Cinclus cinclus (white-throated dipper): 134044520
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Entry
134044520 CDS
T10813
Symbol
PITX2
Name
(RefSeq) pituitary homeobox 2 isoform X1
KO
K04686
paired-like homeodomain transcription factor 2
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134044520 (PITX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccic03000
]
134044520 (PITX2)
Transcription factors [BR:
ccic03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
134044520 (PITX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
XRCC4_C
Motif
Other DBs
NCBI-GeneID:
134044520
NCBI-ProteinID:
XP_062349743
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Position
5:48937237..48948292
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AA seq
359 aa
AA seq
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MESNCRKLVSACVQLGAHVDFGVLLPMNCMKDPLSLERLGAGNKLCSSSPSSSSSSSSSC
HHHQPALAMATALAPGQARSSLESAKHRLEVHTISDTSSPEAAEKDKSQQSKNEDAGPED
PSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRA
KWRKRERNQQAELCKNGFGPQFNGLMQPYDDMYPGYSYNNWAAKGLTSASLSTKSFPFFN
SMNVNPLSSQSMFSPPNSISSMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSNPSLNSAVP
TPACPYAPPTPPYVYRDTCNSSLASLRLKAKQHSSFGYASVQNPASNLSACQYAVDRPV
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggagtccaactgccgcaaacttgtctccgcctgtgttcagctaggcgcgcacgtagac
tttggcgtccttttgccgatgaactgcatgaaggacccgttaagcctggagcgcctggga
gccgggaataagctgtgctcctcctcaccttcttcctcctcctcctcttcatcatcctgc
catcaccaccagcccgcgctggccatggcgacggcgctggcgccggggcaggcgcgctcc
tccttggagtctgccaagcaccggctggaggtgcacaccatctccgacacctccagcccc
gaggccgcagagaaggacaagagccaacagagtaagaatgaggatgcggggcccgaggac
ccctccaagaagaagaggcagcggcggcagcggactcacttcactagccaacagttgcag
gagctggaggccaccttccagcggaatcgctacccggacatgtccacacgggaggagatc
gccgtctggaccaacctcaccgaggccagggttagggtttggttcaagaaccgcagagcc
aaatggagaaagagagaaagaaaccagcaagccgagctttgcaaaaacggcttcggtccg
cagttcaacggcctcatgcagccctacgatgacatgtaccctggctactcatacaacaac
tgggcagccaagggcctgacctccgcttccctctccaccaaaagctttccttttttcaat
tccatgaatgtcaaccctctgtcttctcagagcatgttctcccctccaaactccatatcc
tccatgagtatgtcttcaagcatggtaccttctgcagtcaccggggtgcccggctccagc
ctcaacagcctgaataacttgaacaacttgagcaatccctccctgaattctgcagtgcca
acgccagcctgtccttatgctcctccaacacctccgtatgtttatagggacacatgtaac
tcgagcttggcgagtctgagacttaaagccaagcagcactccagttttggctatgccagt
gtgcagaaccccgcttccaacctgagtgcttgccagtatgcggtggacagacccgtgtga
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