Cinclus cinclus (white-throated dipper): 134045082
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Entry
134045082 CDS
T10813
Symbol
ABCB1
Name
(RefSeq) ATP-dependent translocase ABCB1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
134045082 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccic02000
]
134045082 (ABCB1)
04147 Exosome [BR:
ccic04147
]
134045082 (ABCB1)
04090 CD molecules [BR:
ccic04090
]
134045082 (ABCB1)
Enzymes [BR:
ccic01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
134045082 (ABCB1)
Transporters [BR:
ccic02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
134045082 (ABCB1)
Exosome [BR:
ccic04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134045082 (ABCB1)
CD molecules [BR:
ccic04090
]
Proteins
134045082 (ABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Rad17
RsgA_GTPase
AAA_5
Zeta_toxin
AAA_15
AAA_28
AAA_29
G-alpha
AAA_30
AAA_14
nSTAND1
AAA_19
Motif
Other DBs
NCBI-GeneID:
134045082
NCBI-ProteinID:
XP_062350659
LinkDB
All DBs
Position
1:complement(20946417..20981293)
Genome browser
AA seq
1293 aa
AA seq
DB search
MHSEDENKYTADGNSHEIAASSQDDEDKHKAKKKQKKGEKPKMVSPFTLFRYSSRSDKLL
MILGTLLAVAHGSSLPIAMIIFGDMTDSFVASGDRNFTENIPLNFTPDILNKLEEDMTRY
AYYYSGIAAGVLLAAYIQTSFWTLAAGRQIKKIREHFFHAIMRQEIGWFDVNDVGELNTR
LLDDVSKINEGIGDKVGLLVQSLTTFVAGFIVGLIRGWKLTLVILAVSPVLGLSAALWAK
VLSAFTDKEQAAYAKAGAVAEEVLGAIRTVIAFGGQEKEIKRYHKNLEDAKRIGIRKAIT
ANISMGAAFLLIYASYALAFWYGTTLILNDDYTIGKVLTVFFSVLIGAFSIGQTAPSIEA
FASARGAAYTIFNIIDNEPQIDSYSEAGYKPDHIKGNLEFKNVYFNYPSRPDVEILKGLN
LKINSGQTVALVGGSGCGKSTTVQLIQRFYDPKEGTVTIDGQDIKTLNVRYLREVIGVVN
QEPVLFATSIAENIRYGREDVTMEEIEKATKEANAYDFIMKLPNKFETVVGERGAQLSGG
QKQRIAIARALVRNPKILLLDEATSALDTESESVVQAALDKAREGRTTVVVAHRLSTVRN
ADLIAVFEGGVITEQGNHAKLLERKGIYYKLVNMQAIEAEVPSSENYEYVLPSSENYENV
SSVKNRESEPEFEESLTIGLRRRSTRRSMKKPGEQNDRTDEEKTSPDEELPPASFLKIMK
LNKTEWPYFVAGLLCAIINGALQPAFAIIFSEIIGIFSESDKVILRKQSNLYSLLFLVLG
IISFFTFFLQGYTFGKAGEILTMRLRFMAFKAMLRQDMGWFDNPKNTTGALTTRLANDAS
QVKGATGVRLALIAQNIANLGTGIIISLIYGWQLTLLLLAVVPIIAVAGMIEMKMLAGHA
KKDKQELETAGKIATQAIENIRTVVSLTRERKFESMYGEHLIVPYRNSVKKAHVFGFCFA
LSQAMMFFTYAGCFRFGAYLVVNGHMEYKNVFLVFSAVVFGAMALGQTSSFAPDYAKAKI
SAAHLFLLFERVPSIDSYSEEGDKPETFEGNITIKDVVFNYPNRPEVKILQGLNLKVEKG
QTLALVGSSGCGKSTVVQLLERFYDPLDGEMLFDGKNAKALNIQWLRAHIGIVSQEPILF
DFTIAENIAYGDNSRQVSFEEIVSAAKEANIHSFIDSLPDKYNTRVGDKGTQLSGGQKQR
IAIARALVRKPQILLLDEATSALDTESEKIVQEALDKAREGRTCIVIAHRLSTIQNADKI
AVVQNGRVVEQGTHQQLLAEKGIYYSLVNVQSG
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgcattctgaagatgaaaataagtatactgcagatggaaatagtcatgagatcgctgca
tccagccaggatgatgaagacaaacacaaggcaaagaagaagcagaagaaaggggaaaaa
cctaagatggtcagcccatttacactgtttcgatactccagccggtcagataaattatta
atgatactaggcactctgctggcagtagcccatgggagcagtcttcctattgcgatgata
atttttggtgatatgactgatagttttgttgcttctggagacagaaattttacagaaaac
ataccactgaatttcactccagacattcttaacaagctggaagaagatatgacaagatat
gcatactactattctggaatagcagctggtgttcttcttgctgcttacattcaaacttca
ttctggaccttagcagcaggtcggcaaataaaaaaaattagggaacatttttttcatgca
attatgagacaggaaattggatggtttgatgtgaatgacgtgggagaacttaatactcgt
cttttagatgatgtctccaagattaatgaaggaataggtgacaaggttggattgcttgtt
caatcgctgacaacatttgtggcaggatttatcgtcggtctcataagaggatggaaatta
acccttgtaatactagcagttagtcctgtcctgggactttcagcagccctctgggcaaag
gttctctctgctttcactgacaaagaacaagctgcatatgcaaaagcaggtgctgttgca
