Cinclus cinclus (white-throated dipper): 134045185
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Entry
134045185 CDS
T10813
Symbol
PALS1
Name
(RefSeq) protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
134045185 (PALS1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccic04990
]
134045185 (PALS1)
Domain-containing proteins not elsewhere classified [BR:
ccic04990
]
PDZ domain-containing proteins
MAGUK family proteins
134045185 (PALS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
L27
PDZ_6
SH3_1
PDZ_2
SH3_9
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
134045185
NCBI-ProteinID:
XP_062350806
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All DBs
Position
6:complement(30176110..30202473)
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AA seq
675 aa
AA seq
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MTTSHMNGHITEDSDNEAKNVDLVSSEDPQKHREMAVDCPGDLGSRMMPMRRSAQLERIR
QQQEDIRRRREEEGRKQELDLTASMRLKKLAQIPPKTGIDNPIFDTEEGIVLESPHYAVK
TLEVEELLNSLKHIQHILVDPQSQEDISLILQLVQNSDFQNAFKIHNAVTVHMNKASPPY
PLSSNAQELAQEVQSVLKPSHHKDGQELNALLNAPHMQALLLAHDKVAEQEMQPEPMADE
KIYENVGMYGGETVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDE
VLEINGIEIRGKDVNEVFDLLADMHGTLTFVLIPSQQSKPPPAKETVIHVKAHFDYDPSD
DPYVPCRELGLSFQKGDILHVISQEDPNWWQAYRDGDEDNQPLAGLIPGKSFQQQREAMK
QTIEEDKEPEKSGKLWCAKKNKKKRKKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKR
PIVLIGPQNCGQNELRQRLMNNEVDRFASAVPHTTRNRRETEAAGRDYHFVSRQAFESDI
AAGKFIEYGEFEKNLYGTSIDSVRQVINSGKICLLNLHTQSLKTLRNSDLKPYIIFVAPP
SQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRLIN
KLDTEPQWVPSTWLR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgactacttctcatatgaatggacatatcacagaagattctgacaatgaagcaaaaaat
gtggatcttgtgtcttctgaggaccctcagaagcacagagaaatggctgttgactgccct
ggggacttgggctccaggatgatgcccatgcggcgcagcgctcaactagagcgaatccgt
cagcagcaggaggacatcaggcgcagacgagaagaagagggaaggaaacaagaactggac
cttactgcttctatgaggttaaagaaactagcacaaattcctcctaaaactggaatagat
aatccaatatttgacacagaagaaggaattgttttggagagtcctcattacgctgtgaaa
acactagaagtggaagaactgttaaattcccttaagcatatccagcacattttggtagac
ccccagagtcaagaggatatctcgctcattttacagcttgttcaaaatagtgattttcag
aatgcatttaagatccacaacgctgttacagtgcacatgaacaaagccagccctccgtat
cctctcagctctaatgcacaagaactagcacaagaggtacagagtgttttgaaacccagc
caccacaaggatggacaggagcttaatgctttgctgaatgcccctcacatgcaggcactt
ctactggctcatgataaggttgcagaacaagaaatgcaaccagagcctatggcagatgaa
aagatttatgagaatgttggcatgtatggaggggagacggtaaaaatagttcgcattgag
aaagctcgggatattccgttgggtgctactgttcgcaatgaaatggattctgttatcatc
agtcgaatagtcaaaggaggtgctgcagagaagagtgggttattacatgaaggggatgaa
gttctggagatcaatggcattgagatccgtggaaaagatgttaatgaagtttttgacttg
ctggctgacatgcatggtactctcaccttcgtattgattcccagtcagcagagcaagcca
cctcctgcaaaggagacagttatacacgtgaaagctcattttgactacgatccctctgat
gacccttacgtcccctgccgagagttaggcctgtcttttcaaaaaggagacatactccat
gtgatcagtcaagaagatccaaactggtggcaggcttacagagatggagatgaagataac
cagccactggcaggacttatccctggaaaaagttttcagcaacaaagagaagcaatgaag
caaaccatagaagaagacaaggagcctgaaaaatcaggaaagctctggtgcgcgaagaaa
aacaaaaagaaacggaaaaaagttttatacaacgcaaataaaaacgatgattatgacaac
gaggaaattctgacctacgaggagatgtcactgtaccatcagccagcaaacaggaaacgt
cccattgttctgattggcccgcagaactgcggccagaacgagctgcggcagaggctgatg
aataatgaagtggatcgctttgcctccgccgtgccccatactactcggaataggcgagag
actgaggcagcgggcagggattatcatttcgtgtcccgacaggcatttgagagtgacata
gctgcagggaagttcattgaatatggagagtttgaaaagaacctctacggtacgagcata
gactccgtgcggcaggtcatcaactcgggcaagatatgccttttaaatcttcatacccag
tcactgaaaacactacgtaactctgacttgaagccgtatattatattcgttgcgccacct
tcacaagagcgactacgtgctctattggccaaagaagggaaaaatcctaagccagaagag
ctgagagaaatcatagagaagacaagggagatggaacagaacaatggccactactttgat
acagcaattgtgaattctgatcttgataaggcgtatcaagagttacttcggttaataaat
aagctcgacacagaaccccagtgggtgccctccacctggctacgatga
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