Cinclus cinclus (white-throated dipper): 134045952
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Entry
134045952 CDS
T10813
Symbol
BTAF1
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccic03021
]
134045952 (BTAF1)
Transcription machinery [BR:
ccic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
134045952 (BTAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
Vac14_Fab1_bd
TOR1L1_N
HEAT_MROH2B_C
HEAT_2
HEAT_GCN1
HEAT_GCN1_C
TPR_Trm732_C
ARM_ECM29
ARM_TBCD_2nd
UFL1_C
Motif
Other DBs
NCBI-GeneID:
134045952
NCBI-ProteinID:
XP_062352077
LinkDB
All DBs
Position
7:15318110..15362285
Genome browser
AA seq
1844 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLVYLRSTNWDTRI
AAGQAVEAIVKNVPEWNPTPRSKQEPGSESPSEDAPSTDRLRFDRFDICRLLKHGASLLG
SAGAEFEVQDDKSGEIDPKERIARQRKLLQKKLGLDMGAAIGMNTEDLFNDEDLDYSPSS
VLLVNKQPTLQAAELIDSEFRAGMSSRQKNKAKRMAKLFAKQRSRDAVEANEKSNDSTDG
EPEEKRRKVANVVINQPATDSKALVENTQEEANEWPLESFCEEVCNDLFNPSWEVRHGAG
TGLREILKAHGKSGGKMGDSSLEEMIQQHQEWLEDLVIRLLCVFALDRFGDFVSDEVVAP
VRETCAQTLGVVLKHMNDTGVHKTVDVLLKLLTQEQWEVRHGGLLGIKYALAVRQDMINT
LLPKVLPAIIEGLQDLDDDVRAVAAASLVPVVESLVQLQSQKVPFILNTLWDALLELDDL
TASTNSIMILLSSLLTYPQVRKCSIQQSLTVLVPRVWPFLHHTISSVRKAALETLFTLLS
TQDQSSSTWLTPILQDMLRHIFQFCILESNQEILDLIHKVWLELLNKASVQYVVAAACPW
MGAWLCLMMQPSHLPIDLNMLLEVKTRSKEKAGAKLRQSQTQNKEVIQEYIAGADSIAED
PATRDYVVMRARMMAAKLLGALCCCICDPGVNTVTQEIKPAESLAQLLLFHLNSKSALQR
ISVALVICEWAALQKECTTVAVCVQPRLLGVLSEHLYYDEIAVPFTRMQNECKQLISLLA
DAHIDIGNRVNCSVFTIDQANELVTSVFNEVTSSFTLNPKVLQQLDSKRQQVQMTVTETN
QEWQVLHLRVHTFAACAVVNLQQLPEKLNPVIKPLMEAIKKEENTLIQNYVASCIAKLLQ
QCTTRSPCPNSKIIKNLCNSLCVDPHLTPLAACPAQPQSSQENSKGPNSDKDGMQHTVTK
HRGIITLYRHQKAAFAITSRRGPTPKAPKAPIADLPTGSSGSIPTELDEAQKPYVVQRRG
AEFALSTIAKHFGAEMATGLPHLWDAMVGSLRNNIHINNFDRKLLLEKGDAPAQELVNSL
QVFETTAASMDTQLHPLLIQHLPHLYMCLQHPSTAVRHMASRCVGVMSKIATMETMNIFL
EKVLPWLGAIDDNTKQEGAIEALACVMEQLDVGIVPYIVLLVVPVLGRMSDQTNSVRFMA
TQCFATLIRLMPLEAGIPDPPNMSEELIRMKAKERHFLEQLLDGKKLENYEIPVPIKAEL
RKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCLRAQEYARTKLVDSVP
LPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERARLQHQVKKHNLIVASYDVV
RNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSL
FDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMEALHRQVLPFLLRRMKE
DVLQDLPPKIIQDYYCILSPLQVQLYEDFAKSRAKCDIDETVSSISMNEETEKPKLKSTG
HVFQALQYLRKLCNHPALVLTTQHPEYKRITEQLAAQNSSLRDIQHAPKLSALKQLLLDC
GLGNGGSSESGTEAVVAQHRVLIFCQLKSMLDIVEHDLLRPQLPSVTYLRLDGSIPAGQR
HSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQK
RVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENASLQSMGTEQLLDLFTLDKDGKT
EKADTSTSSGKASMKSVLENLGELWDQEQYDTEYSLENFMHSLK
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atggccgtctccaggcttgatcgtctctttattttactggacaccggtacaacaccagta
acaagaaaagcagctgcacaacaacttggggaagtagtgaaactgcatcctcatgagctg
aataatctcttatctaaagtgttagtgtatttaagaagtacgaattgggatactcgcatt
