Cinclus cinclus (white-throated dipper): 134046002
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Entry
134046002 CDS
T10813
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
134046002 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
134046002 (EXOSC1)
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Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
134046002
NCBI-ProteinID:
XP_062352182
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Position
7:complement(13856041..13858228)
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AA seq
212 aa
AA seq
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MPRTGPAGSERCARSGKPRQLLNPCVAGERLCSTEEATAGSGTYTRHGFIFSSLAGCLER
KKEDNELPVVSVVRDSESQLLPNVGAVVTCKVCSINSRFAKVHILYVGSTPLKSTFRGTI
RREDIRATEKDKVEVYKSFRPSDIVLAKVISLGDAQSNYLLSTAENELGVVVARSEAGVQ
MVPISWCEMQCPRTHTKEFRKVARVQPQFLQT
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcactgggccggctggaagcgagcgctgtgctcggagcgggaagccccggcag
ctcctgaatccctgtgtcgcaggtgagcggctgtgcagcacggaggaggccacggctggt
agtgggacctacactcgtcatggcttcatattctcctcgctggctggctgcctggagagg
aaaaaggaggacaacgagctgcccgtggtgtcggtggtgagagacagcgagtcccagctc
ctgcccaacgtgggggctgtggtgacctgcaaggtctgcagtattaactctcgctttgcc
aaggtgcacatcctgtatgttggctccacgccgctgaaatccactttccgaggcaccata
cggagggaagatatccgagccacggagaaggataaggtagaagtgtacaagagcttccgc
cccagtgacattgtcctggccaaagttatctccctaggggatgcacagtccaactacctg
ctgagcacagcagagaatgagctgggcgtggtggtggcacgaagtgaggcaggggtgcag
atggtgcccatcagctggtgtgagatgcagtgcccacggacacacaccaaggagttccgt
aaggtggcccgagtacagccccagttcttacagacgtag
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