Cinclus cinclus (white-throated dipper): 134046067
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Entry
134046067 CDS
T10813
Symbol
SORCS3
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134046067 (SORCS3)
Membrane trafficking [BR:
ccic04131
]
Endocytosis
Others
Others
134046067 (SORCS3)
Endosome - Lysosome transport
134046067 (SORCS3)
Endosome - Golgi transport
134046067 (SORCS3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
134046067
NCBI-ProteinID:
XP_062352278
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All DBs
Position
7:complement(11133864..11397563)
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AA seq
1220 aa
AA seq
DB search
MEKGTNCFPTCHTIFLAWTWFLLLSWCFTGAEITCRSCSSPSPSWPSSSSRLRQDQRQPP
PPRGLRSWPGGRARGSLGAAAAAEPEPEPVPVPVPGAEPGGQAGPRGAALGAAGAGGGAP
GGRGPAAPRTRRSTEGRRALPAGGVRGVPAAEGQRGGRAQPRGPPEDGRAARLRGAEEPR
LSSTTFALTGDAAHNQAMVHWSGHNSSVILILTKLYDFNLGSVTESSLWRSTDYGTTYEK
LNDKVGLKTVLSYLYVSPTNKRKIMLLSDPEIESSILISSDEGATYQKYRLNFYIQSLLF
HPKQEEWILAYSLDQKLYSSMDFGRKWQLMHERVTPNRFYWSVTSLDKEPDLVHMEARTA
DGHTHYLTCRIQECSETKRSGPFSRSIDVSSLVVQDEYIFIQVTTGGRATYYVSYRREPF
AQIKLPKYSLPKDMHIISTDENQVFAAVQEWNQNDTYNLYISDTRGVYFTLALENVKSSR
GLEGNIVIDLYEVAGIKGIFLANRKVDDQIKTFITYNKGRDWRLLQAPDTDLRGHTVLCQ
LPFCSLHLRLQLSENPYTSGSISSKETVPGLLVATGNIGSELSYTDVGVFISSDGGNSWR
QIFEEEYNVWFLDWGGALVAMKHTSVPIQHMWVSFDEGRSWTKYSFTSTPLFVDGSLVDP
GIETQIMTVFGHFSLRSEWQLVKVDYKSLFSRRCTKDDYQTWHLHNQGEPCVMGERKIYK
KRKPGAQCSLGRDYSQTVVSEPCVCGQGDFECDYGYERHSNNQCIPAFWFSPSSLSKDCN
IGQNYWNSTGYRRIVSNNCTDGLREKYMARMEKCPGKAPQGLHILTSNGKLVMEQGHNAT
FIILMEEGDLQRTNIQLDFGDGIAVSYANFSPVEDGIRHVYKSAGIFQVTAYAENSLGSD
TAVLFLHVVCPVEHVHLSVPFVAIRNKDVNITAVVWPSQAGTLTYFWWFGNSTKPLITLE
SSISYMFTVEGMNTVTVQVAGGNTLIQDTKEIAVHEYFQSQLLSFSPNLDYYNPDIPEWR
QDVGKVIKRALAQVTGIPDEQILVAVFPGLPTSAELFILPHKNTTERRKNSEADLEQVVE
ILFNALNQNLVQFELKPGVEVVVYVTQLTLAPLVDSSSGHSSSAMLMLLSVVFVGLAVFL
IYKFKRKIPWINIYAQVQHDKEQEMIGSVSQSENAPKITLSEFTDPEELMDKELDTRVMG
SISTIANSESTKEIPNCTSV
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggggaccaactgctttccgacctgccacaccatttttctcgcctggacatgg
ttcttacttctctcttggtgtttcaccggcgccgaaataacttgcagatcctgctcatct
ccatcgccctcctggccgtcctcctcgtctcgccttaggcaggaccagcgacagccgccg
ccgccgcgaggattacggagctggccgggcggccgagcgcggggctcgctcggggcggcg
gccgccgcggagccggagccggagccggtgccggtgccggtgccgggcgcggagccgggg
ggccaagcggggccgcggggagcggcgctcggcgcggcgggggcgggaggcggcgcgccc
gggggccggggcccggcggcaccgcggacccgccggagcaccgaggggcgccgggcgctg
ccggccggcggggtccggggggtgcccgcggccgagggacagcgcggcggccgcgctcag
ccccgcgggcccccggaggatgggagagcggcgcggctgcgaggggccgaggagccgagg
ctgagcagcaccaccttcgcccttaccggggatgcggcgcacaaccaagccatggtgcac
tggtccggccacaacagcagcgtgattctcattctgacaaagctctacgacttcaacctg
gggagtgttacggagagttcactgtggaggtcaacagactatggcactacctatgaaaaa
ctaaatgacaaagtaggcctgaagactgtgctgagctacctgtatgtcagtcccactaac
aagaggaagatcatgcttcttagtgatccagagattgagagcagcatcctcatcagctct
gatgaaggggccacctatcagaagtaccgtttgaacttctatatccagagcttgctcttc
