Cinclus cinclus (white-throated dipper): 134044840
Help
Entry
134044840 CDS
T10813
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog isoform X1
KO
K15176
RNA polymerase-associated protein CTR9
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccic03021
]
134044840 (CTR9)
Transcription machinery [BR:
ccic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
134044840 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
ARM_TT21_5th
TPR_Slam
TPR_9
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
134044840
NCBI-ProteinID:
XP_062350257
LinkDB
All DBs
Position
6:complement(10802277..10822523)
Genome browser
AA seq
1168 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGEVEGTKE
KKRGGGGGRRSKKGAGEFDEFVNDDSDEDLPISRKKKKRKGSGSEQDGEEEEGERKKKKR
RRPQKAEEGSDDEEHENGPRPKKRRPPKAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADDGHARNSNSDSEDGEQQHSKRIVSDSDSDNRNKSGSEAGTPRRSSARASE
EESDSDRSPRKRRRSESEQSDNESVQSGRSRGSGGSENESRPASRSAESDRDSERGSDHE
GSARASGNESEPEASNDEGSEGGSDDSD
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggctccatcgagatccctctccgggacaccgacgaggttatcgagcttgac
ttcgatcagttgcctgaaggtgatgaagttataagtatactgaaacaggaacacacccag
ctgcacatatggattgccctagcgctggaatactacaagcaaggcaaaacagaggacttt
gtgaagctgctggaagctgcccgcatcgatggcaacctggactacagggaccacgagaaa
gatcagatgacatgtctggacactctggcagcctactatgtccagcaggctcggaaggag
aagaacaaagacaacaagaaggagctcatcacccaggccaccctgctgtacactatggct
gacaaaatcatcatgtatgaccagaatcacttgttgggaagagcctgcttttgcctgctt
gaaggtgataagatggaccaagctgatgcacagttccactttgtgctcaaccagtctcca
aataatattcctgcacttctcggtaaggcatgcatttctttcaacaagaaggattataga
ggagcccttgcctactacaagaaagcactgcgtaccaatccgggctgcccagccgaggtt
cggttgggaatgggccactgcttcgtgaaactgaacaagctggaaaaagctcgcttggcc
ttcagcagggctctggagctgaattccaagtgtgtgggggccttggttggactggctgtt
ctggaactcaataataaggaggctgattccatcaagaatggtgttcaactcctctctagg
gcttacacaattgatcccagtaatccaatggtgttgaatcatttggctaatcacttcttt
ttcaagaaggactatggtaaagtacaacacttggctcttcatgctttccataacacagaa
gtggaagcaatgcaggcagagagctgttaccagctggcgaggtcttttcacgtgcaggaa
gattatgatcaagctttccagtattattaccaggccactcagtttgcctcatcttctttc
gtacttccgttttttggattgggtcaaatgtacatttatcgaggggacaaagagaatgct
tcacaatgctttgaaaaagtcttgaaagcctatcctaacaattatgagactatgaaaatc
cttggatctctttatgcagcttcagaagaccaggagaaacgggatattgcaaaggggcat
ttaaagaaagtcacagaacagtatcctgatgatgtagaggcatggattgagctagcccaa
attctagaacagactgatatacagggtgccctgtcagcctatggaacagccacacgcatt
ctgcaggagaaagtacaggctgatgtccctccagagatcctgaataatgtgggtgccctg
cacttcaggctgggaaacctgggagaagcaaagaaatacttcttggcgtcgctggatcgt
gcgaaagcagaggctgagcatgatgagcattactacaatgccatctctgtgacaacatcc
tacaaccttgccaggctctacgaggccatgtgtgaatttcacgaagcagaaaagctctat
aaaaacattttgagagaacatccaaattacgttgattgctacttgcgcttgggagctatg
gccagggataaagggaatttttatgaggcttctgattggtttaaagaagcacttcaaata
aatcaggatcatccagatgcctggtctctgattggcaatcttcatttggctaaacaagag
tggggtccagggcagaagaaatttgaaagaatattgaagcagccctccacacaaaatgat
acttattccatgctggctcttggcaacgtctggttgcagactctccatcaacccacaaga
gacagagaaaaggagaaacgtcaccaagaccgtgcattagccatctacaagcaagtcctc
agaaatgacccaaagaatttgtatgctgctaatggcataggagctgtcttggcccataaa
ggatatttccgtgaagctcgtgatgtttttgcccaagtgagagaggccacagcagatatc
agcgatgtgtggctgaatttggcacatatctatgtggagcagaaacagtacatcagtgct
gtgcagatgtatgaaaactgcctcagaaagttctataagcatcaaaacactgaagtgttg
ttatatttggcccgggcactgtttaaatgtggcaaattacaggaatgcaagcaaactttg
ttaaaggccaggcatgtggctccaagtgatacagtcctcatgtttaatgtagctttagta
ctgcaaaggcttgctacctctgtcctgaaagatgaaaaaagcaatctgaaggaagtgctt
aatgctgtgaaagaactggagcttgcccacaggtacttcagttacttgagtaaagtaggt
gataagatgagatttgacttggcacttgctgctacagaagccaggcaatgctctgactta
ctgagccaggcccagtatcacgtggctcgggcacgcaagcaggacgaggaggagagggag
ctgcgtgccaagcaggagcaggagaaggagctgcttcgccagaaactgcttaaagaacag
gaagagaagcgcctgagagaaaaagaagagcagaagaaacttctggaacaaagggctcaa
tatgtggagaagaccaagaatattctgatgttcactggtgaagtagaaggaacaaaggag
aaaaagcgtggtggtggtggaggcaggcgttccaagaaaggagcaggggagtttgatgag
tttgtcaatgatgacagtgatgaagatctgcccatctccagaaagaaaaagaagaggaag
ggcagtggcagtgaacaggatggggaagaagaggagggtgagagaaagaagaagaagagg
agaagaccccagaaggcagaagaggggagtgatgatgaagaacacgaaaacggcccacgg
cctaaaaagcgacgtccacccaaagcagagaagaagaaggctcccaaaccagagcgtctg
cctccttcaatgaaaggaaagatcaaatcaaaagccatcatttcatccagtgatgattct
tctgatgaggacaaactcaaaattgctgatgatgggcacgctagaaatagcaacagtgat
tctgaggacggggagcagcagcacagcaaacgcatcgtttccgatagcgattccgataac
aggaacaagtctggcagcgaggcaggcactccccgcaggtccagcgcccgcgcatccgag
gaggagtctgacagtgacaggtccccgaggaagaggcggcgctcggagtcggagcagtcg
gacaatgagtccgtgcagtcggggaggagccgcggctccggcggctccgagaacgaatcg
cgcccggcttcgcgcagcgccgagtccgacagagactccgagagaggctctgaccacgag
ggctcggccagagcttctgggaacgagtctgaaccagaggcgtccaatgatgagggctct
gaagggggctcagatgacagcgattag
DBGET
integrated database retrieval system
