Cinclus cinclus (white-throated dipper): 134045757
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Entry
134045757 CDS
T10813
Symbol
SSRP1
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccic03000
]
134045757 (SSRP1)
03036 Chromosome and associated proteins [BR:
ccic03036
]
134045757 (SSRP1)
Transcription factors [BR:
ccic03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
134045757 (SSRP1)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
134045757 (SSRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
SSrecog
HMG_box
HMG_box_2
SSRP1_C
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
134045757
NCBI-ProteinID:
XP_062351710
LinkDB
All DBs
Position
6:9898045..9904316
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AA seq
705 aa
AA seq
DB search
MADTLEFNEIYQEVKGSMNDGRLRLSRQGVIFKNSKTGKVDNIQASELAEGVWRRVALGH
GLKLLTKNGHVYKYDGFRESEFDKLSDFFKAHYCLELAEKDLCVKGWNWGTVRFGGQLLS
FDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDGSGEETDS
SFNPGEEDDDVAEEFDSNASASSSSGDGDSDREDKKPAKKAKIVKDRKPRKKQPESKKGK
DPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKAED
ARRDYEKAMKEYNVGSKADSHRGERSKKKKKKQEKQVKGKGDKKGASSKSSSSKSPAKGM
SDSFKSKEFVSSDESSSAESKKEDSEDEGAASPAPSSEDSASGSD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggccgatacgctggaattcaacgagatctaccaggaggtgaaggggtccatgaatgat
gggcggctgcggctgagccggcagggtgtcattttcaagaacagcaagacagggaaggtg
gacaacatccaggcttcagagctggccgagggcgtgtggcggcgagtggcactgggacac
ggcctcaagctgctcaccaagaatggccacgtctacaagtatgacgggttccgggaatcg
gaatttgacaagctctcagatttcttcaaggcccactattgtctggagcttgcagagaag
gatctgtgcgtgaagggctggaactggggcacagtgaggtttggagggcagctgctgtcc
ttcgacatcggggagcagccagtgttcgagatcccactcagcaacgtgtcccagtgcacc
acgggcaagaatgaggtgacgctggagttccaccagaacgatgatgccgaggtctcactc
atggaggtccggttctatgtgccccctacccaggaggatggcgtggaccctgtggaggcc
tttgcccagaatgtgctgtccaaggcggacgtgatccaggccactggagatgccatctgc
atcttccgggagctgcagtgcctgacaccacgcgggcgctacgacatccgcatctatccc
accttcctgcacctgcacggcaagacctttgactacaagatcccctacaccaccgtgctg
cgcctcttcctgctcccgcacaaggaccagcgccagatgttcttcgtgatcagcctggac
cccccaataaagcaaggccagacccgctaccacttccttatcctgctcttctccaaggat
gaggacatctctctgaccctcaacatgaatgaggaggaggtggagaagcgctttgagggg
cggctcaccaagaacatgtcagggtctctctacgagatggtcagccgggtgatgaaggcg
ctggtgaaccgcaagatcactgtgcccggaaacttccagggacactctggagcccagtgc
atcacctgctcctacaaggccagctcggggctgttgtacccactggagaggggtttcatc
tatgtgcacaagccccccgtgcacatccgcttcgatgagatctcctttgtcaacttcgcc
cgtggcaccaccaccacccgctccttcgactttgagatcgagaccaagcagggcacccag
tacaccttcagcagcatcgagagggaggagtacggaaagctcttcgactttgtcaacgcc
aagaagctgaacatcaagaaccgagggctgaaggagggaatgaagcagagctatgatgaa
tatgcagactctgatgaggaccagcacgatgcctacttggagaggatgaaggaggagggc
aagatccgggaggagaatgccaatgacagcagtgatggctctggggaggagacagactca
tccttcaaccctggagaagaggatgatgacgtggctgaagagtttgacagcaacgcctca
gccagttcctccagtggtgatggcgacagcgaccgcgaggacaagaaaccggccaagaag
gccaagatcgtcaaggaccgcaagccccgcaagaagcagccagagagcaagaaggggaag
gaccccaacgctcccaagcgcccgatgtcggcctacatgctctggctgaatgccagccgg
gagaagatcaagtcggaccaccctggtatcagcatcacggatctgtccaagaaggctggg
gagctctggaaggccatgtccaaggagaagaaggaggagtgggatcggaaggcggaagat
gccaggcgggactacgagaaggccatgaaggaatacaatgtgggcagcaaggctgacagc
cacaggggggaaaggtcaaagaagaagaagaagaagcaggagaagcaggtgaaggggaaa
ggggacaagaaaggtgccagctccaagtcctcatcctccaagtccccggcgaagggcatg
agcgacagcttcaagagcaaggaattcgtgtccagcgatgagagctcctctgcagagagc
aagaaggaggactcagaggacgagggagctgccagcccggcccccagctcagaggactct
gcatccggctcggattag
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