caccccaagcaggaggagtggatcttggcctacagtctggatcaaaagctgtacagctcc
atggactttggaagaaaatggcagctcatgcatgagcgggtcactccaaacaggttttac
tggtcagtgactagtttggataaagaacctgacctcgtgcacatggaagcccggacagct
gatggacacactcactatttgacctgtcggatccaggagtgctctgagaccaaaaggagc
gggcccttctcgcgctccatcgacgtcagctcccttgttgttcaggatgagtacatcttc
atccaggtgacaactggtggaagagcaacttactatgtgtcatacagacgggagcctttt
gcacagattaaattacccaaatactctcttcctaaggacatgcatattatcagcacagat
gagaatcaggtctttgcagctgttcaagagtggaaccagaatgatacctataacctgtac
atctcagacacccgaggggtctacttcaccctggccctggaaaatgtgaagagcagccga
ggactggaggggaatattgtcattgacctttatgaggtagcagggatcaaaggcatattc
ctggctaacaggaaggtagatgaccagatcaaaactttcattacctacaacaagggcaga
gactggcgtttgctgcaggcaccggacactgatctaagagggcatactgtactttgccag
ctgcccttttgctcattgcacttgcgtctgcagctctcagagaatccgtatacttcaggg
agcatttccagcaaagagacagttcctgggctgctggtggcaacaggcaatattggctct
gaactttcctacacggatgttggtgtgttcatctcttctgatggtggcaattcctggaga
cagatctttgaggaggaatacaatgtttggtttctggactggggaggggcactagtggcc
atgaaacacacctcagtgcccatccaacacatgtgggtgagttttgatgagggaagatcc
tggactaaatacagtttcacatcaacaccactttttgtggatggatcccttgtagaccct
gggatagagacccagataatgacagtttttgggcacttcagtctccgttctgagtggcag
ctggtcaaggtggattacaagtctctcttcagccgcaggtgtaccaaggatgactaccaa
acctggcatctccacaatcagggggagccttgtgtcatgggagagaggaagatctataaa
aaacgcaagcctggagcccagtgttccctaggtcgggactattcccaaactgtggtgtct
gagccgtgtgtctgtggccaaggagactttgagtgtgactatggatatgagaggcacagc
aacaaccagtgcatcccagccttctggttcagcccatcctccctgtccaaggattgcaac
attggtcagaactactggaacagcactgggtacagaaggattgtgtctaacaactgcaca
gatggcttgcgagagaagtacatggccaggatggagaaatgccctggaaaagcacctcag
ggattgcacatcctcacctccaatgggaagctggtcatggagcaggggcacaacgccacc
ttcatcatcctcatggaagagggtgatctccaaaggacaaacatccagcttgattttgga
gatggcattgcagtgtcctatgccaatttcagccctgtggaggatggcatccgccacgtg
tataagagtgctggaatcttccaggtgacagcatatgcagagaacagcctgggctcagac
actgctgtccttttcctgcacgtggtctgtccagtggagcacgtccatctgagtgtcccc
tttgttgccatcaggaataaggatgtcaacatcaccgcagtagtttggcccagccaggca
ggcacacttacctacttctggtggtttggcaacagcaccaagcccctcatcaccttggag
agcagcatctcgtacatgttcactgtggaggggatgaacactgtcactgtgcaagtcgct
gggggcaacaccctcatccaggacaccaaggagatcgccgtgcatgagtatttccaatct
cagctcctgtcattttctcccaacttggactactataaccctgacatccctgaatggaga
caagatgttggcaaagtcatcaagagagcactagcacaggtgactggaatccctgatgaa
cagatcctggtagctgtgttccctgggctgcctacatctgctgaactcttcatactgccc
cacaaaaacacaacagagaggaggaaaaacagtgaggctgatctggagcaagtggtagaa
atcctttttaatgctctcaaccagaacctggtccagtttgaactgaagcctggcgttgaa
gtggttgtgtatgttactcagttgacattagcaccccttgtggattccagctcaggtcac
agcagttcagcaatgctgatgttgttgtcagtggtgtttgtgggcttggctgttttttta
atctacaaattcaagaggaaaatcccttggattaacatctatgcccaagttcagcatgac
aaggagcaggaaatgattggctctgtcagccaaagtgagaatgcccccaaaatcaccctg
agtgagttcacagatcctgaggagctgatggacaaagagctggacacacgagtgatggga
agcatctcaacaattgccaacagtgaaagcacaaaggaaatccccaactgcactagtgtt
taa
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