gcggctggccaggctgtcgaagcaatagtgaaaaatgtacctgaatggaatccaactcca
agatcaaaacaagaaccaggctcagaaagtcctagtgaagatgcaccttcaacagatcgc
ttgcgttttgacagatttgatatatgtcggttgttaaaacatggtgcgtctcttcttgga
tctgctggtgcagaatttgaggtccaagatgataaatcaggtgaaattgatcctaaagag
aggatagcaagacagaggaagctgctgcagaagaaacttggcttagatatgggtgctgca
attggcatgaatactgaggatctgttcaatgatgaggatctggactattctccttcttca
gttttactagtaaacaaacaacctactcttcaggctgctgagttaattgactcagaattt
cgagctggtatgagcagtagacaaaagaataaagccaaaagaatggctaagctatttgca
aagcaaagatccagagatgcagtggaagctaatgagaagagcaatgatagcactgatggg
gagccggaagaaaagagaagaaaagttgcaaatgttgtcatcaaccagcctgccacagac
tcaaaagcattggtagaaaatactcaggaagaggcaaatgaatggcctctggaaagcttt
tgtgaagaggtgtgcaatgatctctttaacccttcttgggaggttcgacatggtgcaggt
actggactgagagagatacttaaagctcatggtaaaagtggtggtaaaatgggagatagc
tctttagaggagatgattcagcagcatcaggagtggttagaagacttggttattagactt
ctttgtgtgtttgcactagacagattcggagactttgtttcagatgaagtagtggcaccc
gtacgtgagacttgtgctcagactttgggagtagtattgaaacacatgaatgacactggt
gttcataaaactgtggatgttctcctgaagctgcttacacaggaacagtgggaagtgaga
catggtggtctcctagggataaagtatgctttggcagtacgtcaggacatgatcaacact
ttattgcctaaagtattgcctgcaataattgaaggtctgcaagatttggatgatgatgtc
cgagctgttgctgcagcatctttagtaccagtagtggaaagcctggtccaacttcaatct
cagaaggtaccttttattcttaataccttgtgggatgcacttctggagttggatgacttg
acagcttccacaaacagtatcatgatccttctttcatcccttctgacttaccctcaggtc
cgcaaatgcagtattcagcaatccctgacagttttggtccctcgtgtgtggccgttcttg
catcacacaatatcttctgtgcgcaaagcggcactggaaacgttattcacactattgtct
acccaagaccagagttcttcaacgtggctgactccaatactgcaagacatgttgaggcac
atatttcagttttgtatcttagaaagcaaccaagaaattctggatcttattcacaaggta
tggctggaactgttaaacaaggcatctgtacagtatgttgttgcagctgcttgtccatgg
atgggagcctggctgtgcttaatgatgcagccatctcatttgcccattgacttaaacatg
ttgctggaagtaaaaaccagatccaaagaaaaagcaggtgctaaactgcgtcaaagtcaa
acccagaataaggaagtgattcaggaatacattgctggggcagacagcattgcagaagat
ccagcaaccagggattacgtcgtcatgcgtgctcggatgatggcagcaaagttgctggga
gcactttgttgctgcatttgtgacccaggtgtaaatactgttactcaagaaataaagcca
gctgaatcattagctcagctactgctcttccacttgaattctaaatctgccttgcagagg
attagcgttgcattagtaatctgtgagtgggcagccttgcaaaaggagtgtacaactgtg
gctgtttgtgtacagcctcgtttacttggggtcctttctgaacatctctattacgatgaa
attgctgttccttttacacggatgcaaaatgaatgtaaacaactcatctcactgctagct
gatgcacacattgatattggaaacagagtaaactgcagtgtatttacaatagatcaagct
aatgagctggttacctctgttttcaatgaggtgacatcatcctttactttgaaccctaaa
gttctgcaacagttggacagtaaaaggcagcaagtccaaatgactgttacagaaacaaat
caagaatggcaagtgttgcatctgcgagtccatacctttgctgcatgtgcagttgtgaac
ttgcagcaacttccagaaaaactaaatcctgttataaaacccttaatggaagctatcaaa
aaagaagagaatacactcatacaaaactatgtggcttcatgtatagcaaagttacttcag
cagtgtacaacaagatctccttgtcccaactcaaagattataaaaaatctctgcaattcc
ctgtgcgtggatccacaccttaccccgctagcagcatgtcctgcacagcctcagagtagc
caggaaaactccaaagggcccaactctgataaagatgggatgcagcacacagtcactaag
