Cinclus cinclus (white-throated dipper): 134045358
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Entry
134045358 CDS
T10813
Symbol
VTI1B
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
134045358 (VTI1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134045358 (VTI1B)
Membrane trafficking [BR:
ccic04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
134045358 (VTI1B)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
Laminin_II
WXG100
Snapin_Pallidin
Fusion_gly
DUF3958
KxDL
Motif
Other DBs
NCBI-GeneID:
134045358
NCBI-ProteinID:
XP_062351084
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All DBs
Position
6:complement(30062341..30073134)
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AA seq
231 aa
AA seq
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MAGRGSASSEHLERLHEIFRGLHGDLRGVPERLRGSAAEEKKKLVREFDEKQREANETLR
EMEEELKYAPVPFRNQMMSKIRAYRRDLSMFQREMRSTDLGLGRGNQGDIKYGIFATENE
QSTNLQSQRVLLLQGTDSLNRASESIERSHRIAAETDQIGTDIIEELGEQREQLERTKSR
LVNTSENLSKSRKILRAMSRRVTTNKLLLSIIIILELAILGGVVYYKFFRK
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccgcgggtccgcgtcctcggagcacctggagcggctgcacgagatcttccgc
gggctgcacggagacctgcggggcgtccccgagcggctgcggggcagcgcggccgaggaa
aagaaaaaactggttcgagaatttgatgagaagcagcgtgaagccaacgagacgctgcgg
gaaatggaggaagaactgaaatacgctcctgtgcctttccgcaaccaaatgatgagcaaa
atccgagcatacagaagagacctgtccatgttccagagagagatgagaagcacagatttg
ggattgggccgtggaaaccaaggcgatataaaatacggaatcttcgccacagaaaatgaa
cagagtactaacctgcagtcacagagggtgctgcttctccagggcacagacagtctgaac
agagccagtgagagcatcgagcgctcgcaccgaatcgctgctgaaaccgatcagattggc
acggatatcatcgaggaactcggggagcagcgggagcagctggaacgcaccaagagcagg
ttggtgaatacaagtgagaacttgagcaagagtcgcaagattctacgcgcgatgtcccgg
agagtaaccacgaataagttgttactgtcaattatcatcatcctggaactggccatccta
ggaggcgtggtctactacaaattctttcgcaagtga
DBGET
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