Cinclus cinclus (white-throated dipper): 134045339
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Entry
134045339 CDS
T10813
Symbol
LRR1
Name
(RefSeq) leucine-rich repeat protein 1 isoform X1
KO
K10348
LRR-repeat protein 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccic04121
]
134045339 (LRR1)
Ubiquitin system [BR:
ccic04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
134045339 (LRR1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_6
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
134045339
NCBI-ProteinID:
XP_062351052
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Position
6:complement(61056226..61063866)
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AA seq
441 aa
AA seq
DB search
MRLQCEVEVLSRLLPSCGLRGRGRAARALVSLGRPPGAAGAGIYLMVCTARDRGGARYKV
GTAAGGARRGCPGRPLSPLCPQVQQNVERLFTRFVEEGKATVRLREPAVDLCLSKANVIN
LKTFLSAVRLAHQGNDTGVLPLSPLVPAKNSDVEKPKTKMIITSRRDYPLTKSFPFSLEH
LQTSYCKLARIDSRVLCLKKLRKLDLSHNHIKQLPATLGDLAYLQELDLHDNHLEAFSGA
LCSSGLQKSLQLLDLSQNQIQALPIEFCQLRGLVQLRLDDNALLRLPCRIGQLSRLRFLS
AARNKLPFLPSDFRKLSLENLDLFGNPFEQPNPLVPNIQLKIPLTLLECAARATVNHRIP
YGCHLLPSHLCKDLEVAKTCQCGSSCLSSFIQITVTMNLHHVAHTVVLVDNMGGTEAPVL
CYFCSLDCYSQFLDRHLQSNG
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgcagtgcgaggtggaggtgctgagccggctcctgcccagctgcgggctgcgg
ggccgcggccgcgcggcccgggcgctggtgtcgctggggcggccgcccggcgctgccggt
gccggcatttacctgatggtgtgcacggcgcgggaccgcggcggggctcgctacaaggtg
gggacggcggcgggcggggcgcggcgggggtgccccgggcggccgctgagcccgctgtgc
ccgcaggtgcagcagaacgtggagcggctcttcacgcggttcgtggaggagggaaaggcc
acggtgcggctgagggagcccgcggtggatctgtgcctcagcaaggcaaatgtgatcaat
ttaaagactttcctttcagccgtgagactggctcaccaaggcaacgacaccggagttctc
cctctctcacctctggtcccagccaagaactccgacgtggagaaacccaaaaccaaaatg
atcatcacttccaggagggattaccccctcaccaagagcttccctttctccctggagcac
ctgcagacctcgtactgcaagctggccaggatcgacagcagggtgctgtgcctgaagaag
ctccgcaagctggacctgagccacaaccacatcaagcagctgccggccacgctgggggac
ctggcgtacctgcaggagctcgacctgcacgacaaccacctggaggctttcagcggggcg
ctgtgcagctcgggcctgcagaaatccctgcagctgctggacctgagccagaaccagatc
caggcgctgcccatcgagttctgccagctgcggggcctggtgcagctgcggctggacgac
aacgccctgctgcgcctgccctgcaggatcgggcagctgagccgcctgcgcttcctgtcg
gcagctcgcaacaagctgcccttcctgcccagtgacttcaggaaactctccctggagaac
ttggatctctttgggaatccttttgagcagcccaacccgctggttcccaacatccagctg
aaaatcccgttgacgctgttggagtgtgctgccagggccaccgtcaaccacagaatccct
tatggctgtcacctcctcccttcccacctgtgcaaggatctggaagtggccaagacgtgc
cagtgtgggagctcctgcctgagcagcttcatccagatcacggtgaccatgaacctgcac
cacgtggctcacaccgtggtgctcgtggacaacatggggggcacggaggctcccgtgctc
tgctacttctgctccctggactgctactcccagttcctggacaggcacctgcagagcaac
gggtga
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