Entry |
|
Symbol |
ACTN1
|
Name |
(RefSeq) alpha-actinin-1 isoform X1
|
KO |
|
Organism |
ccic Cinclus cinclus (white-throated dipper)
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:ccic00001]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134045833 (ACTN1)
04520 Adherens junction
134045833 (ACTN1)
04530 Tight junction
134045833 (ACTN1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
134045833 (ACTN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:ccic04131]
134045833 (ACTN1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:ccic04812]
134045833 (ACTN1)
04147 Exosome [BR:ccic04147]
134045833 (ACTN1)
Membrane trafficking [BR:ccic04131]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
134045833 (ACTN1)
Cytoskeleton proteins [BR:ccic04812]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
134045833 (ACTN1)
Exosome [BR:ccic04147]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134045833 (ACTN1)
Exosomal proteins of colorectal cancer cells
134045833 (ACTN1)
Exosomal proteins of bladder cancer cells
134045833 (ACTN1)
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
6:29360059..29446730
|
AA seq |
914 aa
MDHYDPQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFR
DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV
KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC
ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMT
YVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENR
APENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKM
VSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQK
DYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKIC
DQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT
IEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPHEI
NGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEM
HGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQL
LTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGY
DIGNDAQKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRLGVVTFQAFIDFMSR
ETADTDTADQVMASFKILAGDKNYITVDELRRELPPDQAEYCIARMAPYNGRDAVPGALD
YMSFSTALYGESDL |
NT seq |
2745 nt +upstreamnt +downstreamnt
atggatcactacgacccgcagcagaccaacgactacatgcagccggaggaggactgggac
cgggatctgctcctcgacccagcctgggagaagcagcagaggaagacatttacagcatgg
tgtaattctcacctccgaaaggctgggacacagattgagaacatagaggaagatttcagg
gatggtcttaaactcatgttacttctggaagtcatttcaggtgaacgtctggctaagcct
gaaagaggcaaaatgcgagtgcacaaaatatccaatgtgaacaaggccttggatttcatt
gccagcaaaggagtcaagctagtatccattggagcagaagaaatcgtggatggcaatgtt
aaaatgacccttggaatgatctggaccatcatccttcgttttgccatccaggatatctca
gttgaagaaacatctgctaaagaaggacttttgttatggtgtcagaggaagacagccccc
tacaaaaatgtaaacatccagaacttccatatcagttggaaggatggccttggtttctgt
gctttaattcatagacaccgtccagagctcatcgactacgggaagctacgaaaggatgat
cctctcactaatttaaacacagcttttgatgtggctgagaaatatctggatattccgaag
atgctggatgcagaagacattgttggaactgcacgtcctgacgagaaagccatcatgacc
tatgtttctagcttctaccacgccttctcaggagcccagaaggcggagacagcagcaaat
cgtatctgcaaggtgctggcagtcaaccaagaaaatgaacagctcatggaagactacgaa
aaactggccagtgatctgctggagtggattcgtcgcaccatcccctggctggagaacagg
gccccagagaacaccatgcaagccatgcagcagaaactggaggatttccgggactaccgt
cgcctgcacaagccccccaaggtccaagagaagtgccaacttgagatcaatttcaacacc
ttgcagaccaagctgcggctcagcaacaggccagccttcatgccctccgaagggaaaatg
gtctcggatataaacaatgcctggggtggcctagagcaggctgagaagggctatgaggag
tggttattgaatgagatccggaggctggagaggctggatcacttggcagagaagttccgg
cagaaggcatccattcatgagtcctggacagatggtaaggaagcaatgctgcagcagaag
gattacgaaactgcaaccctctcggagataaaggccctgctgaagaaacacgaggccttt
gagagtgacctggctgcacaccaggaccgcgtggaacagattgctgctattgcacaagag
ctcaatgagctagactattacgactctcccagtgtcaatgccaggtgccagaagatctgt
gaccagtgggataatctgggtgccttaacccagaaacgtagagaagccttggagagaaca
gagaaactactggaaacgattgatcagttgtacctggagtatgccaaacgagctgctccc
ttcaataactggatggaaggggccatggaggatctgcaggatacattcatcgttcacact
attgaggagatccagggattgaccacagctcatgagcagttcaaagccacgttgccagat
gctgacaaggagcgacaggccatcctgggaatccacaatgaagtctcaaagattgtccag
acgtatcatgtcaacatggcaggaacaaatccttacaccacaatcaccccacatgagatc
aatggcaaatgggaacatgtgcggcagctggttcccagaagggatcaagccctgatggaa
gaacacgctcgccagcagcaaaatgaacgacttcgtaaacagtttggtgcacaggccaat
gtcattggaccctggatccagaccaagatggaggagattggccgcatttcaatagagatg
catgggaccctggaggaccagctcaaccacttgcggcagtacgagaaaagcattgtgaat
tacaaaccaaaaatcgaccagctggaaggagaccaccagctgatccaggaagcacttatc
tttgacaacaagcataccaactacaccatggagcatatccgtgtgggctgggagcagtta
ctaacaacaattgctagaaccatcaatgaagtggaaaaccagattctgacccgtgatgcc
aaaggaatcagccaggaacagatgaatgagttccgggcttctttcaaccactttgacagg
gaccactccggcacacttggccctgaggagttcaaagcctgtctcatcagcttgggttac
gatattggaaacgatgcacagaagaagactggtatgatggattgtgaagatttccgagcc
tgccttatctccatgggttacaatatgggagaggcagagtttgcccgcatcatgagcatc
gttgacccgaaccgtttgggtgtagtgaccttccaggccttcattgacttcatgtcccgg
gaaactgcagatacagatactgctgaccaggttatggcttccttcaagatcctggctgga
gataagaactacatcactgtggatgagctgcggcgggagctgcctcctgaccaggctgaa
tactgcattgctaggatggcaccctacaatggccgcgatgccgtgcccggtgccctggac
tacatgtccttctccacagcgctctacggcgaaagtgacctttaa |