| Entry |
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| Symbol |
PNN
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| Name |
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| KO |
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| Organism |
ccic Cinclus cinclus (white-throated dipper)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ccic00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134045331 (PNN)
03015 mRNA surveillance pathway
134045331 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ccic03019]
134045331 (PNN)
03041 Spliceosome [BR:ccic03041]
134045331 (PNN)
Messenger RNA biogenesis [BR:ccic03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
134045331 (PNN)
Spliceosome [BR:ccic03041]
Complex C
Other components
EJC/TREX
134045331 (PNN)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
6:39229711..39239534
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| AA seq |
695 aa
MAVAVRALQEQLEKAKESLKHVDENIRKLTGRDPNDVRPPQNRLLALTGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGASSRLGGERRTRRESRQESDAEDDDIKKPALPSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVAIATERQKRRQEIEQKLE
VQAEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTK
PHLFYIPGRMCPATQKLMEESQKKMNALFESRRNEFAEQINKMEARPRRQSMKEKEHQEV
QNEEKKEEQNKEQEEGKVAQQVEEMETGNQHNDVEMEEVGEEKGKIGSGSGHSDAEKEQE
EDEQRHDVEMKVEEPTEVRENDKQQDGQHEEVTVVKEESENIQPVDNEQDVAEMHEADSV
EPVENENSKEIEPETECDAQAEKVCNVPSPQKEKGIKTENKAELEETQEKTSEAQTESVA
EALSQPQSVPLEQSPQLSQSTQDTEPQTDKDENAVVSVKVVEAQAEQNQTLSAESKSKTR
SRSRGRAGNKTGHNRSSSSSSSSTSSSTTSASSSSTGSSTSRSSSTSSSTTSGSTSRDSS
SSSSSSSESRSRSRGRGHNRDRKRRRSTDRKRRDASGVDRSHKSSKGGGSRDTKSSKDKS
SRSDRKRSISESSRSGKRTSRSERDRKSDRKDKRR |
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| NT seq |
2088 nt +upstreamnt +downstreamnt
atggcggtagcggtgcgcgcgctgcaggagcagctggagaaagccaaggaaagtctcaag
cacgtagacgagaatatccgcaagctcacgggccgggaccccaatgatgtgaggccccct
caaaacaggcttttagccctcacaggccccggtggaggtagagggcgtggaagcttatta
ctaaggcgtggattctcggacagtggaggaggacccccagccaaacagagggatcttgaa
ggtgcatccagtaggctgggtggagaacgtcggacaagaagagaatcacgccaagaaagc
gacgcagaggatgatgatattaaaaagccagcgttgccatcttctgttgttgctacctcc
aaagagcgaacacgtcgagaccttatacaagatcaaaatatggatgagaaaggaaaacaa
aggaatcgacgtatatttggcttgttgatgggcactcttcagaaatttaaacaggagtcc
acagttgctattgctactgagaggcaaaagagacgacaagaaattgaacaaaaacttgaa
gtgcaagcagaggaagagagaaagcaagttgaaaatgagaggcgagaactgtttgaggaa
agacgtgctaaacagacagagctgcggttattggagcaaaaggttgagcttgctcagttg
caagaagaatggaatgaacacaatgctaagataattaagtacataagaacaaagacaaaa
cctcatttattctacatacctggcagaatgtgtcctgctacgcagaagctgatggaagag
tcacagaaaaagatgaatgcactctttgaaagcaggagaaatgaatttgcagagcagatt
aacaaaatggaggccaggcccagaagacaatctatgaaggaaaaagaacatcaggaggtg
cagaatgaagaaaagaaggaagaacagaacaaggagcaggaagagggtaaggtggctcag
caggtggaagagatggagacaggtaatcagcacaatgatgtagaaatggaagaggtaggg
gaggaaaagggaaaaataggttcaggttcagggcatagcgatgcagaaaaagaacaggaa
gaggatgagcagagacatgatgtggaaatgaaagtagaagagcctactgaggtgagggag
aatgacaagcaacaggatggtcagcatgaggaggtcacagttgtaaaagaggaaagtgaa
aacattcagccagtggataatgagcaggatgtggctgaaatgcatgaggcagatagtgta
gaacctgtagaaaatgaaaatagcaaagaaatagaaccagaaacagagtgtgatgctcag
gcagaaaaagtgtgtaatgtgccttctccccagaaggagaaaggtatcaaaacagaaaat
aaagctgaacttgaagaaacacaggagaaaacatctgaagctcagacagaatcagtggct
gaggctctatctcagccacagtctgtgccactagaacagtcacctcagttgtctcagtcc
actcaggatacagagccccagacagacaaggatgaaaatgctgtggtgtctgtaaaggtg
gtagaagcccaggcagagcagaaccagacattgagtgcagaaagtaagagtaagactagg
agtagaagcaggggtagggcagggaacaaaactggtcataaccgtagcagcagcagtagt
agcagtagcacttcaagcagtactaccagtgcgagtagttccagtactggcagcagtacc
agtcggagcagttccaccagcagcagcactacaagtgggagtacgagcagggacagcagc
agcagtagctctagcagcagtgaaagcagaagtcgaagccgaggcagagggcataacagg
gatagaaaacgcagaaggagcacggacaggaagcgaagggatgcttcgggggtagataga
agtcacaagtcctcaaaaggtggtggcagtagagataccaaaagctcaaaggataaaagt
tcgaggtctgacagaaagagatctatatcagaaagtagtcggtcaggcaagagaacttca
cggagtgaaagagaccgtaaatcagacaggaaagacaaaaggcgttaa |
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