gaagaagttctgggagcaatccgcactgtaatagcttttggaggacaggaaaaagaaatt
aaaagatatcataaaaatttagaagatgctaaacggattggaataagaaaggctattaca
gctaatatttctatgggtgctgctttcttactgatatatgcatcatatgcactggcattc
tggtatggaactaccttgatcttaaatgatgattacactattggcaaagttcttacggtc
tttttctctgtattgattggagctttcagtattggacagactgctccaagcatagaggca
tttgctagtgcaagaggagctgcctataccatctttaatataatagacaatgaacctcaa
attgacagctattcagaggctggttacaaaccagaccacataaaagggaacttggaattc
aaaaatgtttacttcaattacccatccagaccagatgttgagatactgaagggcttgaat
ctcaagattaattctggccagacagtggccctggttggtggcagtggctgtgggaaaagt
acaactgttcagctcatccagagattttatgatcccaaagaaggcacggttaccattgat
gggcaggatattaagaccttaaacgtgaggtatctgcgggaagtcattggtgtggtgaat
caggagcccgtgctctttgccacttctattgcagaaaatattcgttatggccgtgaggac
gtcaccatggaggagattgaaaaagccactaaggaggcaaatgcttatgacttcatcatg
aagctacccaataagtttgaaactgtggttggagaaagaggggcacagctcagtggaggc
cagaagcaaagaatagcaattgcccgagctctggttcgcaatcctaaaattcttctgctt
gatgaggcaacatcagctttggatactgagagtgaatcagttgtgcaggcagcactggac
aaggcaagggaaggacgcaccacggtcgtggtagctcatcggctgtcaacggtgcggaac
gcagatctgatagctgtgttcgaaggtggagtcatcacagagcaagggaaccatgccaaa
ttgcttgagagaaagggaatctactacaaactcgttaacatgcaggcaatagaagctgaa
gttccatcatcagaaaattatgagtatgtacttccatcatcagaaaattatgaaaatgta
agtagtgtcaaaaaccgtgaatctgaaccagaatttgaagaatccttaaccataggattg
agaagacgatcaacacggagaagcatgaaaaagccaggagaacaaaatgacagaactgat
gaggaaaaaacttcacctgatgaagaactgcctccggcttcatttctgaaaattatgaag
ttgaacaaaactgaatggccatactttgtagctggactcttgtgtgcaattattaatgga
gctttacaacctgcatttgcaatcatattttctgaaattatagggattttttcagagtct
gacaaggtcatcttaagaaaacagagcaacttgtattcactgctgtttttagtacttggg
atcatttccttttttactttctttttgcagggttacacatttggcaaagctggagaaatt
cttacaatgaggcttcgattcatggcatttaaagcaatgcttagacaggatatgggctgg
tttgataatcctaaaaatacaactggagcgttaactacaagacttgctaatgatgcctct
caagtgaaaggagcaactggtgtcagactagcattaattgcccaaaacatagccaacctg
gggactggaattattatatcattaatttatggctggcagctgaccctgctacttttagct
gttgtgcccatcattgcagtggcaggaatgattgaaatgaagatgttggctgggcatgct
aagaaagataaacaagagctggaaactgcaggaaagattgccacacaagcaatagaaaat
attagaactgtggttagcttgacccgagaaagaaaattcgagtcgatgtatggagaacat
ttgattgtaccatacagaaactctgtgaagaaggcacatgtatttggcttttgttttgcc
ctttcacaagcaatgatgttctttacctatgctggctgtttccggtttggtgcctaccta
gtggtaaatggacacatggagtataaaaatgtatttttagtgttttcagctgttgtattt
ggtgcaatggcactaggacaaaccagttcttttgctccagactatgccaaagccaagata
tcagcagctcacttgtttctgctgtttgaaagagtgccctcaatagacagttacagtgag
gaaggagacaagcctgaaacatttgagggaaatataacaatcaaagatgtggtatttaac
tatccgaaccgaccagaggtcaaaatcctccaaggtttgaatctaaaagtagaaaaggga
caaactctggctcttgttggcagcagtggctgtggaaagagcaccgttgttcagctgctg
gagagattttatgacccacttgatggagaaatgctttttgatggcaaaaatgcaaaggca
ctgaatatccagtggttgagagctcatattggtattgtctcacaagaaccaatcctgttt
gacttcactattgctgaaaacatcgcctatggagataacagtcggcaggtgtcctttgag
gaaattgttagtgcagccaaagaagccaatattcattccttcattgactcactgccagat
aaatacaatacccgtgtaggagacaagggaacccagctttctggaggccagaaacaacgt
attgctattgcccgagctcttgtacgcaaaccccaaattctgcttctggatgaagctact
tctgccttagacacagaaagtgaaaagattgtccaggaagcgctggataaagctcgagaa
ggtcgcacgtgcatcgtgatagctcatcgcctctccaccatccaaaatgctgacaagatc
gctgtggtccagaatggcagggtcgtagagcagggcacccatcagcagctcctggctgaa
aaaggcatctactattccctggtcaatgttcaaagtgggtaa
DBGET
integrated database retrieval system