Cinclus cinclus (white-throated dipper): 134045817
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Entry
134045817 CDS
T10813
Symbol
PAX6
Name
(RefSeq) paired box protein Pax-6 isoform X1
KO
K08031
paired box protein 6
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccic03000
]
134045817 (PAX6)
Transcription factors [BR:
ccic03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
134045817 (PAX6)
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_32
HTH_Tnp_IS1
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
134045817
NCBI-ProteinID:
XP_062351822
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Position
6:2534448..2552500
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AA seq
509 aa
AA seq
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MCESLNCMRGQSTPLSDCYRRPPWDTALSAQHAEHLFIAKKPGLLESIYQEAPKRGERRA
RRAELLQGDPPKPGASGHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQ
THADAKVQVLDNQNVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRE
CPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQT
GTWGTRPGWYPGTSVPGQPTQDGCPQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRN
RTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRN
QRRQASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSMLGRTDTALTNTYSALPPMP
SFTMANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPPHMQTHMNSQPMGTSGTTS
TGLISPGVSVPVQVPGSEPDMSQYWPRLQ
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgagtccctaaattgtatgagaggacagtccaccccgctttcagactgctatagg
cgacccccgtgggataccgctctatcagcccaacatgcagaacacttatttattgctaag
aagcctgggctcttggagtcaatttatcaggaggctccaaagagaggagagcggagagcg
cgtagagcagagcttctccagggagaccctccaaagcctggagcttcaggtcacagcggc
gtgaaccagctcggcggggtgttcgtcaacgggaggccgctgcccgactccacgcggcag
aagatcgtggaactcgctcacagcggcgcccggccctgcgacatctcccggatcctgcag
acccatgcagatgcaaaagtccaagtgctggacaatcaaaacgtgtcgaatggatgtgtg
agtaaaattttgggcaggtattacgaaactggctccatcagacccagggcaatcggaggt
agtaaaccgagagtagcgactccagaagttgtaagcaaaatagcgcagtataaacgagag
tgcccctccatctttgcgtgggagattcgagacagattactatcagagggggtctgtacc
aacgataatatacccagtgtgtcgtcgataaacagagtcctacgcaacctggctagcgaa
aagcaacagatgggtgccgacgggatgtacgacaagctaaggatgctgaacgggcagacg
gggacctggggcacccgacccggctggtatcccggcacctcggtacccgggcagcccacg
caagatggctgtccgcaacaggagggaggaggggaaaacactaactccatcagctctaat
ggagaagattcagacgaggcccaaatgagactccagctgaaaaggaagctgcagagaaat
aggacatcctttacccaagagcaaatcgaagcccttgagaaagaatttgagaggacccac
tatcccgatgtgtttgcaagagagagactagctgctaaaatagacctgcctgaagcaagg
atacaggtgtggttttccaacagaagggccaaatggagaagggaagagaagctgaggaac
cagcgaagacaagccagcaacactcccagccacattcccatcagtagtagtttcagcaca
agcgtttaccagccgatcccacaaccaaccacccccgtttcctctttcacatcaggttcc
atgttgggcaggacagacacggcgctcacgaacacgtacagcgcgctgccgcccatgccc
agcttcaccatggccaacaacctgcctatgcaacccccggtacccagccagacctcctcc
tactcctgcatgctgcccaccagtccatcggtgaatggacggagctatgatacatacacc
cctcctcacatgcagacacacatgaacagccagcccatgggcacctctggcaccacttcc
acaggtctcatttcccctggagtgtcagttccagttcaagttcctggcagtgaacctgat
atgtctcaatactggccaagattacagtaa
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