Cinclus cinclus (white-throated dipper): 134044614
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Entry
134044614 CDS
T10813
Symbol
PKD2
Name
(RefSeq) polycystin-2
KO
K04986
polycystin 2
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccic03037
]
134044614 (PKD2)
04040 Ion channels [BR:
ccic04040
]
134044614 (PKD2)
Cilium and associated proteins [BR:
ccic03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
134044614 (PKD2)
Ion channels [BR:
ccic04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
134044614 (PKD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
SU10_portal
Motif
Other DBs
NCBI-GeneID:
134044614
NCBI-ProteinID:
XP_062349875
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Position
5:complement(62780130..62799767)
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AA seq
830 aa
AA seq
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MDVEWGSRAASSLGSGAGVPAGGGRRARRGPEGPGRLPGPPDGTAPRKAAWAKRLARRLR
GLWGTRLMEESNTSRERYLKSVLRELITYMVFLMILCVLTYGTVSSSMYYYTRVMSQLFL
ETPVSKTERTDFKTLSTMDDFWKFTEGPLLDGLYWEMWYNNKTMAENKSFIYYENLLLGV
PRIRQLKVRNGSCSIPEDLRDEIKDCYDVYSVANEDTAPFGLRNGTAWTYTNEKDLNGSS
HWGLIATYSGAGYYQDLSRTREVTALQIASLKKNLWLDRGTRAAFIDFSVYNANINLFCV
VRLLVEFPATGGLVTSWQFQPVRLIHYISTFDFFLAACEMSFCLFVLYYMVEEILEIRIH
RLCYFRSLWNCLDILIIVLSVVAIGISIYRTSTVDMLLKKLLEDQNSFPNFEPLAYWQMQ
FNNIAAVTVFFVWIKLFKFVNFNRTMSQLSTTMSRCVKDVIGFAIMFFIIFLAYAQLAYL
VFGTQIDDFSTFQDCIFTQFRIILGDFNFTEVEEANRILGPIYFTTFVFFMFFILLNMFL
AIINDTYSEVKSDMAQQKAEMELSDLIRKGYNKAMIKLKLKKTTVDDISESLRQGGGKLN
FDELRQDLKGKGHTDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLEKEREDLDLDRSSLP
RPLSSRSFPRSLDDSEEDEDEDSGHSSRRRGSSSSGVSYEEFQVLMRRVDRMEHSIGSIV
SKIDAVIVKLEAMERAKLKRRDVLGRLLDGVTEDERLGRDSEIHREQMERLVREELERWE
SDDTASQMSHRLGTPLGLSGQPRSRSSRPSSSQSDGLDAAAANGGNSIHV
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggagtggggcagccgggccgcgtcgtcgctgggcagcggcgcgggggtcccg
gcgggcggcgggcggagggcgcggcggggccctgaggggccgggccgcctcccggggccg
cccgatggaaccgcgccacgcaaagcggcctgggccaagcgcctggcgcggagactgcga
ggtctgtgggggacaagactcatggaagagagcaacaccagcagagagcggtacttgaaa
agtgttttacgggagctgatcacgtacatggttttcctcatgatcctgtgtgtattgact
tatgggacagtgagttccagtatgtactattatacaagggttatgtcacagctcttcctg
gaaacacctgtgtcaaaaacagagagaactgatttcaaaactttgtccacaatggatgac
ttctggaagttcacagaaggccctttgctggatggtctttactgggagatgtggtacaac
aacaaaaccatggcagaaaacaaaagcttcatttattatgagaacctgctcctaggggtg
cctcgcattcggcagctgaaagtcaggaatggttcgtgctccatacctgaagatttaagg
gatgaaatcaaagactgctatgatgtctattctgtagctaatgaagatactgctcccttt
gggctccgcaatggaactgcctggacgtacaccaatgagaaggatttgaatgggagcagt
cactggggcttgattgccacgtacagcggggctggttattaccaggacctctcgaggacc
agagaagtgacagctctgcagattgcaagcctgaagaagaacctgtggctggacagaggg
accagagcagccttcattgatttctctgtgtacaatgcaaacatcaacctattctgcgtg
gtcaggttgctagtggagtttccagccactggaggcctggttacatcttggcagtttcag
cctgtgaggctgattcattacatctcgacttttgattttttcctggcagcctgtgaaatg
tccttctgtctttttgttctgtattatatggtggaagagatcttagaaattcgcattcat
agactgtgctacttcaggagtctttggaattgccttgatatccttatcattgtgctgtct
gtggtagctataggaattagcatctataggacatcaactgttgatatgctcctgaagaag
ctgctggaagatcagaactcattccccaattttgaacccttggcatattggcaaatgcag
ttcaacaacattgctgcagtcacggtgttttttgtctggattaagcttttcaaatttgtt
aacttcaacagaacaatgagccagttatccaccacgatgtctcgctgcgtcaaagatgtc
attggctttgccattatgttttttattattttcttagcatatgctcagttggcctatctt
gtctttggcactcaaattgatgacttcagtaccttccaggactgcatatttactcaattc
cgcatcattttgggagacttcaacttcacagaggttgaagaagccaatcgaattttggga
cccatttattttactacatttgtgttctttatgttcttcattcttttgaatatgtttttg
gccattatcaatgatacctactctgaagtcaaatcagatatggcacaacagaaggcagaa
atggaattgtctgaccttatcaggaagggctacaacaaagccatgatcaaacttaaactg
aagaagactactgttgatgacatttcagaaagtctgaggcaaggtggaggaaaactcaat
tttgatgaactccggcaggatctcaaagggaaggggcacactgatgcagaaattgaagca
atatttaccaaatatgatcaggatggggaccaggaattgacagagcatgaacatcagcag
atgagagatgacctggagaaagagagggaggatctggacctggataggagctctctgcca
cgtcctctgagcagccgcagcttccccaggagcttagatgactctgaggaggatgaggat
gaagacagtgggcacagctccaggaggaggggcagcagctctagtggggtttcctatgaa
gagttccaagtactcatgaggcgggtggatcgcatggagcattccatcggcagcatcgtc
tccaagatcgatgctgttatcgtgaagctggaagccatggagagggccaagctaaaaagg
agagatgtgttgggaaggctgttagatggagtgacagaggatgaaagactgggccgggac
agcgaaatccacagggagcaaatggagcggttggtgcgggaggagctggagcgctgggag
tcggacgacacggcctcccagatgagccataggctgggaacacccctggggctgagcggg
caacctcgctccaggagctccaggccatcctcttcccagtctgatggcctcgatgcagca
gcagcaaacgggggcaacagcatccatgtgtag
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