Cinclus cinclus (white-throated dipper): 134045712
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Entry
134045712 CDS
T10813
Symbol
PPFIA1
Name
(RefSeq) liprin-alpha-1 isoform X1
KO
K26226
liprin-alpha
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134045712 (PPFIA1)
Membrane trafficking [BR:
ccic04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
134045712 (PPFIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Crescentin
BMT5-like
Motif
Other DBs
NCBI-GeneID:
134045712
NCBI-ProteinID:
XP_062351619
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All DBs
Position
6:8154842..8204219
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AA seq
1266 aa
AA seq
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MMCEVMPTISEAEIPAGGNGGHGSGSPLQSDADSHFEQLMVSMLEERDRLLETLRETQET
LALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNN
TRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRE
RLRVALERCSLLEEELGTTHKELMILKEQNNQKKTLPDGMLDINHEQENTPTTNGKRSSD
GSLCHDENLAKVIELQDIIDKQNKEQTQMKERLTSLSSRVTELEEDLDTARKDLIKSEEM
NTKLQRDVRETLAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENEIATKDSMHRQS
EDKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAALTKSDLLSPGSSAAKDAKV
LELATKLRKAEERHGNIEERLRQMEAQLEEKNQELQRARQREKMNEEHNKRLSETVDKLL
SESNERLQLHLKERMAALEDKNSLLQEIENAKKQIEELQHEKDQLVLNVDALRAENDQVR
LRATSLHHSRPDFRFPVPSSSVGDSHTDSYGTSSVLRRPQKGRLAALRDEPSKVQTLNEQ
DWERAQQASVLANVAQAFESDVDVSDVEDDRETIFSSVDLLSPSGQADAQTLAIMLQEQL
DAINKEIRLIQEEKENTEQRAEEIESRVGSGGLEAHGRFRSLGSIPPAYGGALAGSSPPG
SGRSTPRRVPHSPAREVDRLGIMTLPSDLRKHRRKSPASREEVRDDKTTIKCETSPPSSP
RSLRLDRVQKGALHTVSHEDIRDIRNSTGSQDGQTSNPSSSNSSQDSLHKAPKKKGIKSS
IGRLFGKKEKGRPGQGSKEALGQGGMGEADGSSQDALGLSKLGGQAEKNRKMQKKHELLE
EARRQGLPFAQWDGPTVVVWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGIS
NPLHRLKLRLAIQEIMSLTSPSAPPTSRTTTGNVWVTHEEMENLTATQQTEDEEGSWAQT
LAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRGQLKMVDSFHRNS
FQCGIMCLRRLNYDRKELERKREESQSEIKDVLVWSNERMIHWVVSIGLKEYANNLLESG
VHGALVALDESFDYNALALLLQIPTQNTQARAVLEREFNNLLAMGTDRRLDEDDDKSFRR
APSWRKKFRPKDIRGLAAGSAETLPANFRVTTSMSSPSMQPKKMQIDGSVSGTQRLDSAT
VRTYSC
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgaggtgatgccaaccatcagtgaggccgagattcccgccgggggaaatgga
ggccacggttcaggttccccgttgcagtcagatgccgattcccactttgagcagttaatg
gtgtccatgctggaagaaagggatcgcctgctggaaacgctccgagaaactcaggagacg
ctcgcgctcacccagggcaagctgcacgaggttggccatgagagggattccttgcagagg
cagctcaatactgcacttccacaggaatttgcagcgctcacaaaagagctgaatgtatgc
agggagcagctgcttgaaagggaagaagaaattgctgaactgaaagcagaaagaaataat
acaaggctactactggaacatttggagtgtcttgtctccaggcatgagcgatccctcagg
atgactgttgtgaagaggcaagctcagtctccagcaggagtttctagtgaagtagaagtt
ctcaaagcactaaaatctttatttgagcaccacaaagcccttgatgaaaaggtaagggag
aggttacgagtagcacttgaaagatgtagcttgttggaagaagagctaggtactacacat
aaagagttaatgattctgaaagagcaaaataatcagaagaaaacacttccagatgggatg
ctggatataaatcacgaacaagaaaatacaccaactacaaatgggaagagatcctctgat
ggttcgttgtgccatgatgaaaaccttgctaaagtgattgaactccaagacatcatagat
aaacaaaacaaagagcagacacaaatgaaagaacgcctcacttctttgtccagcagagta
acagagctggaagaagatctagacacagcaaggaaagacttaatcaaatctgaagaaatg
