Cinclus cinclus (white-throated dipper): 134044440
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Entry
134044440 CDS
T10813
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
Membrane trafficking [BR:
ccic04131
]
Endosome - Lysosome transport
Others
Others
134044440 (LRBA)
Endosome - Golgi transport
134044440 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
134044440 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134044440
NCBI-ProteinID:
XP_062349649
LinkDB
All DBs
Position
5:complement(61695882..62060152)
Genome browser
AA seq
2875 aa
AA seq
DB search
MASEGKQVVQPTGDDGGGAAGKEGNAAEGGSVLQPLNPGVPIRGIKMKFAVLTGLVEVGE
VSNRDIVDTVFNLLVGGQFDLEMNFIIQEGEGITCMVDLLDKCDPTCQAEVWSMFTAILK
KSIRNLQACTEVGLVEQVLRRIDRADNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGE
KGRWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRM
DPVNNINVDKDKPYLYCFRTNKGLGYSAHFVGGCLIVTSIKSKGKGFQHCVKFDFKPQKW
YMVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCG
QMTSVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLDEHHKLLLYDGKLSSAIAF
MYNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSALHSIGGVQVLFPL
FAQLDYRQYSSDHIDTTVCSTLLAFIMELLKNSIAMQEQMLSCKGFLVIGHSLEKSSKAH
VTRAVLELCLAFSKYLSNLHNGVPLLKQLCDHVLLNPAIWIHIPAQVQLTLYTYLSTEFI
ATVNIYGAIRRVGTVLLVMHTLKYYYWVVNPQDRSGITPKGIDGPRPTQKEILSLRAFLL
MFIKQLVMKDYGIKEDELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPGSMIPAFDQRN
GLQVVYKLLASQSEGIRVQALKVMGYFLKHLAPKRKAEVMLGHGLFSLLAERLMLQTSLF
TMTTYNVLFEILTEQICTQVIHKQHPDPDSTVKIQNPQILKVIAILIRNSPQCPETLEVR
RAFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCCFNPKTSEEQKITEMVYTIFRILLY
HAIKYEWGGWRVWVDTLSITHSKVTFEMHKENLSQMYKEYQGRGGEGSGVCSATPIRTIS
GISKEAETKGKQQSLELKENAAAPSCITDGDTECRTEKEEKENSSDGGQQTHSVSNHDEK
LEREDMATTQDLKPVPCVEFSPEQETVKPNVSEISTGIAEAIEDSSKVDELVEETVAVTA
ASLAMETPVERETPTSPERLEKSAVEVEDEDDFVDLKDESSLPLPSEELAERNKECGSNA
SKVTRQEETAEKRPETGLIKSEGAEGADEKKQEVTLPETVSSAVPEVVTQLDSAGKKMLK
EGNVITSETRTTVENSSAHVAEPAGASDKRIAKLDVSSVASDTERLELKASTCLEAPLPP
RSMPECGFCVLFLFFFFFFVCKLCLQPSRQQVSSGQELAAPSDGQRRDTRSAVFRIPEFR
WSLMHQRLLTDLLFSIETDIQMWRSHSTKTVMDFVNSSDNVVFVHNTIHLISQVMDNMIM
ACGGILPLLSAATSATHELENIEATQGLSVEASLTFLQRLINLVDVLIFASSLGFTEIES
EKNMSSGGILRQCLRLVCAVAVRNCLECQQHAQMKPIGDTGKNQKTVQGFIGSAKSAAKS
PVDIVTGGISPIRDHDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKY
RDILEPQNERRPPNQSQSLKESENENNVTSAAVVENPSAALGASASTEDSESTAFMQRRD
SGLGEEAAPAQTNSLGGAAEAGPLSVSAGPDAVSEVLCTLSLEVNKSQEGASETGAEESK
SVTSVPAAKNVNVKDILRSLVSTPADGTAGDAALLPPTFLGVLGDGAAAQQPVQFHSFDR
SVVVPTKKSSISSSTAAIGAPANAVSVVSSLDTAQAPDLSGESPGRGSSNSKLPSVPAVS
SVPEDSASNMSITDRLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGLVCMKS
SSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSQTMKEHLVRVANEAEFILSRQ
RAEDINRHAEFESLCAQYSADKREEEKMCHHLITAAKYRDQVTATQLIQKIINILTDKHG
AWGSSAPSRPREFWRLDYWEDDLRRRRRFVRNPLGSTHPEATLRAAGEHAPDEDILVKGK
QSIKSQVLGNQNSESEILLEGDDDIMSFMEEREVENLTGPVSLSTPAQLVAPSVVVKGTL
SITLSELYFEVDEEDPSFKKIDPKILAYTEGLHGKWLFSEIRSIFSRRYLLQNTALEIFM
ANRVGVMFNFPDQATVKKVVNCLPRVGIGTIFGLPQTRRISLASPRQIFKASNMTQRWQH
REISNFEYLMFLNTIAGRTYNDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPVGALN
PKRAAFFAERYESWEDDQVPKFHYGTHYSTASFALTWLLRIEPFTTLFLNLQGGKFDHAD
RTFSSVSRAWRNSQRDTSDIKELIPEFYYLPEIFVNSNSYNLGVMDDGTVVSDVELPPWA
KTPEEFVRINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRALNVFYYLTYEGAVNLSS
ITDSVLREAVEAQIRSFGQTPSQLLIEPHPPRSSAMQVYLLLQSPLMFTEQAQQDVIMVL
KFPSNSPVAHVAANTQPGLATPAVITVTANRLFAVNKWHSLPGAVQDQPYQLPVEIDPLI
ASNTGMHRRQITDLLDQSIQVHSQCFVITSDNRYILVCGFWDKSFRVYSTDSGKLMQVVF
GHWDVVTCLTRSESYIGGNCYILSGSRDATLLLWYWNGKTNIIGDNPRASDFATPRAVLT
GHDYEITCAAICAELGLVISGSKEGPCLIHSMNGDLLRTLEGPERLQGPESCLRPKLIQA
SREGHCVIYYENGLFCVFSVNGRLQATMETDDKIRAIQLSRDGQYLLTGGDNGVVMVWQV
WDLKRLFAYPGCDAGIRSMALSYDQRCIMTGMASGSIVVFYNDFNRWHHEYQTRY
NT seq
8628 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgaaggcaagcaagttgttcagccaacaggtgatgatggaggaggagcagcg
ggaaaagaaggaaatgctgctgaggggggaagtgtgctgcagcctttgaatccgggagtc
cccatccgaggcatcaagatgaaattcgccgtgctgacgggactggtggaagttggtgaa
gtgtccaacagagacatagttgacactgtgtttaacctgctcgtcggcggccagtttgac
ttggaaatgaactttatcatccaagaaggagagggcatcacctgcatggtggacttactg
gataagtgtgatcccacctgccaggctgaggtttggagcatgttcacagcaatcctgaag
aaaagcattcggaatctccaggcgtgcacggaggtggggctcgtggaacaagtgctcagg
aggatcgacagagctgacaacatgattgcagatctcctagtggacatgctgggtgtgttg
gctagctataacctgacagtccgagagctgaagttattcttcagcaagctgcaaggagaa
aaagggagatggccaccacatgctgggaagttactgtctgtgttgaaacacatgcctcag
aagtatggacctgatgccttcttcaactttccaggaaaaagtgctgcagctattgcctta
cctcctatagccaagtggccataccagaatggatttactttccacacttggctgagaatg
gatcctgtaaataatattaatgtggataaggataagccttatttatattgttttcgaaca
aacaaaggacttggttattctgctcactttgttggaggctgcttgattgtaacgtccata
aaatcaaaaggaaaaggtttccagcactgtgtaaaatttgatttcaagccacaaaagtgg
tacatggtgactatagtgcacatctataaccgctggaagaacagcgagctccggtgttac
gtgaacggggaactggcatcttatggggaaataacatggtttgtcaacaccagtgataca
tttgacaaatgtttcctgggttcttcagaaacagcagatgccaatcgagtgttttgtggg
cagatgacatctgtttacctttttagtgaggctctcaatgctgctcagatctttgccatt
tatcagcttggcctgggatataagggaacattcaagttcaaggcagaaagtgacctcttc
cttgatgaacatcacaaattattgctgtatgatggcaaactctccagtgctattgctttt
