KEGG   Cinclus cinclus (white-throated dipper): 134044540
Entry
134044540         CDS       T10813                                 
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
  KO
K11988  sonic hedgehog
Organism
ccic  Cinclus cinclus (white-throated dipper)
Pathway
ccic04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:ccic00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    134044540 (SHH)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ccic01002]
    134044540 (SHH)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:ccic00536]
    134044540 (SHH)
Peptidases and inhibitors [BR:ccic01002]
 Cysteine peptidases
  Family C46: hedgehog family
   134044540 (SHH)
Glycosaminoglycan binding proteins [BR:ccic00536]
 Heparan sulfate / Heparin
  Morphogens
   134044540 (SHH)
SSDB
Motif
Pfam: HH_signal Hint Peptidase_M15_3 Ribosomal_S6e Vint
Other DBs
NCBI-GeneID: 134044540
NCBI-ProteinID: XP_062349779
LinkDB
Position
1:complement(7796621..7806792)
AA seq 421 aa
MDEMLLLTRILLVGFICALLVSSGLTCGPGRGIGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLETGGTKLVKDLRPGDRVLVADTEGRLLYSD
FLTFLDREDGSHKLFYVIETRQPRARLLLTAAHLLFVAPQQNQSHAGAASSRALFASRVR
PGQRIFVLGEGGQQLLPAAVHRVSLREEASGAYAPLTAQGTILIDRVLASCYAVIEEHSW
AHWAFAPFRLLQGVLAALCPSPMGDPTAPGIHWYSRLLYRIGSWVLDSDSLHPLGMMVSS
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggacgaaatgctgctgttgacaagaattctcttggtgggcttcatctgcgctctttta
gtctcctctgggctgacttgtggaccaggcaggggcattggaaaaaggagacaccccaaa
aaactgacccctttagcctataagcagtttattcccaatgtggcagagaagaccctaggg
gccagtggaagatatgaagggaagatcacaagaaactccgagagatttaaagaactaacc
ccaaattacaaccctgacattatttttaaggatgaagagaacacgggagctgacagactg
atgactcagcgctgcaaggacaagctgaacgctctggcgatctcggtgatgaaccagtgg
ccgggggtaaagctgcgggtaaccgagggctgggacgaggacggccaccactccgaggag
tccctgcactacgagggccgcgccgtggacatcaccacctcggaccgggaccgcagcaag
tacggcatgctggcccgcctggccgtcgaggctggcttcgactgggtctactacgagtcc
aaggcgcacattcactgctccgtcaaagcagaaaactcggtggcggccaaatctgggggt
tgcttccctggctcggccacggtgcacctggagacaggcgggaccaagctggtgaaggac
ctgaggcccggagacagggtgctggtggccgacacggaaggccgtctgctctacagcgac
ttcctcaccttcctggaccgcgaggacggctcccacaagctcttctacgtcatcgagact
cggcagccccgggcccggctgctgctgacggccgcccacctcctcttcgtggccccccag
cagaaccagtcccacgcgggcgccgccagcagccgggcgctgttcgccagccgcgtgcgg
ccgggccagcggatcttcgtgctgggcgagggcgggcagcagctgctgccggcggccgtg
caccgcgtgtcgctgcgggaggaggcgtcgggcgcttacgccccgctgaccgcccagggc
accatcctcatcgaccgcgtgctggcctcgtgctacgccgtcatcgaggagcacagctgg
gcgcactgggccttcgctcccttccgcctgctccagggcgtgctggccgccctctgcccc
tccccgatgggagaccccacggcccccggcatccactggtactctcggctcctctaccgc
atcggcagctgggtgctggatagtgactctctgcacccgctgggcatgatggtgtcatcc
agctga

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