Cinclus cinclus (white-throated dipper): 134046202
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Entry
134046202 CDS
T10813
Symbol
VAX1
Name
(RefSeq) ventral anterior homeobox 1
KO
K09318
homeobox protein ventral anterior
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccic03000
]
134046202 (VAX1)
Transcription factors [BR:
ccic03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
134046202 (VAX1)
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Homez
YdaS_toxin
Motif
Other DBs
NCBI-GeneID:
134046202
NCBI-ProteinID:
XP_062352495
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Position
7:6566771..6572155
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AA seq
321 aa
AA seq
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MFGKQDKMDVRCSSETEANRVSKNGHKEGKESKGSEGNISTSFLKDQQGTFSASAATEGC
NKSKSSSADPDYCRRILVRDAKGSIREIILPKGLDLDRPKRTRTSFTAEQLYRLEMEFQR
CQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQGKDSELRSVVSETAATCSVLRL
LEQGRLLSPPGLPGLLPPCATGALGSALRGPGLAAAGSGSAAAAPGGGGGSPHPPAASGA
AGPPPPAALHGAAAAGHGLFGLPVPALLGSVAGRLSSAPLAVAGSLAGNLQELSARYLSS
SAFEPYSRTNNKESAEKKALD
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggaaacaagacaaaatggacgttagatgcagttcagagactgaagctaaccgg
gtctcgaagaacggacataaagagggcaaggaaagcaaagggtctgaaggaaatatttct
acttcttttttgaaggatcagcaagggactttttctgcctctgcagctacggaaggttgt
aataaaagtaaatctagttcggccgatccggactattgcaggaggatcctagttagagat
gccaaaggttcaatccgagagattattctgcctaaggggcttgatctggaccgtcccaag
cggacccgcacctccttcacggccgagcagctctaccgcctggagatggagtttcagcgc
tgccagtacgtcgtggggcgggagcgcaccgagctcgcccgccagctcaatctctccgag
actcaggtcaaggtctggttccagaaccggcgcaccaagcagaagaaggaccagggcaag
gactccgagctgcggtcggtggtgtccgagaccgccgccacctgcagcgtcctgcggctg
ctggaacaaggccggctgctctccccgccggggctgcccggcctcctgccgccctgcgcc
acgggcgcgctgggctcggcgctgcgcgggcccggcctggcggcggcgggcagcggcagc
gcggcggcggctccgggcggcggcggcggctccccgcaccctccggcggccagcggggcg
gccgggccccccccgcccgcggcgctgcacggggcggcggcagcggggcacgggctcttc
gggctgccggtgcccgcgctgctgggctcggtggccggccgcctctcctccgcgcccctg
gccgtagccggctcgctggcgggcaacttgcaggaactgtcggcccgctacctgagctcg
tccgccttcgagccctactcccggaccaacaataaagagagcgctgagaaaaaagcactg
gactga
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