Cinclus cinclus (white-throated dipper): 134044355
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Entry
134044355 CDS
T10813
Name
(RefSeq) general transcription factor IIE subunit 1-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134044355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccic03021
]
134044355
Transcription machinery [BR:
ccic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
134044355
Prokaryotic type
Archaeal type
TFE
134044355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Cas12f1-like_TNB
Zn_ribbon_PaaD
GntR
DUF7501
ANGEL2_N
PyrI_C
Motif
Other DBs
NCBI-GeneID:
134044355
NCBI-ProteinID:
XP_062349527
LinkDB
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Position
5:complement(29801107..29804516)
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AA seq
418 aa
AA seq
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MEQNAPSEVPAALKRLAKYIVRGFYGVECSLALDVLIRYPCVKEDDLLQLLKYERKQLRA
ALNMLKADKLVKLRMRVETGPNGKSMRHNYYYINYKVLVDVIKYKLDQVRRKIEADERDS
TTRSSFKCPSCSSTYTDLEVNQLFDAFTETFRCTYCNTEVEEDGSAFPKHDARTLLAKFN
EQIEPVFMLLRETEDIVLPYDLLEPQPTEVPELSESSDLTSGSSVLESCSPPEKWAHSSA
FGLTYAQNLTIDIQNSKQEKKKATEKQPIWLSQRTMEGAATATNNSIGVNTSEETEKNVK
ETVTDNEIIKTLLIHESKSSSSTDQAPIVKRKLHGSQSDNSEFEESAKHSRGAEMQVAGS
NFEQEEEQETLGPILMVAGQPCSYGEVSENPELVSLMTNEERDAYIKVGQEMFQSVFE
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacgctcccagtgaggtgccagcagccctaaagcgcctggccaaatacata
gtgcgtggtttctatggtgtggagtgttccctggccctggatgtgctgatccgctacccc
tgtgtgaaagaggatgacttgttacagctgctcaagtacgagcgtaagcagctgcgcgct
gccctcaacatgctgaaggcggacaagctggtgaagctgcggatgcgagtcgaaacgggg
cctaatgggaagagcatgaggcacaattactattacatcaattacaaggtgctggtggat
gtgataaaatacaaactggatcaggtacgccggaaaatagaagcggatgagcgagattca
actaccagatcctcttttaaatgtccatcttgctctagcacgtacacggaccttgaagtc
aatcagctctttgatgcatttacagagaccttccgctgcacttactgcaacactgaagta
gaggaagatggctcagcatttccaaagcacgacgctcgaaccttgctggcaaagttcaat
gagcagattgagcctgtctttatgctgctgcgtgagactgaggatattgtgctgccctat
gacttgctggagcctcagccaacagaagtaccagaattatcagaaagctctgatctgaca
tcaggctcaagtgtgctggaatcctgcagcccccctgagaaatgggcacacagttctgct
tttggccttacatatgcccaaaacttaactattgatatccaaaactcaaagcaagagaag
aaaaaagcaactgaaaagcaacctatctggttgtcacagaggactatggaaggagcagca
acagctaccaataatagtattggagtaaacacttctgaagaaactgaaaaaaatgttaaa
gaaactgtcactgataatgaaataatcaagactcttctgatccatgaatccaagtcatca
tctagcacagaccaggctcctattgtcaaaaggaaactccatggatcacagagtgataac
agtgagtttgaagagagtgccaagcactcaagaggagcagaaatgcaagtagctggcagc
aactttgaacaagaggaggaacaggaaactctgggtcctattttaatggtggctggccag
ccctgttcatatggtgaagttagtgaaaacccagagcttgtgtctctcatgacaaatgaa
gagagagacgcttatataaaagtaggacaagaaatgttccagtctgtctttgagtaa
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