| Entry |
|
|---|
| Symbol |
LIMCH1
|
|---|
| Name |
(RefSeq) LOW QUALITY PROTEIN: LIM and calponin homology domains-containing protein 1
|
|---|
| KO |
| K24422 | LIM and calponin homology domains-containing protein 1 |
|
|---|
| Organism |
ccic Cinclus cinclus (white-throated dipper)
|
|---|
| Brite |
Domain-containing proteins not elsewhere classified [BR:ccic04990]
LIM domain-containing proteins
Other lim domain-containing proteins
134044410 (LIMCH1)
|
|---|
| SSDB |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
5:23464670..23531102
|
|---|
| AA seq |
1612 aa
MRKETEDIESPKRSIRDSGYIDCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSQQTPSPD
VVLRGSSDGRGSDSETDLPHRKMPDVKKDDMLARRTSHGEPKSAVPFNQYLPNKSNQTFY
VPAPLRKKKAEREEYRKSWSTATSPLGDRPFSKPHPETIEEELNETTGLCEKEKVGSIAP
EASSLKNQLGVNQSEENSTDQSPSCSAKETSAPKGKDVEEMKKLRRLEQAGIKVMSAAQR
YGSKKPICEDSGSIPDIILRKDNPFMTHYQGKDSGSEDEAASRVPDLEKDDFATRRARMN
QPKHIIPFNSFVVGPYTSKEKGKLEDIKKPLQMEKKEHARRRRVHMTSVRQIGTSKENPL
LQKEKTESREEQQVKELDNERDDLSKQKSQSILPQLQEDVPFVNASITKADLETWKRLKL
SGEPSEEDFRCSSNTLPPTDATVKAVAHDDFAVRKTRANKKAGSPKQKFVHFGPVTEIDQ
QKWDKLVIGRASSKSGTEEESKKDGVESLSGVKSSPSTTAVSLGFAEQHSSEVSEPENES
SKGGVKSGRDYSCRRIPSPLPASDVICEKQTPWSLSKQQESTEEECDRNLPDIERDDMLV
RRMGTFSRRATSSIPINCPPLSLAHLLQQQQQEEVVAREKDLKTLQEGESTIRQEESQEQ
LEIPQLQSDGTENMKFPDPQRDDMLARRTGAFLKQHGPNVKQFLPMPFSKQQNKQGTATE
LEKKTTRPEKCPQVYSNSYGKPAVESPQGQEDSLPRTGQDEIIRGAQVAEGDHSEVHLSQ
TSKLQEVPEENKMETLSSKDEHLQTFGPRTAVSDDAESMSMFDMRCEEEAVAQPHSKARH
EKLQNIHNQLKEDETRWQDDLARWKSRRRSASQDLIKKEAERKKMERLLAGDGMSERRKS
IKTYREIVEEKERRERELHEAYKNAKTQEEAESILQQYTERFTISEAVLERLQMPKILER
SHSVEPNSPLKDPNPLRYLRQQSLPAPKFTATIEATIVPTTELEPSSSTGRTSPSKSVSK
AVPMLTPKPYSQPKNTQEVLKNFKVDGKVSMNGENVNGMEEKDKECTTVIFTPSPTRSLK
SDGVARGDKPLVELKKDPPSVELSLQRPATQSVHKEPTASPVELDGADSLQAKRSPGSEA
PAPLECPSPEFGLDQKQFKSTAACASPVVKRLEFLPSPVPSEETTSSKKDVKKAEAEQQK
DTALPPTQEVIKTKYLEEKGSVVLPFLKKLPETSQVTLHNSGLQEPPRGAMVPLRVRNNW
RRSQFFSQSADSDTGDKSNRFNFWAWDPEEERKRQERWQHEQERLLQEKYQKEQCKLKEE
WEKAQREVEEEERRYYEEERKIIEDTVVPFIVSSNSAELLSSSSSTTEGNKIVNSTDSNS
CPGEGKQKEVAKQKMLLWEQDSMSSLKSKESELWQEKRSSGNKMFSGYPETGILKGGSEQ
EHHMPATELSSPARLNLPLTQDENVSWSQQLLTKRSPQCMEDFLQKPFPGQTVGQQPSST
GESRRVGYHETFRSGPSSPCSPAALSQSPNRYXRSVSGKKLCSTCGLPLGKGAAMIIETL
GLYFHIQCFRCGVCKGQLGDAASGTDVRIRNGLLNCNDCYIRSRTAGQPTTL |
|---|
| NT seq |
4839 nt +upstreamnt +downstreamnt
atgagaaaggaaacagaggatattgaaagccccaagcgcagcattcgtgacagtggctac
atagactgctgggactctgagcgcagtgattccctctccccacctcgccacggcagagat
