Cinclus cinclus (white-throated dipper): 134046136
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Entry
134046136 CDS
T10813
Symbol
RRP12
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccic03009
]
134046136 (RRP12)
Ribosome biogenesis [BR:
ccic03009
]
Eukaryotic type
90S particles
Other 90S particles
134046136 (RRP12)
Pre-60S particles
Other pre-60S particles
134046136 (RRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
134046136
NCBI-ProteinID:
XP_062352389
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Position
7:complement(13840692..13852489)
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AA seq
1296 aa
AA seq
DB search
MARSGRLRSGAAAKLKRWRKGHSSDSNPETRQHRLAARSRFCSRPAEKSNLTVDAVKLHN
ELQSGSLHLERASGSAQFRMEGDGSEEAATEKSSGTFLSGLSDCTNITFSKVQRFWESNS
ATHKEICAVLAAVTEVIRSQGGKESETEYFAALMTTLEAVESPESLSAVAYLLNLVLKRV
PSPVLIKKFSDASKAFMSIVSSQACSSSTSALRWVLSCLATLLRKQDLAAWSYPVTLQVY
HGLLSFCVHTKPKVRKAAQHGVCSVLRGSEFMFGDAAPEHHPAAPSTAKFCVQEIEKAGG
AKEATTTLHVLALLRDVLPCFPAALVKTCCETLLRVMTLSHVLVTACAMQAFHSLFSAQT
SVACLPAELNAQIITALYDYVPSTSDLQPLLTWLSTMERAHINLARLQKDLCWAHLPRFF
SAAMNCFLSPHSQVVSAAAQSLETLLTECIAPHMEDMGTVSASAPAPAAYLCKMFRSVEE
GLTYRFHAAWEQVLRVLEIFFETCGKQCHPIMRKCLQSLCDLRLSPHFPYTAEVDQAVGA
AVSTMGPEVVLETVPLEINGKEETLDFPRSWLLPVLRDNVQGARLGFFTSYFLPLAAALK
SRALEFTQAGKNVEAKIYDTLQWQVWTLLPGFCTRPTDVLGAFKGLARTLGMAISERPDL
RSTVCQALRTLIHKGCETDAERAEVGRFAKNFLPILFNVYSQPEEDGGTSAQRRSVLDTV
RAYLTITDPQMVCGFLEKASAKLTSPESSEFTRLSILDLVVAMAPYADEQSLDSLYCTIQ
PSLQSKERSMQKKAYRVLEEVCAAPHAPCQAFVRSHLQDLQAALLDSLKSAASPAKRPRL
KCLFHIVKQLSAEHEPFVTALVPEVILCTKEVSVGARKNAFMLLVEMGHAFIRFGPTPEE
AMQRFLLLIYVGLTGSVTMISCTVLALTRLFFEFKDHLEFSVVEQLLQNICLLLASRTRD
VVKAALGFLKVTLLLVDTKLLAKHVQTMLEAVGNLSDDMRRHFRMKLRNLFIKFIRKFGF
ELVKGLLPAEYHKVLVNIRKAESRSRKQRALKKAAADMDEEEAPAPQPRGDSMEEILADS
EDEEEEEEEQHRSKEWRKQARQKGQAWLKEGEDDEPLNFLDPNVSQRVLATKPVPRRSRG
VSHDFQMSEDGRLIIHEEEEELDDDDETKGADEEMADVLQDVGLRSKKSQKRRFREEPDD
EEAEAGTYSQYKAGGSGIHRPLKKEPAFGAEYKSKKGKGDVKKKGQLDPYAYIPLNRAKL
NKRKRAKMQGQFKGLMKGAQRGAKAGRRNRLKSQRS
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggagtgggaggctccggtcgggagctgcggccaagctgaagcgctggcggaag
ggccatagcagtgactccaaccccgagacccgccagcaccgtctggctgcccgcagccgc
ttctgtagccggccggcggagaaaagtaacttgacagtggatgcagtgaagctgcacaat
gagctgcagtcggggtccctgcatctggagcgggcgagtggcagtgctcagttccgtatg
gagggggacggttctgaagaggctgccacggagaaatcctccggcaccttcctgagcggg
ctgagtgactgtactaacatcaccttcagcaaggtgcagcgcttctgggagtccaactct
gccactcacaaagagatctgtgccgtgctggcagctgtgacagaggtgatccgctcccag
gggggcaaggagagcgagacggaatactttgctgcactgatgaccacactggaggcagtg
gagtctcctgaatcactgtctgctgtcgcctacctgcttaaccttgtcctaaagcgggtc
ccgagccctgttcttattaaaaagttctcagatgcctcaaaagccttcatgagtatcgtg
tcctcacaggcctgcagcagctccacctctgccctgcgatgggtcctctcttgcctggcc
acgctgctacggaagcaagacttggcagcctggagctaccctgtcacactgcaggtctat
catggcttgctgagcttttgtgttcataccaaacccaaggtgcggaaagcagcacagcat
ggggtgtgctctgttctgaggggcagtgagttcatgtttggcgatgcagcccctgagcat
caccctgcagcaccctccaccgccaagttctgtgtacaggagattgaaaaagctggaggt
gccaaggaggccaccaccaccctgcatgtccttgccctgctgcgggatgtgctgccctgc