atgtacaatccaagggctacagatgcacagctgtgtctagagtcatcccctaaggataac
ccttctatttttgttcattcaccacatgccctcatgctgcaggatgtgaaagcagtcttg
acgcactccatccaaagtgccctgcactccattggaggagtacaggtgcttttccctctc
tttgcacagttggactataggcaatattcctcagaccacattgatacaactgtttgctct
actttactggcattcatcatggagttgttgaagaactctattgctatgcaagaacagatg
ctttcctgtaaaggcttccttgtgatagggcacagcctagagaagtcttccaaagcccat
gttaccagagccgtgctagaactttgccttgccttctcaaaatacctgagcaatttacac
aatggggtgcccctgctgaagcagctgtgtgatcatgttctcctgaatcctgcaatatgg
attcatatcccagcacaggttcagctgaccctgtacacttacctgtctactgagttcatt
gccactgttaacatttatggagcaatccgacgggttgggacagttcttttggtcatgcac
accctcaagtattattactgggtggtgaaccctcaggatcgcagtgggataactcccaag
ggcatagatggtccacggcctactcagaaggagattttatccctgcgagcatttttgttg
atgtttattaaacagctggtgatgaaggactatggaataaaagaagacgaattgcaggct
atcctcaattacctgcttactatacatgaggatgacaatctaatggatgtcttgcagttg
ctggttgctctgatgtcagagcatcctggttctatgatccctgcatttgatcagagaaat
ggattacaggttgtatacaagctcttagcatcacaaagtgaaggcatcagggtgcaagct
ctgaaagtgatgggatatttcttaaagcatcttgctccaaagaggaaagctgaagtcatg
cttggacatggattgttctctttgttggctgaaaggctgatgcttcagacaagtttattc
accatgaccacatacaatgtcctgtttgagattctgactgaacagatttgcactcaagta
atacataaacaacatcctgacccagattctacagtgaagatacaaaatcctcagattttg
aaggtaattgcaatcctgatccgtaattctccacagtgtccagaaactctggaggtccgg
agagcctttctctcggatatgattaaactgtttaataacagcagagagaacaggaggagt
ttgttgcagtgctctgtctggcaggaatggatgctttccctttgttgttttaacccaaag
acttctgaggagcagaagataactgagatggtgtacaccatatttcggattttgctgtac
catgcaataaaatatgagtggggtggctggcgtgtgtgggtggatacactgtcaatcaca
cattcaaaggtaacttttgaaatgcacaaagagaatctttcccaaatgtacaaggagtac
caagggagaggaggtgaagggagtggagtgtgttctgcaactccaattagaacaatctct
ggtattagcaaagaagctgaaaccaagggaaaacaacaatctttggagttaaaagagaat
gctgctgctccttcttgcattactgatggtgatacagagtgcagaactgaaaaagaagag
aaagaaaactcatcagatggtggccaacaaactcattcagtgtctaatcatgacgagaaa
ttagaacgggaggatatggctactacacaggatttaaaaccagtgccttgtgtggaattt
tctccagaacaagaaacagtgaagcccaatgtctcagaaatcagtactggaatagctgaa
gcaattgaagattccagcaaagttgatgagcttgtggaagaaacagttgctgtcactgct
gcttctttagccatggaaactcctgtggaaagagaaactcccacaagtccagaaagactg
gaaaaatcagcagtagaggtggaagacgaagatgactttgttgatttgaaagatgaaagt
agtttgcctttaccttcagaagagcttgcagaaaggaacaaggaatgtggctctaatgca
agcaaagtgacaaggcaggaagaaacagcagagaagagacctgaaactggacttataaaa
tctgagggtgctgaaggtgcagatgagaagaagcaagaagtgactttgccagagacagtg
agttctgcagttccagaagtagtaactcagctggattcagcaggaaaaaagatgctgaag
gaaggaaatgtaattactagtgaaactagaacaactgtggaaaactcaagtgcacacgtg
gcagagcctgctggagcctctgacaagagaattgccaagcttgatgtttccagtgttgca
tcagatacagaaagactggagctgaaagctagcacgtgtctagaagcacctctgcccccc
