Cinclus cinclus (white-throated dipper): 134046080
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Entry
134046080 CDS
T10813
Symbol
RARB
Name
(RefSeq) retinoic acid receptor beta isoform X1
KO
K08528
retinoic acid receptor beta
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccic03000
]
134046080 (RARB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ccic03310
]
134046080 (RARB)
Transcription factors [BR:
ccic03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
134046080 (RARB)
Nuclear receptors [BR:
ccic03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
134046080 (RARB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
134046080
NCBI-ProteinID:
XP_062352294
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Position
1:38295046..38486075
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AA seq
484 aa
AA seq
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MTTSSRTCPVPAVNGHMTHYPAAPYPLLFPPVIGGLSLPSLHGLQSHPPTSGCSTPSPAS
IVRELSVHQRTFCGEGTPHPLKWLHRSQAVETQSTSSEELVPSPPSPLPPPRVYKPCFVC
QDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCVINKVTRNRCQYCRLQKCFEV
GMSKESVRNDRNKKKKEPSKQESTENYEMTAELDDLTEKIRKAHQETFPSLCQLGKYTTN
SSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTSLTIADQITLLKAACLDILIL
RICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSA
ICLICGDRQDLEEPMKVDKLQEPLLEALKIYIRKRRPNKPHMFPKILMKITDLRSISAKG
AERVITLKMEIPGSMPPLIQEMLENSEGHEPLTPTSNGNTAEHSPSISPSSVDNSSVSQS
PMVE
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccagtagccgcacatgtccagtaccggccgtgaatggacatatgactcactat
ccagcagcaccatatcccttactttttcctccagtcattggtggactgtcactaccttcc
cttcatggactccagagtcacccaccaactagtggatgcagcaccccctcacctgcaagc
attgtcagagagctttcggttcatcaaaggactttttgtggagaggggacaccacatcca
ttaaagtggctgcacaggtcccaggcagttgaaactcagagcaccagttctgaggaactt
gttccgagccctccttcaccacttccaccccctcgtgtttacaagccctgttttgtttgt
caagacaagtcatctggatatcactatggtgtcagtgcttgtgagggatgtaagggcttt
ttccgcaggagtatccagaagaacatggtttacacatgtcacagagataaaaactgtgtt
atcaataaagttaccagaaatcgctgccagtactgcagactacaaaagtgctttgaagtg
ggaatgtccaaagaatctgtcagaaatgataggaacaaaaagaagaaggaaccttcaaag
caggagtccacagaaaactatgaaatgacagcagaattagatgatctcactgagaagatc
cgaaaagctcaccaggaaaccttcccctcactctgccagctgggaaaatacactacgaac
tccagtgcagatcatcgggttcgactggatcttgggctttgggacaaattcagtgaactt
gcaacaaagtgcattattaaaatagtagaatttgcaaagcgattgccaggctttacaagt
ttgaccattgcagaccaaataactttactcaaagcagcctgcctggatatactgatcctt
agaatttgcacaagatacacaccagaacaagacaccatgaccttttcagatggccttacc
ctaaaccgaactcagatgcacaacgccggatttggcccgctgactgatctcgtgttcaca
tttgccaaccagctcctgcctttggaaatggatgatacagaaacaggtctccttagtgcc
atctgcctaatctgtggagatcgccaggaccttgaggaaccaatgaaagtggataagctt
caggaacccttgcttgaagcactgaaaatttatatccgaaagagacgacccaacaagcct
catatgttcccaaagatcttaatgaaaatcacggatcttcgtagcatcagtgcaaaaggt
gcagaacgtgtcattacattgaaaatggaaattcctggatccatgccacctcttattcag
gaaatgttggagaactctgaaggacatgaaccactgacaccaacctcaaatggaaatact
gcagaacacagtcccagtatctcacctagttcagtggataacagcagtgtcagtcaatcc
cctatggtggaataa
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