Cinclus cinclus (white-throated dipper): 134045416
Help
Entry
134045416 CDS
T10813
Symbol
CPSF7
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03015
mRNA surveillance pathway
ccic03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134045416 (CPSF7)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
134045416 (CPSF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccic03019
]
134045416 (CPSF7)
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
134045416 (CPSF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
RRM_7
UCMA
Motif
Other DBs
NCBI-GeneID:
134045416
NCBI-ProteinID:
XP_062351172
LinkDB
All DBs
Position
6:complement(9393353..9400555)
Genome browser
AA seq
476 aa
AA seq
DB search
METGSEAPKGRNHHGERNSYELRERLREASSGYWDPEFSNADQMDLYDDVLAASSQPQEK
RSSSSEAPPEIRQEPSPKPNSKPPAILYTYSGLRNKRAAVYVGSFSWWTTDQQLIQTIRS
VGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLELLPGKILNGDKVEVRLATRQN
LSQFEAQARKRVPPRAHSRDSVDAVDGRATPTENALPPTRIEKPPSVLPFFSRPPALPLM
GLPPPPMPPPPPLSSAFGVPPPPPGIPYQHLLPPPPRLPPPLAVPPPGAVPPALHLNPAF
FPPPTAALGPPPDTYGKAMAPYNHSSRELGPPIPAMSEGEFEEIMNRNRAISSSAISKAV
SGASAGDYSNAIETLLTAIAVIKQSRVASDERCRVLLSSLKDCLHGIEAKSYSSSSSSSS
RKRHRSRERSPSRSRESSRRHRDLLHSDDRHEDYFQERSREHERHRDRDRDRDRHH
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggaaactggaagtgaagcacccaaaggaaggaatcaccatggagaaaggaattcttat
gagctccgggagcgattgagagaagcttcttctggttattgggacccggagtttagtaat
gctgaccagatggatctctacgacgacgtgttagcagccagctcccagccccaggaaaag
cgttccagcagctcggaagcgcctccagagatccgtcaggagccgtctcccaagcccaac
agcaaacccccagccatcctgtacacctacagtgggctccggaacaagagggccgccgtc
tatgtcgggagcttctcctggtggacaactgaccagcagctgatccagaccatccgctcc
gtcggagtctacgacgtggtggagctgaaattcgcggagaaccgagccaatggccaatcc
aaggggtatgcggaggtggtggtcgcctctgagaactcggtccataaactcctggagctg
cttcctggaaaaatcctgaatggagacaaggtggaggtgaggctggcgacccggcagaac
ctgtcgcagttcgaggctcaggctcgcaaacgtgtgccaccgcgggctcactcccgggat
tccgtggatgccgtggacggccgggcgacgccgacggagaacgcgctgccccccacccgc
atagagaagcccccctcggtcctgcccttcttcagccgaccccctgcactgcccctcatg
gggctgcccccacctcccatgccccccccgcctcccctctcctccgctttcggagtccct
ccgccacctcccggaattccctaccagcacctgctaccgcctccgccccggctgcccccg
cccctggccgtgcccccccctggggccgtgccccctgccctgcacctcaatcccgccttc
ttcccaccgcccaccgccgccctgggaccccctccagatacctacggcaaggccatggct
ccctacaaccacagcagccgggagctgggcccgcccatcccggccatgagcgaaggcgag
tttgaggagatcatgaaccgcaaccgcgccatctccagcagcgccatttccaaggcggtg
tccggcgccagtgcaggggattacagcaacgccatcgagacgctgctcacggccatcgct
gtcatcaagcagtcgcgcgtggccagcgacgagcggtgccgtgtcctcctctcttccctc
aaggattgcctgcatggaattgaggccaaatcctacagcagcagctccagcagcagctcc
aggaaaagacaccgatcccgggagcgctctcccagccggtcccgtgagagcagccggcgg
caccgggatctgctccacagtgacgatcggcacgaggattatttccaggagcggagccgg
gagcacgagcggcatcgggatagggacagagacagggaccggcaccactga
DBGET
integrated database retrieval system