ttccccgcagctctggtgaagacctgctgtgagaccttgctccgagtcatgaccctcagc
catgtgttggtgacagcatgtgccatgcaagctttccacagcctcttcagtgcccagacc
agtgtggcctgcctgccagctgagctcaatgcccagatcatcactgctctctacgactat
gtgcccagcacgagtgacctgcagccactgctgacctggctgtccaccatggagcgggca
cacatcaacctggccaggctgcagaaggatctgtgctgggctcacctgccccggttcttc
tctgctgccatgaactgcttcctctccccacactcccaggtggtgtcagcagcagcgcag
agcctggagaccctcctgactgagtgcattgctccccacatggaggacatgggcactgtg
tctgcatctgccccagcccctgctgcctacctgtgcaagatgttcagatcagtggaggaa
gggctgacataccgtttccatgcagcgtgggagcaagttctgcgagtgctggagatcttc
tttgagacatgtgggaagcagtgccatcccatcatgaggaagtgtctccagtccttgtgt
gacctgcgtctctccccacactttccctatacggctgaagtggaccaggcagtgggggct
gctgtgagcaccatgggtcctgaggtagtactggaaactgtgcccctggagatcaatggc
aaggaggagacactggatttcccccgcagctggctcctgccagtgctgcgggacaatgtg
cagggtgcgcggcttggcttcttcaccagttacttcttgcctttggcagccgctctgaaa
agcagagccctggagtttacccaggctggaaagaatgtggaggccaagatctatgacaca
ttgcagtggcaggtctggactctgctacctggcttctgcacccgtcccacagatgtgctg
ggggccttcaaggggctggcccgcaccttgggcatggctatcagtgagcgtccagatctc
cgctccactgtgtgccaggctttgcgcaccctcatccacaaaggctgcgagacagatgcg
gagcgagcagaagtgggtcgctttgccaaaaatttcctgcccatcctgttcaacgtgtac
agccaacctgaggaggatgggggtacaagtgctcagcgccgctccgtgctggacactgtc
cgtgcttacctgaccatcacggatcctcagatggtgtgtggattcctggagaaagccagt
gcaaagttgaccagtcctgagagttctgagttcaccagactctctatcctggaccttgta
gtggcaatggcaccctatgctgatgagcagtccctggactccctgtactgtactatccag
ccttctctccagagcaaagaacgcagcatgcagaagaaggcgtatcgtgtgctggaggag
gtgtgtgccgctccccacgctccctgccaggcttttgtccgctcccacctccaggacctg
caggcagcactgctggactcgctcaagagcgcagcatccccggccaagaggccccggctg
aaatgcctgttccacattgtgaagcagctatctgcagagcatgagccttttgtcactgct
ctggtcccagaggtcatcctatgcaccaaggaggtgtcagtgggggcccgcaagaatgcc
ttcatgctgctcgtggagatggggcatgctttcatccgctttggacccacccctgaagag
gctatgcagcggttcctgctcctgatctacgtggggctcactggctcagtcactatgatc
agctgcaccgtgctggcattgacccgcctgttcttcgagttcaaagatcacctggagttc
agtgtggtggagcagctcctgcagaacatctgcctgttgctggcctcccgcacacgggat
gtggtcaaggcagccctgggattcctgaaggtcacactgctcctagtggacaccaagctc
ctggccaagcatgtccagacaatgctggaggctgtggggaacctttcagatgacatgaga
cgccacttccgtatgaagttgcgaaacctcttcatcaagttcatccgcaagtttggcttt
gagctggtgaaggggctgctgccagctgagtaccataaggtgctggtgaacatccgcaag
gcggaatcccggagccgcaagcagcgtgccctgaagaaggcagctgcagatatggatgag
gaggaggcaccagcaccacagcccagaggagacagtatggaagagatcctggctgactca
gaggatgaggaggaggaagaggaggaacagcatcggagcaaggagtggaggaagcaagca
cggcagaagggccaggcgtggctcaaggaaggggaagatgatgagcccctcaacttcctg
gaccctaatgtgtcccagcgggtgctggccacaaaaccagtccccaggcggtccagagga
gtgagccatgatttccagatgtctgaggatggacgcctgatcatccatgaagaggaagag
gagctggatgatgatgatgaaaccaaaggagcagacgaggagatggcagatgtgctgcaa
gatgtggggctccgcagtaagaagagtcagaagcgtcgcttcagagaggagccagacgat
gaggaagctgaggctggaacctattctcagtataaagctggaggctctgggatccatcgg
ccgctgaagaaggagccagccttcggcgcagagtataaatccaagaaaggtaaaggtgac
gtgaagaagaagggccaactcgacccctatgcctacatccccctgaacagagctaaactc
aacaaaaggaagcgggcgaagatgcagggccagttcaaaggcctgatgaagggagcccag
cgtggggccaaggccggccgcaggaaccgtctgaagtcccagcgctcctga
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