Cinclus cinclus (white-throated dipper): 134045181
Help
Entry
134045181 CDS
T10813
Symbol
FEN1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03030
DNA replication
ccic03410
Base excision repair
ccic03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
134045181 (FEN1)
03410 Base excision repair
134045181 (FEN1)
03450 Non-homologous end-joining
134045181 (FEN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccic03032
]
134045181 (FEN1)
03400 DNA repair and recombination proteins [BR:
ccic03400
]
134045181 (FEN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccic04147
]
134045181 (FEN1)
DNA replication proteins [BR:
ccic03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
134045181 (FEN1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
134045181 (FEN1)
DNA repair and recombination proteins [BR:
ccic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
134045181 (FEN1)
Exosome [BR:
ccic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134045181 (FEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
5_3_exonuc_N
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
134045181
NCBI-ProteinID:
XP_062350799
LinkDB
All DBs
Position
6:9568169..9571199
Genome browser
AA seq
386 aa
AA seq
DB search
MGIHGLAKLIADVAPGAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGADVLQNEDGET
TSHLMGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELAKRTERRAEAEKHLQEAQEAGEE
ENIEKYSKRLVKVTPQHTEECKKLLTLMGIPYVEAPGEAEASCATLVKAGKVYAAATEDM
DCLTFGSPVLMRHLTASENKKLPIQEFHLNRILQDLQLTWEQFVDLCILLGCDYCGSIRG
IGPKRAVELIREHKSIERIVQQLDTKKYPLPENWLHREAQKLFLEPDVIDPEAVELKWSE
PDEEQLVQFMCGEKQFNEERIRNGVRRLSKSRQGSTQGRLDDFFKVTGSITSAKRKEPEP
KGAAKKKAKTNSKPSGGTATKTKKTK
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgggaatccatggcttggccaagcttattgccgacgtggctcccggggccatccgggag
aacgacatcaagtcctactttggccggaaagtggccatcgacgcctccatgagtatctac
cagttcctgatcgccgtgcggcagggagctgatgtgctccagaatgaggacggggagacc
accagccacctcatgggaatgttctaccgcaccatccgcatggtggagaacggcatcaag
ccagtgtacgtgttcgacgggaagcccccgcagctgaaatccggggagctggccaagcgc
acggagcgccgggccgaggcagagaagcacctgcaggaagctcaggaggctggggaggag
gagaacattgagaagtacagcaagaggctggtcaaggtgaccccgcagcacactgaggag
tgcaagaagctgctgacgttgatgggcattccctacgtggaggcacccggagaggcagag
gccagctgtgctaccctggtgaaggctgggaaggtgtacgccgccgccacggaggacatg
gattgcctcaccttcggcagccccgtgctgatgcggcacctcacagccagcgagaacaag
aaactgcccatacaggagttccacctgaaccggatcctgcaggatctgcagctgacctgg
gagcagtttgtggacctgtgcatcctgctgggctgcgactactgtggcagcatccgtggc
atcgggccaaagcgcgccgtggagctcatccgggagcacaaatccattgagaggatcgtg
cagcagctcgacaccaagaagtaccccctgcccgagaactggctgcacagggaggcccag
aagcttttcctggagcccgacgtgatcgatcctgaggccgtggagctgaagtggagcgag
ccggacgaggagcagctggtgcagttcatgtgtggggagaagcagttcaacgaggagcgc
atccgcaatggcgtcaggaggctgagcaagagccgccagggaagcacccaggggcggctc
gacgacttcttcaaggtcaccggatccatcacctcggccaagcgcaaggagccggagccc
aagggagcggccaagaagaaagccaagaccaactccaagcccagtggcggcacggccaca
aagactaaaaagacaaaataa
DBGET
integrated database retrieval system
