Cinclus cinclus (white-throated dipper): 134045516
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Entry
134045516 CDS
T10813
Symbol
AMBRA1
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1 isoform X1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04137
Mitophagy - animal
ccic04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134045516 (AMBRA1)
04137 Mitophagy - animal
134045516 (AMBRA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134045516 (AMBRA1)
03029 Mitochondrial biogenesis [BR:
ccic03029
]
134045516 (AMBRA1)
Membrane trafficking [BR:
ccic04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
134045516 (AMBRA1)
Mitochondrial biogenesis [BR:
ccic03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
134045516 (AMBRA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
eIF2A
WD40_MABP1-WDR62_2nd
PRIMA1
TAZ1_RBM
Motif
Other DBs
NCBI-GeneID:
134045516
NCBI-ProteinID:
XP_062351306
LinkDB
All DBs
Position
6:24184248..24317343
Genome browser
AA seq
1300 aa
AA seq
DB search
MKVVPEKNAVRILWGRERGTQALGAQRLLQELVEDKTRWMKWEGKKVELPDSPRSTFLLA
FSPDRTLMASTHVNHNIYITEVKTGKCVHSLVGHRRTPWCVTFHPTIPGLIASGCLDGEV
RIWDLHGGSESWFTDSNNAIASLAFHPTAQLLLIATANEIHFWDWSRREPFAVVKTASEM
ERVRLVRFDPLGHYLLTAIVNPSNQQSDEEVEISVDSTEMPHYRQRAILPSQPVRRTPLL
HNFLHMLSSRSSGIQVGEQNSVQDSATPSPPPPPPPPPPPPASENTRASVYNRLRERVSY
PTAECCQHLGMLCLCSRCSSARLPSSLFPHQENAPSTSSGATGTSFSSVQTEPYQPPEQA
SIAQEEQGILNRPSAFSTVQSSTAGNTLRNLSLGPTRRSLSGSLAGHQSRYQQSAREMAS
GLGGSDWSRTVLNMSSRSELEAMPPPRTSASSVSLLSVLRQQEGGSQASVYTSATEGRGF
LAPGAEVNSGSSAGPSNPASIRNELQCDLRRFFLEYDRLQELDQGIGGEPSQSQQAQEML
NNNIEPDRPGPSHQQTPQSSENNSNLSRGHLNRCRACHNLLTFNNDTLRWERSTPSYTPG
QVQSTFEGVPPNTSQVQPAERTEGRAPASSRLQLGSSSTPQEERTVGVVFNQETGHWERV
YSQSASSRPGNVSQEALNQEMPEESSEEDSLRRRLLESSLISLSRYDGAGSREHPIYPDP
ARLSPAAYYAQRMIQYLSRRDSIRQRSMRYQQNRLRSSSSSASTSDNSNPSVEGNDLEFE
DFEDNGDRSRHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGLATHSSVNR
VLAGAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVQNCKIYNDASCDI
SADGQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRYVM
VGLASRRILLHPTTEHMVAQVFRLQQPHGGETSMRRVFNVLYPMPADQRRHVSINSARWL
PEPGLGLAYGTNKGDLVICRPEALNSGVEYHWDQLNENVFTVHSSSRNTDRPGTSRATWR
TDRDMGLMNAIGLQPRNPPTSVTSQGTQTLAPQLQNAETQTEREVQEQESTSAGTGEGEG
PEYGASGEDALSRIQRLMAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRSSQTGAE
PTGTEGTSAQQSSSQQLGTELEGRIVSESVQLPEHGLSPRTAPSGSEGQSAGDLDLPEQA
QSSMDTEGPIEYSDLTNNNHLPDSTNFYSNDTTSGESRNR
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttgtcccagagaagaatgctgtccgcatcctgtggggtagggaacggggtacc
caagccttgggtgctcagcggcttctgcaggagctggtggaggataaaactcgatggatg
aaatgggaaggcaagaaagttgagttaccagacagtccacgctccaccttcttgctggcg
tttagtccagacaggaccctaatggcttccacacatgtgaaccacaacatctatatcaca
gaggtgaaaacgggcaagtgtgttcattccttggttggacatcgccgtactccctggtgt
gtcaccttccatcccaccatcccaggcctcattgcttcaggatgcctagatggggaggtt
agaatttgggatttacatggtggaagtgagagctggttcacagatagcaacaatgccatt
gcatcacttgcttttcatcctacggctcagctcttgttgattgccactgccaatgagata
catttctgggactggagtcgtcgggagccttttgctgtggtgaaaacagccagtgagatg
gaacgggtcaggctggtacggtttgatcccttgggacactacttgctcacagcgatagtt
aacccttctaaccagcagagcgatgaggaagtggaaatctccgtggacagcacagagatg
ccgcattatcgccagcgcgctatccttccgtctcagcctgtgaggcgcacgcctctcctg
cacaacttcctgcatatgttgtcctcccgctcctctggcatacaggtgggagagcaaaac