agatccatgcctgagtgtgggttttgtgttttgtttcttttttttttttttttttttgtc
tgcaaactgtgccttcagccctcaaggcagcaggtttcctcaggacaggagctggctgct
ccatcggatgggcagaggagggacacgaggtcagctgtgttccgtattcccgagttccgg
tggtcgctgatgcaccagcggctgctcacagacctgctcttctccatagaaacagacatt
cagatgtggagaagtcattctacaaaaactgtgatggactttgtgaatagcagtgacaat
gtggtgtttgtgcacaacacgatccacctcatctctcaagtgatggacaacatgatcatg
gcctgtggtggtatcttgccattgctttctgctgccacatctgctactcatgagttggag
aatattgaggcaactcaaggactttcagtagaagcatctttaacatttcttcagagatta
atcaaccttgtggatgtgctaatttttgcaagctctcttggtttcactgaaattgaatct
gagaagaatatgtcgtctggaggaattctgcgacaatgtcttcgtctggtatgtgcagta
gcagtaagaaattgcttggagtgtcagcaacatgcacagatgaagcctattggagatact
gggaagaaccaaaaaacagttcaaggctttataggatcagcaaagtctgcagcaaagagt
cctgtggacattgtgaccggtggcatttctccaatacgggaccatgacagacttctgcag
gatatggatattaatcgtctccgagcagtagtgttcagagatatagaggatagtaaacag
gctcagtttttggctttggctgttgtatattttatttctgtgctcatggtttcaaaatac
agagatatactggaaccccagaatgaaagacggccaccaaaccaaagccagtcactcaag
gaatcagaaaatgaaaataatgtgacttctgctgcagttgtggaaaacccatctgcggct
cttggtgcttcagcctctactgaagattcagaaagtacagcatttatgcagagaagggat
tctggtcttggggaggaagcagctccagcacaaacaaacagtttgggtggtgctgctgag
gctggacctctgagtgtcagtgcaggcccagatgcagtcagtgaagtcctgtgcacactc
tcactagaagtcaataaatctcaggagggcgcaagtgagacaggagctgaagagagtaaa
tctgtgacttctgtgccagctgcaaaaaatgtcaacgtgaaggacatcttgagaagcctg
gtgagcacaccagctgatgggactgcaggggatgctgctcttctgccaccaaccttcctt
ggagtccttggtgacggagctgctgctcagcagcctgtgcagttccattcctttgacagg
agtgttgttgtaccaacgaagaaatcgagcatttcctcctctacagctgctattggtgct
cctgcaaatgctgtcagtgtggtttcttctttagatacagcccaagccccagatttgtca
ggagaatctcctggaaggggatcatctaattcaaaattgccatctgttcctgcagtttct
tcagtgcctgaggattctgcctccaatatgagtattacagacaggcttgagcatgctttg
gaaaaagctgccccacttctgagagagatttttgtggattttgctccctttctttctcgg
actctcttgggcagccatgggcaggagttgctgatagaaggtcttgtgtgcatgaaatct
agcagttcagttgtggagctggtgatgctcctttgctctcaggagtggcaaaactctata
cagaagaatgctggcctggcctttattgagcttgtcaacgaaggcaggttgctgagtcaa
accatgaaggagcatctggtacgagtggctaatgaagcagaatttatcctgagcagacag
agggcagaggacattaaccgccatgctgaatttgagtcactgtgtgcccagtactctgca
gacaaacgagaagaagaaaaaatgtgtcatcatttgatcacggcagccaagtaccgggac
caggtgactgcaacacagctaatacagaaaattatcaacatcctcacagacaagcatgga
gcctggggaagctctgcaccaagtcgtcctcgtgagttctggcgcctcgactactgggaa
gatgacttgcggcgccggcgacgatttgtgcgcaaccccctcggatcgacacatcctgaa
gcgacactcagggcagccggagagcatgctcccgatgaggatatacttgtcaaaggaaag
cagtccatcaagagtcaagttttaggaaaccagaactctgaaagcgagattctcttggaa
ggtgatgatgatatcatgtccttcatggaggaaagagaagtggagaacttgacaggtcca