gattcctttgacagtctggactcctttggctcccgctcgcagcagacaccatctccagat
gtagtgctcagagggagtagtgatgggagaggaagtgactcggaaactgacctgccacac
agaaagatgccagatgtgaaaaaagatgatatgttggcgaggcggacctcacacggtgaa
cctaaatcagctgtgccttttaaccagtacctcccaaacaagagtaatcagactttctat
gtacctgctccacttcgaaaaaagaaagctgaacgagaggagtacagaaagagctggagc
acagcgacttcgccactaggagacagacctttcagcaaaccccaccctgaaaccatagaa
gaagaactgaatgaaacaacaggactgtgtgaaaaggagaaagtgggttccatagctcct
gaagcaagctcccttaaaaatcaattaggtgtgaatcaaagtgaagaaaactccacagac
cagtctccttcatgcagtgcaaaagaaacatcagcacccaaggggaaagatgtggaagag
atgaaaaagttaagaagacttgaacaagctggtattaaagtcatgtcagcagcccagcgc
tatggcagtaaaaagccaatatgtgaagacagtggaagcatcccagacatcatccttcgc
aaggacaacccattcatgacacattatcaaggaaaggattctggctcagaagatgaagca
gccagcagagttcctgatttagaaaaggacgactttgccaccaggagagccagaatgaat
caacctaaacacataattccatttaattcctttgtagttggaccctatacaagtaaagag
aaaggtaaactggaagatattaaaaagccattgcagatggaaaaaaaggaacatgcaaga
agaagacgggtgcacatgacatcagtaaggcaaattggtacaagcaaagagaacccactt
ctgcaaaaggagaagactgagtcacgggaggaacagcaggtgaaagagcttgataatgag
agagatgatttgtcaaaacagaaatctcaaagcatcctgcctcagctacaagaggatgtg
ccttttgtcaatgcctctataacaaaagcagatctggagacctggaaaagattgaaactg
tcaggggagcccagtgaagaagatttcagatgctccagcaacaccctgccaccaactgat
gccacggtgaaagcagtagcccatgatgattttgctgtccgcaaaaccagagcaaacaaa
aaggctggtagccccaagcagaagtttgtgcattttgggccagtaactgagatagatcaa
cagaaatgggacaagctcgttattggcagagcttcatccaagagtggaacagaagaggaa
agcaagaaagatggtgtggagagtctctctggagttaaaagctctccttcaaccactgct
gtcagtcttgggtttgctgaacaacacagcagtgaagtatctgagccagaaaatgagtcc
agtaagggaggagtcaagtcaggtagagattactcttgcaggagaattccatcacctcta
ccagcttctgatgtcatctgtgagaaacaaaccccatggagtctgagcaaacagcaagaa
agcaccgaggaagaatgtgacaggaatttaccagatattgagagagatgatatgttggtt
agaaggatgggaactttttcaaggcgtgccacgagctccattcccataaattgtcctccc
ctgtcactagctcatctgctgcagcagcagcagcaagaggaggttgtagctcgtgaaaag
gatttgaagactctacaggaaggagaaagtactatcagacaagaagaaagccaagaacag
cttgaaatccctcagctgcagagtgatggaacagaaaacatgaaatttccagacccacaa
agagatgacatgttagccagaagaactggagcttttcttaaacagcatgggcccaatgtt
aagcagttccttcccatgccattttcaaagcagcagaataagcagggcacagctacagaa
cttgagaagaaaaccacgaggcctgaaaaatgtccacaagtctacagtaatagctatgga
aaacctgcagtagaatcaccgcaagggcaggaggacagtctcccacgtacaggacaagat
gagattattagaggtgcccaagtggctgaaggtgaccacagtgaagtccaccttagtcaa
acatctaagcttcaggaggttcctgaggaaaacaaaatggaaacactttcatccaaggat
gagcatctgcaaacattcggccccagaactgctgtgtctgatgacgcagagagtatgagt
