaggcgggccggccggcgggcgctgctcctgccgctggcgctggcc
gtggcgtgtgcggcgcgcagcgccgacgggcccagcaacatgtcctacgtgaaggagact
gtggacaggctgctccaaggctacgacatccgcctccgccccgacttcggaggtccgccc
gtggatgtgggcatgcggatagagatcgccagcatcgacgtggtctcggaggtcaacatg
gactacaccctgaccatgtactttcagcagtcctggagggataaaagggtctcttattct
ggaatacctttgaacttaactctggacaacagagtggctgaccagctctgggtgccggac
acgtatttccaaaatgacaagaaatcatttgtccatggggtgacagtgaaaaaccgaatg
attcgactccatccagatgggacggtcctttatggcctacggatcacaacaacagctgct
tgcatgatggatctacgcagatatcctctggacgaacaaaactgcacactagaaattgaa
agttatggatacactactgatgatattgaattttactggaatggaggagagtcagcagta
acaggagttaataacatcgagctcccacaattttctattgtggattacaagatggtatca
aagagagtggaatttacaacaggggcatatcctcgattatcacttagcttccggcttaaa
agaaatattggatacttcattttgcaaacctatatgccttccacgctgatcacaattctc
tcatgggtgtctttttggatcaattacgatgcctctgcagccagagttgctctaggaatc
acaactgtgctgaccatgaccaccatcagcacccacctcagggagaccttgccgaagatt
ccctatgtcaaggcaatagatatttacctgatgggatgctttgtgtttgtgttcctggcc
ttgctggaatatgcctttgtaaactacatattctttgggaaaggacctcagcgtcaaaaa
aagacagcaggcagggcaggacatgctacaggcgagaagggcagactggaaacaaataga
gtccaggttgatgatgactatggaaacatgattctcagagcacttgaaatacgaagtgat
gcatgcagctcagatatgttcacgagcctctgtgaccccggagccaccatgtacacgtgc
aacagtgccaacctggagtacagaagagccccttccagcagagacctctacaacaggagt
gctctggacaggcacaggctccataaaaaaggacacttacgcaggagggcatcccagatc
aaagtcaaaatccctgatttgactgatgttaacctgatagacaagtggtccagaatggtc
tttccaatcatgtttattcttttcaatgttgtttactggctgtattatgtccactaa
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