cacaggggaataattacactgtacagacatcagaaagctgcttttgccatcacaagtcgg
cgaggtcctactccaaaagctccaaaagcccctattgcagatctccccacaggcagcagt
ggaagcattcctacagaacttgatgaggctcagaaaccttatgttgtacagagaagagga
gctgagtttgccttatctactatagctaaacattttggtgctgaaatggcaacgggattg
ccacatctctgggatgctatggttggttcgttaaggaacaacatacacattaataacttt
gatcgaaagttgttactggaaaaaggagatgctcctgctcaggagctggtgaattccttg
caggtttttgaaacaactgcagcttcgatggatactcagctacatcctctgttaatacag
catttgcctcatctttacatgtgccttcaacatcccagcactgctgtgagacacatggct
tcccgttgcgtgggtgttatgagcaaaatagcaaccatggaaacaatgaatatctttcta
gagaaagttctgccttggctgggagcaatagatgacaacaccaaacaagaaggtgcaatt
gaagcacttgcgtgtgttatggagcagttggatgttggtattgttccatacattgttctt
ctagtggttccagttctgggtagaatgagtgatcagacaaacagtgtccgttttatggct
actcagtgctttgccacactgattagactgatgcctcttgaggctggtataccagaccca
ccaaacatgtccgaagaattaatcagaatgaaggccaaagaacgtcactttctggaacaa
ttactggatggaaaaaaactggaaaactatgaaattccagtaccaatcaaagcagagctc
agaaaatatcagcaggatggagtgaactggcttgcatttctcaataaatataaacttcat
ggaattctttgtgatgacatgggcttaggaaaaactttacagtccatttgcattcttgca
ggtgatcattgcctcagggctcaggaatatgcaagaacaaaactggtggacagtgttcct
cttccctctttggtggtgtgtcctcctacactcacgggacactgggtggatgaagtgggc
aaattttgctcgaaagaatatcttaatccattgcactatacaggacctcctactgagaga
gcaagattgcaacaccaggtgaagaaacacaatctcatagtggcttcatatgatgttgta
agaaatgacattgacttcttcagaaatattaagtttaattactgcattcttgatgaaggc
catgtaataaaaaatggaaaaacaaagctatcaaaagcagtaaaacagctgactgctaat
tacaggataattctttctgggacaccaatccagaacaacgtcttagagttgtggtcattg
tttgacttcctaatgccaggattcttgggcactgaacgccagtttgcagctcgttacggc
aaaccaatcctggcaagcagagatgcccgaagctccagtcgagagcaagaggctggggta
cttgcaatggaagctctgcaccgccaagtcctgccgttcctgctaagaagaatgaaagag
gatgtgctgcaagatcttccacccaaaattattcaagattattactgtattctcagtcct
ctacaggttcagctttatgaagattttgccaagtctcgtgccaaatgtgatattgatgaa
actgtttcttcaatttcaatgaatgaagaaactgaaaaaccaaagcttaaatctacaggt
catgtatttcaggcattgcagtacttacggaagctctgcaaccatccagcgttagtgctc
acaacccaacatccagaatataagagaattacagagcaacttgcagctcagaattcatcc
cttcgggatatccaacatgcacctaagctgtctgcattaaaacaactgctgctagactgt
ggtttggggaatggtggctcttcagaaagtggtacagaagctgttgtggcccagcacaga
gtgcttatcttctgtcagctgaagagtatgctggatatagtggagcatgaccttctcaga
cctcagttaccttcagttacttacttacgactggatggcagcattcctgctgggcaaaga
cattccattgtttcccggtttaataatgacccatctatagatgttcttttgctcaccact
catgttggtggactgggacttaacttgacaggggctgacacagttgtatttgtggaacat
gactggaacccgatgagagacctgcaagccatggatcgggcacatcgcattgggcagaaa
cgtgttgttaatgtgtatcgcctgataaccaggggaactctggaagagaagattatgggt
cttcaaaagttcaaaatgaatattgcaaatacagtgatcagccaagaaaatgcaagccta
cagagcatgggaacagagcagcttctcgatctgttcactcttgacaaggatggcaaaact
gaaaaagcagatacctctacctcttctgggaaagcatcaatgaaatcagtactcgaaaac
cttggagaactatgggatcaagagcagtatgacactgaatacagtcttgaaaactttatg
cattcattaaagtaa
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integrated database retrieval system
