Cinclus cinclus (white-throated dipper): 134045560
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Entry
134045560 CDS
T10813
Symbol
AQR
Name
(RefSeq) RNA helicase aquarius
KO
K12874
intron-binding protein aquarius
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134045560 (AQR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccic03041
]
134045560 (AQR)
Spliceosome [BR:
ccic03041
]
Complex B
Other components
Prp19-related factors
134045560 (AQR)
Complex C
134045560 (AQR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
UvrD-helicase
AAA_30
SLFN-g3_helicase
DEAD
UvrD_C_2
AAA_16
AAA
Parvo_NS1
Astro_capsid_p
AAA_22
PhoH
DnaB_C
nSTAND3
NB-ARC
DUF4088
Motif
Other DBs
NCBI-GeneID:
134045560
NCBI-ProteinID:
XP_062351365
LinkDB
All DBs
Position
6
Genome browser
AA seq
1468 aa
AA seq
DB search
MAAAAATAASSAPPKKIVAPTVSQINAEYVTQLANKYWAPHVKKTLSFDVKVIEDVYTKE
IVRSKFAIRKIMLLEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWETFK
KRPEHFPFFFKRILEALLVENESEYSLHEQTVLLLFLDHCFNSLEVDLIRGQVQQLISLP
MWMALQPNRLEQELKKTPKLRKFWNLIKKNDAKMDEESRMQAYRERRFLSQLIQKFISVL
KSIPVSGPISMDKVHYCERFIELMLDLEALLPTRRWFNTVLDDSHLVVHCYLSSLAKREK
EGHLFCQLLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFAL
SNVAAVDTRDALLKLFGPLSSNVLHQVASYLCLLPPLAEGQDTSHGKEFLLELLVSRHER
RISQIQQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLF
RLESTYEIRQDIEDSVSRMKPWLSEYGGVVFGGWARMAQPIVSFTVVEVAKPNIGENWPM
RVRADVTINLNVRDNIKDEWEGLRKHDVCFLITVRPMQPYGTKFDRRQPFVEQTGLVYVR
GCEIQGMLDEKGRVIEEGPEPKPRLKGDCRTYRVFLDPNQYQQDMTNTIQNGAEDVYETF
NIIMRRKPKENNFKALLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIATLD
FNDTFLSIDHLKASFPGYSVKVTVDNPDLHVPPFRITFPMKGGKGTKRKEDGSEENPEEA
KTLIVEPHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAV
QIISNLYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSR
YGRVNYVLARRLELLQEVGRLQESLGVPGDVSYTCETAGHFFLYQVMSRWEEYISKVKVK
GGKSPDVADVSRFFPFHQYFANAPQPVFKGKSYEEDMEIAEGCFRHIKKIFTQLEEFRAF
ELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRRDLVELGFKYDNILMEESAQILEIETFI
PLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLD
AQGRARASLCNLYNWRYKNLGNLPHVQLLPEFRTANAGFLYDFQLINVEDFNGVGESEPN
PYFYQNLGEAEYVVAVFMYMCLLGYPADRISILTTYNGQKHLIRDVINQRCGNNPLIGRP
NKVTTVDRFQGQQNDYILLSLVRTKAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCF
ELTPAFSQLTARPLHLHIIPTECFPTARQNGERPAHQIHVIKNMPQMANFVYNMYMHMIQ
STRHHQQHLLPPPAMIEEPEPTQTGETEVEGEGQGMQEDAAEENEVVEETMKEGELNVDE
MDEHRKMPEHPGRDSDSGDSEPENETEK
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgccgcggccactgcggcgtcctcggccccgccgaagaagatcgtggcgccc
acggtgtcgcagatcaacgcggagtacgtgacacagttagcaaataagtactgggctcca
catgtgaagaaaacattgtcttttgatgtaaaggtcattgaagatgtatatacaaaagaa
attgtcaggtcaaagtttgcgattagaaagatcatgcttcttgaattcagtcagtacctt
gaaaattacctgtggatgaattattctccagaggtgtccagtaaggcatatttaatgtca
atctgctgtatggtgaatgagaagttcagagagaatgtccctgcgtgggagacattcaaa
aaacggccagaacactttcctttctttttcaaacgcatactggaagcattgctggttgaa
aatgagagtgagtactctctgcatgaacagacagtcctgctacttttccttgatcactgc
ttcaatagtttggaggtggatttgatcagaggtcaggtgcagcagctcatttccttaccg
atgtggatggctctacaacctaatcgactggaacaagagttgaaaaagacaccaaaactg
agaaaattctggaatctaattaagaaaaatgatgcaaaaatggatgaagagtcaagaatg
caagcatatcgagagagaagatttctttcacagctcattcagaaattcatttctgttcta
aagtcaatacctgtctcaggtcctatttctatggacaaggttcattattgtgagaggttt
attgaactcatgctagaccttgaggctttgcttcccacacggcgctggtttaatacagtg
ctggatgactcccatcttgttgttcactgttacctgtctagtcttgctaaaagagagaaa
gagggtcatctcttctgccagcttttagatatgctcaaattctacactggctttgaaatc
aatgatcagactggaaatgctttgacggagaatgaaatgactacaattcactatgacaga
attacttctctacagagagcagcgtttgcacattttccagagttgtatgactttgcactc
