Cinclus cinclus (white-throated dipper): 134044670
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Entry
134044670 CDS
T10813
Symbol
EXOSC9
Name
(RefSeq) exosome complex component RRP45 isoform X1
KO
K03678
exosome complex component RRP45
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134044670 (EXOSC9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccic03019
]
134044670 (EXOSC9)
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
134044670 (EXOSC9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
134044670
NCBI-ProteinID:
XP_062349979
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All DBs
Position
5:complement(69885744..69890483)
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AA seq
441 aa
AA seq
DB search
MKATPLSNCERRFLLRAVQEKKRLDGRQCYDYRNIRVSFGADRGCCIVELGRTRVLAQVS
CELVPPKPSRPTEGVLFFNLELSPMAAPGLEPGRQSELLVSLNRLLERCLRDSKCIDTES
LCVVAGEKVWQIRLDMHLLNHDGNITDAASIAGIVALCHFRRPDVSVQGEEVTVYTPEER
DPVPLSIHHMPICVSFAFFHQGTFLLVDPTEREERVMDGLLVIAMNKHDEICTIQSSGVV
MLLQDQILRCSKITAVKVAEITELIQKALENDQKARKEGGKFGFAESIPNQRITAFRMES
AAVDTNDVEEQAGEIIAKADPPSEVFANPVLHTPGTAQIGEGIESSWGDLEESEKEEAAE
EEGESEAAAFECEKVETEDTSTVRETKSDEPIVLSDSEEEEVVILEPQELPRKTRTQTSS
KQENPSKKAFNKRRRKKRTSR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgacgccgctctccaactgcgagcggcgcttcctcctgcgcgccgtccaggag
aagaagcgcctggacgggaggcaatgctacgactaccgcaacatccgcgtctccttcggc
gccgaccgcggctgctgcatcgtggagctgggcaggaccagggttcttgcacaggtctcg
tgtgagctcgttccccctaagcccagtcggcccacggaaggtgtgctcttctttaatctg
gagctctcacccatggctgcacctgggctggagcctggcagacaatccgagttactggtg
tcactgaaccgactgctggagcgatgcctcagggattccaaatgcattgacactgaatct
ctctgcgttgttgctggtgaaaaggtttggcaaattcggctggacatgcatctgttgaac
catgatggcaacatcactgatgctgccagcatagcagggattgtagctctgtgtcatttt
cgcaggccagatgtgtctgtgcagggagaggaagtaactgtgtacactcctgaggaacgt
gatcctgtccccttgagtatccaccacatgcccatttgtgtcagttttgccttcttccat
caaggaacctttttattggtggatccaactgaacgtgaggagcgggtgatggatgggctc
cttgtaattgccatgaataaacacgatgaaatttgtaccatccagtccagtggagtggtc
atgctgctgcaggatcagattctgagatgcagtaaaataacagctgttaaggttgcagaa
ataacagaactgattcagaaagccttggaaaacgaccaaaaagccaggaaagaaggcggg
aagttcggctttgcggaatccatccccaaccaaaggatcactgccttcagaatggagagt
gctgctgtggacaccaacgacgtggaagagcaggctggagaaatcattgctaaagctgac
cctccttcagaagtttttgccaatccagtattgcacactcctgggacagcccaaattggg
gaaggaatagagagctcctggggagaccttgaagaatctgagaaggaagaagcagcagaa
gaagaaggtgaaagtgaggcagctgcttttgaatgtgagaaagtggaaactgaggataca
agtacagtgagggaaactaagagtgatgaacccattgtactgtctgacagtgaggaggaa
gaagttgtcattctggaaccacaggagctgccaaggaaaacaagaacacagaccagctcc
aaacaagaaaatccaagtaagaaagcatttaacaaaaggagaagaaagaagagaacttct
cgttaa
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