atgtttgacatgagatgtgaagaagaagctgtggctcagcctcatagcaaagctcgccat
gagaagctgcagaatatacacaaccagctgaaagaggatgagaccagatggcaagatgac
ctggctcggtggaagagtcgtcgaaggagtgcttcacaggatttgattaaaaaggaggct
gagagaaagaaaatggagaggttattggctggagatggaatgagtgagcgcagaaagagc
atcaaaacctaccgagaaattgtggaggagaaagagagaagggagcgggagcttcatgag
gcatacaagaatgcaaagacacaggaggaggctgagagcatcctccagcagtacactgaa
agattcactatcagtgaagctgtccttgagcgtctgcagatgccaaaaattctggaaaga
agccattcagtggaaccaaattccccactgaaagacccaaatcctctgagatatttaagg
caacagtcacttcctgctccaaaattcactgccacaattgaagcaaccattgttcccacc
actgaactagagcccagcagttcaacaggacgcacatctcccagcaaaagtgtctccaag
gctgtacctatgctgacacccaagccttactcacaacccaaaaatacacaggaagtttta
aagaactttaaggtagatggaaaagtcagcatgaatggagaaaatgtcaacggcatggaa
gaaaaggataaagaatgtacaacagtaatatttactccttcaccaaccagatctctgaaa
tctgatggagtagccagaggggacaagcccctggtagagctgaagaaggaccccccaagt
gttgagctcagtttacagaggcctgccactcagagtgtgcacaaagagccaacagcctcc
ccggtggaactggatggagctgacagcctgcaagccaagcgcagccccggcagtgaggca
cctgcccccttggagtgcccatccccagaatttggtttagatcaaaagcaattcaagtca
actgcagcttgtgccagccctgttgtgaagagattagaatttcttcccagtcctgtccct
tcagaggaaactacttcaagcaagaaagatgtgaagaaagctgaagcagagcaacagaag
gacacagcactccctcctacacaggaggtgattaaaacaaaatatctggaagaaaagggg
agtgtagtgctgccatttttaaagaaactacctgaaaccagccaagttactctgcataac
tctggtctacaagagccgccccgcggggccatggttccgcttagggtccgcaacaactgg
cggcgctcacagtttttctcccagtcagctgattctgatactggtgataaatcaaatcgt
ttcaatttttgggcctgggatccagaagaagaacgaaagcgccaggaaaggtggcagcat
gagcaagaacgcttgcttcaggagaagtatcagaaggagcagtgcaagctgaaagaggaa
tgggaaaaggcccagagagaagttgaagaggaggagcgtagatactatgaggaggaacgc
aagataattgaggatactgtagttccgttcattgtttcttcaaactctgctgagctcctc
tcctcttcttcctctaccactgaaggaaacaagatagtgaactcaactgattcaaacagc
tgtccaggggaaggcaaacaaaaagaagttgcaaagcagaaaatgctgctctgggagcag
gacagtatgtcatctctgaaaagcaaggaaagtgaactctggcaagaaaagaggagcagt
ggaaataaaatgttctcaggatacccagagactggtatcttgaaaggaggaagtgaacag
gagcaccacatgccagcgacggagctcagctcacctgccagactgaatctgccgctgact
caggatgagaatgtctcctggagccagcagctgctgacaaagcgatctccacagtgcatg
gaggactttctgcagaaaccattcccaggccagactgtgggacagcaaccaagctccaca
ggggaatcaaggagggttggctatcatgagaccttccgatctgggccatcatctccctgt
tctcctgctgctctaagtcagtcacccaacaggtactaaagatctgtcagcgggaagaag
ctttgttctacctgtggtctccctcttggaaaaggagctgccatgattattgaaacactc
ggtctttatttccatattcagtgcttcaggtgtggtgtttgcaagggacagctgggagat
gcagccagcggcacagatgtcaggattagaaatggtctccttaactgcaacgattgttat
atccgatccagaactgctggacagccaactacattgtga |
|---|