gtgtccctcagcacaccagctcagcttgtggcaccctctgtagtagtgaaaggcaccctt
tctatcactctttctgagctctactttgaggtggatgaagaagatcctagttttaagaaa
atcgacccaaagattctggcatatacagaaggactccatggaaaatggcttttctcagag
attcgatcgatcttttcccgacgttacctcttgcaaaatacagcactggagatattcatg
gcaaatagagtgggtgtcatgttcaacttccctgaccaagcaacagtaaagaaagtggtt
aactgtctacctcgggttggtattggtaccatctttggactgccccagaccagacgcatt
tctttggctagtccacgacagatcttcaaagcttccaacatgacccagcggtggcaacac
cgagagatttccaactttgaatatttgatgtttctaaacactatagcaggtcgaacttac
aatgatttgaatcagtaccctgtcttcccttgggttatcaccaactatgagtcagaggag
ttggaccttacacttcctagcaacttcagggatttgtcaaagcctgttggagctttgaac
ccaaagagagcagcattctttgccgagcgatacgaatcgtgggaagacgatcaggtccca
aaatttcactatggcactcattattcaacagcaagttttgcactcacgtggttgttaagg
attgaacccttcacaacacttttcctgaatctacaaggtggaaagtttgatcatgcagat
aggactttttcctctgtttcaagagcgtggcgcaacagtcagcgtgacacttctgacatc
aaggaattgattcctgaattttattacctcccagagatatttgtcaacagcaacagttac
aacctgggagtgatggatgatggaacagtggtgtctgatgttgaacttccaccatgggcc
aaaaccccagaagaatttgttcgcataaacaggctggcattagaaagtgagtttgtttcc
tgccagcttcaccagtggattgatctgatttttggctacaaacaacaagggccagaggct
gttagggccctgaatgtattctactatttgacttatgaaggagctgtcaatttaagttca
ataacggattctgtactgagagaggctgtggaagctcaaatacgaagttttggacagacc
ccttcccagctgctcatagaaccacatcctccgagaagttctgccatgcaggtgtatctc
ctcctgcagagccccttgatgttcacagagcaagcccaacaggacgtgatcatggtcctg
aagttcccgtccaactccccggtcgctcatgtggccgccaacacccagcctggcctggcc
actccggccgtgatcacggtcactgcaaacaggctctttgctgtgaacaagtggcacagc
ctccctggtgctgtacaagaccagccttaccagctgccagtggaaatcgatcctctcata
gccagcaatacaggtatgcacaggaggcaaatcactgaccttctagaccaaagcattcag
gtacattcccaatgttttgtcatcacttctgacaatcgttacatcttggtctgtggcttc
tgggacaagagtttccgtgtttactctactgactcaggtaaactgatgcaagtagtgttt
ggccactgggatgttgtgacctgtctgactcgttccgagtcctacattggagggaattgt
tacatcctctcaggatcacgggatgcaaccttgctgctctggtactggaatggcaaaacc
aacatcatcggtgataacccaagagccagtgattttgcaactcctcgagctgttctgaca
ggacatgactatgagatcacctgtgctgccatttgtgctgagcttggcctggtaataagt
ggttcaaaagaaggaccatgtctcatacattctatgaatggagatctactgaggacgttg
gaaggtcctgaaagattacaaggtcctgaaagctgcctgagaccaaaacttattcaagct
tccagagaaggccactgtgtcatatattatgaaaatggcctcttctgtgtgttcagtgtg
aatggaagactgcaggccactatggaaacagatgataagataagggccattcagctgagt
cgggatggacagtatctgctcacaggtggagacaatggggtcgtcatggtgtggcaggtg
tgggacctcaaacggctctttgcttacccagggtgcgatgctggaatccgatccatggcc
ctgtcctatgaccaaaggtgtataatgactggaatggcatccgggagcatcgtggttttt
tacaatgatttcaatcgctggcaccacgagtaccagaccaggtactga
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integrated database retrieval system
