Cinclus cinclus (white-throated dipper): 134044500
Help
Entry
134044500 CDS
T10813
Name
(RefSeq) FHF complex subunit HOOK-interacting protein 1A-like
KO
K26420
FHF complex subunit HOOK interacting protein 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134044500
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccic04812
]
134044500
Membrane trafficking [BR:
ccic04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
FTS/Hook/FHIP (FHF) complex
134044500
Cytoskeleton proteins [BR:
ccic04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
FTS and Hook-interacting proteins (FHIP)
134044500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAI16-like
DUF5917
KELAA
DUF7421
Motif
Other DBs
NCBI-GeneID:
134044500
NCBI-ProteinID:
XP_062349722
LinkDB
All DBs
Position
5:complement(46476564..46508081)
Genome browser
AA seq
1003 aa
AA seq
DB search
MSSGTSISRNRQAPRLEGVDPETCMIVFRTHWAQVLKILEKHDPLKNTQAKYGAILPDEA
STVQNYVEHMLFLLIEEQAKDASMGPILEFVVSENIMEKLFLWSLRREFTDETKIEQLKM
YEMLITQSHQPLLHHKPILKPLMMLLSSCSGTTTPTVETELVVLLSQLCSIIAKDPSILE
LFFHTSEDQGAANFLIFSLLIPFIHREGTVGQQARDALLFIMSLSAENNLVANHIAENTY
FCPVLATGLSGLYSSLPTKLEEKGEEWHCLMKDDWLLSPALVQFMNSLEFCNAVIQVAHP
LIRNQLVNYIYNGFLVPVMAPALHKVTVEEVMTTTAYLDLFLRSVSEPDLLKIFLRFILL
HRHENVHILDTLTSRINTPFRLCVVSLALFRTLIGLHCEDVMLQLVLRYLIPCNHMMLSQ
RGAVKERDCYSVSAAKLLALTPLCCSTGITLTLESQRKDYILWTKPAQTKDPGRHSSESA
CIVEYGRAVDISYLQYLGEAQEAIMQCMKDCKVWSALYDGVNPDPDTFMQTLAEENSTGV
EHAIFRLQQRTPSTCSSAQEALFSEKMQLELEWDDSYDTGISPGSNVSSPQPYDDMGSTE
VQPLAEPPKHIQEMKKNAIMVIKGSYIEESDFQDDVMIYRLCAQKDTQDDDSSKEKSLNV
AREHMVQSQTIVSGSFAKTQLEMDLDEHSKRNSSSTKGVNREQINQNMSEIDPQPDLKIS
SQEAGSNLSVKLLSTDDEDFIAQYDRIIKELDPKSISLEEQKLDAPDPVSPAEEEEDFEN
FSADTPSAKSVSSPFGPKENVSPKHSSRSQSAPFTGPFISVVLSKLENMLENSLHVNLLL
IGIIAQMASYPQPLLRSFLLNTNMVFQPSVHSLYKVLASVKNKIEHFASIEKDFPGLLLE
AQQYLLFRMDMSDAAEELLTKGNVQHSSNTGKGKNLPEAYPAVLQPFLGQKGKKSLTHPS
LPAHVRNAVLAAALFPEFLKELAALAQEHSILCYKKLGDFEDY
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgggacaagtatcagcagaaataggcaggctcccagactggagggtgttgac
ccagaaacatgcatgatagtgtttagaacacactgggcacaggttctgaaaatcttagag
aagcatgatcctttgaaaaatactcaggcaaagtacggggcaatcttacctgatgaggcc
agcactgtgcagaattatgtggagcacatgcttttcttattaattgaggagcaagcaaaa
gatgcctcaatggggcctattctggagttcgtggtctcagaaaacatcatggagaagctt
ttcctttggagcctacggcgagagttcaccgatgagacaaaaattgagcaactcaaaatg
tacgaaatgctcataacccaatctcatcagcctttgctgcatcacaagcccattttgaag
cctttgatgatgttgctgagttcctgctcaggaacaaccactccaacagtggaaacagag
ttggttgtcctcttgagccagctctgctcaataatagccaaagatccctccattctagaa
ctgtttttccatactagtgaggaccaaggagctgccaatttcctaattttttccctgctg