tcaaatgtagctgccgtagatactcgtgatgcactgctgaagttatttggacctcttagc
tccaacgttctccaccaggtggcgtcgtacctgtgcctgctgccgccgctggccgagggg
caggacacgagccatgggaaggagtttctgctggaattgctggtttcccgtcatgaacgt
cgaatatctcaaattcagcaactgaaccagatgcctctctatcccacagagaagattatt
tgggatgaaaatattgtgccaactgaatattactctggagaaggctgtcttgcactcccc
aagttgaatctacaatttctgactctccatgactacctgctgaggaacttcaatcttttc
cgcttggaatccacctatgaaatcagacaggacatcgaagatagtgtcagtaggatgaaa
ccatggttatcagaatatggaggtgtggtctttggtggatgggctaggatggcacaaccc
attgtctctttcacagtggtggaggtggccaagcccaacatcggtgaaaactggcccatg
cgagtaagagcagatgttacaatcaatttgaatgtccgagataacatcaaagatgaatgg
gaaggtctgcgtaagcacgacgtctgcttcttgattacggtgcgtcccatgcaaccttat
ggcaccaagttcgacaggcgacagccttttgttgagcagactggcctggtgtatgttaga
ggctgtgaaattcagggcatgttggacgagaaaggacgtgttattgaagagggaccagaa
ccaaaaccaagacttaaaggtgattgcagaacatacagagtatttctggacccaaatcag
tatcagcaggacatgaccaatacaatccaaaatggagcagaagatgtctatgagacattt
aatataatcatgagaagaaaaccaaaagaaaacaatttcaaggcccttctggagactatt
aggaatttgatgaacacagattgtgtggttcccgactggctgcatgacatcattcttgga
tatggagacccaagtagtgcacactattcaaaaatgccaaatcagattgcaactctggat
tttaacgacacttttctgtccattgatcacttgaaagctagctttcctgggtacagtgtt
aaagtcactgttgacaatccagatctgcatgtgccccccttcaggataactttcccaatg
aagggaggtaaaggaacaaaaagaaaagaggatggaagtgaagaaaaccctgaagaagct
aaaacactgattgtagagcctcatgttattccaaacaggggtccatatccatataatcaa
ccaaaacgcaatactattcaatttactcatactcagattgaagccatccgtgcaggaatg
cagcctgggctaactatggtagtgggtccacctggtactggaaaaactgatgtagcagtc
cagataatatccaatctttatcataatttcccagaacaacgaactctaatagttacccac
tctaatcaggctttgaaccagctgttcgaaaaaatcatggctctggacattgatgagcgt
caccttctgcgtctgggtcacggagaagaggaattagagacagagaaagatttcagcagg
tatggaagagttaattatgtgctggctcgaagacttgaacttctacaagaggttgggcgg
ttacaagagagtcttggagtcccaggagatgtttcttacacttgtgaaacagctggccac
tttttcttataccaagtaatgtctcgttgggaggagtacatcagtaaagtgaaagttaaa
ggtggaaaatcaccagatgttgcagatgtctcccgtttctttccttttcaccagtatttt
gcaaatgctcctcaaccagttttcaaaggcaaatcatacgaagaagatatggaaattgct
gaagggtgttttagacatattaagaaaatattcactcagcttgaggaattcagagcattt
gaacttctccgcagtggcctggatagatccaaatacctcttggtgaaagaagcaaaaatc
attgccatgacttgtactcatgctgctctgaaacgacgtgacctggttgaattaggtttc
aaatatgacaacatcttaatggaagagtctgctcagattctggagatagaaacctttata
cctcttctgttgcagaacccccaggatggattcagtcgtttgaagcggtggattatgatt
ggtgaccatcatcagttgccaccagtcattaagaacatggcctttcaaaaatactccaac
atggaacagtctcttttcacacggtttgttcgtgttggagtgccaactgttgatttggat
gcacagggaagagcaagagcaagtttgtgtaacctctacaactggcgctacaagaacttg
ggtaacctgcctcacgtgcagcttctgccagagttcagaacagccaatgctggctttttg
tatgacttccagcttataaatgtagaagacttcaatggtgtaggagagtctgaacccaat
ccttatttctatcagaatcttggtgaggcagaatatgttgtggcagtcttcatgtatatg
tgcctgcttggttatcctgcagacaggataagtatcctgacaacatataatggacagaaa
cacctgatccgtgatgtcattaatcagcgatgtgggaacaatcctctgattggacggcca
aacaaggtgacaactgtggatagatttcaaggccaacagaatgattatattctcctttca
ctagtgcgtaccaaagctgtaggccacctcagggatgtccgacgattagttgttgccatg
tcaagagccagacttggactttatatctttgcaagggtatcactatttcagaactgtttt
gaactaactccagctttcagccaactcacagctcgaccacttcacctccatatcattccc
acggaatgttttccaacggcaagacagaatggagaaagaccagctcaccaaatacatgtc
attaagaacatgcctcaaatggccaactttgtatacaatatgtatatgcacatgatacag
agtacacgtcaccatcaacagcatttactacccccacctgccatgattgaagagccagaa
ccgacacaaactggagagactgaagtagaaggtgaaggtcagggcatgcaggaagatgca
gcagaagaaaatgaagtagtggaagaaacgatgaaggaaggagaattgaatgtggatgaa
atggatgaacatcgaaaaatgccagaacatcctggaagagacagtgatagtggagacagt
gaacctgagaatgagactgaaaagtga
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integrated database retrieval system