aacacaaagttacagagggatgtacgagagactctggcccagaaggaggacatggaggag
agaatcaccactctggagaaacgctacctcgctgcacaacgtgaagctacatctgtgcat
gacctcaatgataaacttgaaaatgaaattgccactaaagactccatgcaccgacagagt
gaagataagaacaggcaactgcaagagcgactggaactggctgagcaaaagctgcagcag
accctgagaaaagctgagactttgccagaggtggaggctgagctggcacagagagtggca
gcacttacaaagtctgaccttttgtctcctgggagctctgctgctaaagatgctaaagtt
ttggaacttgccaccaagcttaggaaggctgaggagagacacggcaatattgaggagcga
ctgagacagatggaggcacagcttgaagagaagaatcaagaactgcaaagggctagacag
agagagaagatgaatgaagagcataataaacgtttgtcagaaactgttgataagctccta
tctgaatccaatgaaaggctccagcttcatctcaaggagaggatggctgccctggaagat
aagaattcacttcttcaagaaattgaaaatgcaaaaaaacaaatagaagaacttcagcat
gaaaaggatcaacttgtattaaatgttgatgcgctaagggctgaaaatgaccaagtgaga
ctcagagccacatcacttcatcatagcaggccggatttcagattccctgtgccatcctcc
tctgtgggggacagtcacactgactcctatggcacctcctccgtgctgaggcggccccag
aaggggcgtctggctgctctcagggacgagccttcaaaggttcagaccctgaatgagcag
gactgggagcgggcccagcaagccagtgtgctggcaaacgtggcacaagcattcgagagt
gatgtggatgtgtctgacgtggaggacgacagggagaccattttcagctcggttgatctg
ctgtcaccaagtggtcaggctgatgctcagactttggccataatgctgcaggaacagttg
gatgccatcaacaaagagatcaggctgatccaggaggagaaggagaacacggagcagcgc
gcggaggagatcgagagccgcgtgggcagcggcggcctggaggcgcacggccggttccgc
tcgctgggctccatcccgcccgcctacggcggggccctggccggctcctccccgcccggc
agtggccgctccacgccgcggcgcgtcccgcacagcccggccagggaggtggacaggctg
ggcatcatgacgctgcctagtgatttaaggaaacaccgtagaaagtctccagcttccaga
gaagaggtacgagatgacaaaaccaccataaaatgtgagacatcaccaccttcttcacct
cggtctttgcgtctggacagagtccagaaaggagctctgcacacagtgagccacgaagat
atcagggacattaggaattcaacaggctcacaggatgggcaaacaagtaatcctagtagc
agtaacagcagccaagattcccttcacaaagcccctaaaaagaagggaatcaaatcctcc
attggccgcctgtttggcaagaaggaaaagggacgacctggacaaggaagcaaggaagct
ctagggcaaggtggcatgggagaagcagatggttcttctcaggatgcattaggtctcagc
aaacttggaggtcaggcagagaaaaacaggaaaatgcagaaaaagcacgagttgctggag
gaagccagaagacaaggtttgccttttgcacagtgggatgggcccactgtggtggtgtgg
ctggagctgtgggtggggatgccagcctggtacgtggctgcctgccgagccaatgtgaaa
agcggtgctatcatgtcagccctgtctgacacggaaatccagcgggaaatcggcatcagc
aatcccctgcacaggctcaagctccgcctggccatccaggaaatcatgtccctaaccagc
ccctctgcccctcccacctccaggacgaccacgggaaatgtctgggtaacacatgaagag
atggaaaatcttacagccacacaacaaacggaagatgaggagggaagctgggctcagaca
ttagcctatggtgacatgaaccacgagtggattggcaacgagtggctgccaagcctgggg
ctcccacagtaccgcagctacttcatggaatgcctggtggatgctcggatgctggatcac
ttaactaaaaaagacctgcgtgggcagctgaaaatggtggacagctttcacagaaacagt
tttcagtgtggaattatgtgcctccgaagactgaattatgatcgaaaagagctggaaaga
aaaagagaagaaagccagagtgaaattaaagatgtccttgtgtggagcaacgagaggatg
atccactgggtcgtgtccatcggccttaaggaatacgcgaataacctgctcgagagcgga
gttcacggtgcacttgtggccttagatgaatcctttgattacaatgcattagctcttctg
ctgcaaatccccactcaaaacacacaggctcgtgctgttctggagagggaattcaataac
cttcttgctatgggcactgacagaagacttgatgaagatgatgataagagctttaggaga
gcaccttcgtggagaaagaagtttagaccaaaggacataagaggtttagctgctggatca
gcagagactcttcctgcaaatttcagagttacaacctcaatgtcttcaccctctatgcag
ccaaagaagatgcagattgatggcagtgtatcaggaacacaaagattggattctgctaca
gtaaggacctactcctgttaa
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