atccccttcatccatcgagaaggaacagtaggccaacaggcccgggatgcactgcttttc
ataatgtctctgtctgcagaaaacaaccttgttgcaaaccacatagcagaaaacacctat
ttttgcccagtgctagcaacaggactaagtggcctctattcatctttgcctacaaagctg
gaagaaaaaggagaagaatggcactgtctgatgaaagatgactggcttttgtcaccagcc
cttgtacaattcatgaattctcttgaattttgcaatgctgtgatacaggtggcacatccc
ttgatacgcaaccagcttgtgaattacatttacaatggatttttggtgccagtaatggct
cctgcactccataaggtgactgtggaggaagtgatgactacgacagcatatctggatctc
ttcttgcgcagtgtttcagagccagatctcctcaagattttcctccgctttattttgctg
caccgacacgaaaatgttcatatcctggatacacttaccagcagaatcaacacaccattc
cggctctgtgtggtctccttggcattgttcagaacgctcattggcttgcattgtgaagat
gtgatgttgcagctagttttaaggtatctgatcccatgcaaccacatgatgctgagccag
cggggagctgtgaaagagagagattgttactctgtatctgctgcaaaactgctggccctg
acacctctgtgctgttccactggaatcactttgacacttgaaagccaaagaaaagactac
attctctggacaaaaccagcacaaactaaagatcctggtagacactcttctgaatctgct
tgcattgtggaatatggaagagctgtggacatcagctacttgcagtacctgggggaagct
caggaagccatcatgcagtgcatgaaagactgtaaggtttggtctgccttatatgatgga
gtaaatcctgatccagacacctttatgcagacacttgcagaggagaacagtacaggtgtg
gaacacgccatatttcggctccagcaaaggacacctagcacatgtagctctgcacaagaa
gctctgttcagtgagaagatgcagctggagctagaatgggatgatagctatgacacaggg
atttctcctggttctaatgtgagctcaccacaaccatatgatgatatgggaagcacagaa
gtacagccacttgcagagccaccaaaacacattcaagaaatgaaaaaaaatgccattatg
gtcatcaaaggctcttacatagaggagtcagattttcaggatgatgttatgatttatagg
ttgtgtgcccagaaggatactcaagatgatgacagctccaaggaaaaatccttaaatgta
gccagagaacacatggtgcagagccagaccatagtcagtgggtcttttgcaaagacccag
ctggaaatggacttggatgagcacagtaagagaaattcaagctcaactaaaggtgtaaat
agagaacaaataaaccagaatatgtctgagattgatccacagccagacttaaagatttct
tctcaggaggcaggtagtaacttaagtgtaaaactgctgagcacagatgacgaggatttc
attgcacaatatgacagaattattaaggaactggatccaaagagtataagcttggaggag
cagaagttggatgctcctgatcctgtctctccagcagaagaagaggaggactttgagaat
ttctcagcagataccccttctgcaaagagtgtatcatctccctttggaccaaaggagaat
gtctctcccaagcactcttcaaggagccagagtgcaccatttacagggccattcatcagc
gtagtattgtcaaagctggagaacatgctggagaattccttgcatgtaaatttgctgctt
attgggattattgctcagatggcaagttatccacagccacttcttcgctcctttctgctc
aacaccaacatggtgtttcagccaagtgtgcactcactctataaggtgctggcatctgtg
aaaaataagattgaacattttgcttccattgaaaaagacttcccaggtcttctcctggag
gcccaacagtacttgctttttcgtatggacatgtctgatgctgcagaagagttgctcacc
aaaggtaatgtccagcacagcagcaacacagggaaaggaaagaatcttcccgaagcttac
ccagctgtactgcagcctttcctgggacagaaaggaaagaaaagcctgactcatcccagc
cttcctgcacacgtgaggaatgctgtacttgcagctgcccttttcccagagttcctgaag
gagttggcagctctagcccaggaacattccattttatgttacaaaaaattgggggatttt
gaagattattaa
DBGET
integrated database retrieval system