agtgttcaagactctgctaccccatcccctccaccgcctccaccaccaccacctccgcct
ccagccagtgagaacacaagggcatctgtctataacaggctccgggagcgagtcagctat
cccacagcagagtgctgccagcacctggggatgttgtgcctttgcagccgatgctctagt
gcaagacttccttcttctctcttcccacaccaggaaaatgcaccctccacgtcttctggg
gccactggcacttccttctcctctgtgcagacagagccttatcaacccccagagcaggca
tccatagcgcaggaggagcaggggatacttaacaggccctctgctttcagcacagttcag
agcagcactgctggcaacaccctgcgcaaccttagcctgggccccacacggcggtccctc
agcgggtccttggcaggccaccagtcgaggtaccaacagtctgcgagagagatggcttca
ggcttgggtgggtctgactggtccaggacagtgctgaacatgagctctcggtctgagctg
gaagccatgcctccccctaggaccagtgcctcctccgtgagcttgctgtccgtgctcaga
cagcaggagggaggttcccaggcatcagtctatacctctgcaacagaagggaggggcttt
ttggccccaggggctgaggtgaacagtggtagtagtgctggcccgagcaatccggccagc
attcgtaatgagctccagtgtgatttgaggcgattcttcctggaatatgaccggcttcag
gagttagatcaggggattggtggggagcccagccagtcgcaacaggctcaggaaatgctc
aacaacaacattgagcctgatcgaccgggtccctcccatcagcagactccacaaagcagt
gaaaacaattccaatttgtcccggggtcacctgaaccgctgtcgtgcttgtcataacctg
ctgacctttaacaatgacacgctgcgctgggaaagaagcacgcctagctacacaccaggg
caggtccaaagcacatttgagggtgtgcctccaaataccagccaggtgcagcctgcagag
agaaccgagggcagagctcctgcctctagcagactgcagctgggcagctcttccaccccg
caggaggagaggaccgtgggagtggtctttaaccaggagacggggcactgggaaagagtt
tacagccagtcggcttcaagcagacctgggaatgtatcacaggaggccttaaaccaggaa
atgcctgaggaaagctcagaggaggattcactcaggaggaggttgctggagtcttccctc
atttcattatctcgctatgatggagcaggatcccgggaacatccaatctacccagatcca
gccaggttgtctcctgctgcatattatgctcagaggatgatccagtatctttcccggagg
gacagtattcgacagcgctccatgcgatatcagcaaaaccgtctccgctcttcctcctcc
tctgcttccacttcagacaactcaaacccatctgtggagggaaatgatctggaatttgaa
gattttgaggacaatggagaccgatccaggcaccgagctccccggaatgcccgcatgtct
gcaccatcgctggggcgctttgtcccgagacgcttcttgctgccagagtacttgccttat
gctgggattttccatgaacggggacagcctggcttggccacccattcctctgtcaacagg
gtcttggcaggtgctgtgattggggatggacagtcagctgtggccagcaacattgccaac
accacctaccggctccagtggtgggacttcactaagtttgatctgcctgaaatcagcaat
gcctctgtgaatgtgcttgtccaaaactgcaagatttacaatgatgccagctgtgatatc
tctgcggatgggcagctgctggcagccttcattcccagcagtcagagaggcttccctgat
gaaggaatactggctgtatattctctggcacctcacaacttgggcgagatgctttacaca
aagcgatttggccctaatgccatttctgtgagcctgtctccaatgggcagatatgttatg
gtgggactggcttcccgacgcatcctgttgcaccccactacagaacacatggttgctcaa
gttttcaggctgcaacagccccatggtggagaaacctctatgaggagagttttcaacgtt
ctgtacccaatgcctgctgaccagagaagacatgtcagcataaactctgctcgctggctg
cctgagccgggcctgggattggcatatggcaccaacaaaggggacctggtgatttgccga
ccagaggccttaaactctggagttgagtaccactgggaccagctgaatgagaatgtcttc
actgtgcattccagcagcaggaatactgaccggcctggaaccagcagagctacatggagg
acagacagggacatgggcctgatgaatgccataggcctacaaccccgaaatccccccacc
tctgtgacgtcacagggtacccagaccttggcgcctcagctgcagaatgctgagactcag
acagagagggaggtacaggagcaagaatccacctctgcagggactggtgaaggtgaaggt
ccagaatatggggccagtggggaggatgctctgagcaggattcaaaggctgatggcagaa
ggtggcatgactgctgtggttcagcgggaacagagcaccaccatggcgtccatgggtggc
tttggcaacaacatcatcgtgagccaccggatccaccgcagctctcagactggtgcagag
cccactggaactgagggcacgtcagcacagcagtccagctctcagcagctgggcacagag
ctggagggacgcatcgtgtcagagtctgtgcagctgccggagcacggcctgagcccgcgg
acagcccctagcgggagtgaaggacaaagcgctggtgacctggacctgccagaacaggcc
cagtcctccatggacactgagggaccaattgaatacagtgacctaactaataataaccat
ctccctgacagtaccaacttctatagtaatgacaccaccagtggggagtcgcggaacagg
tag
DBGET
integrated database retrieval system
