Cinclus cinclus (white-throated dipper): 134046214
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Entry
134046214 CDS
T10813
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccic03016
]
134046214 (TRUB1)
Enzymes [BR:
ccic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
134046214 (TRUB1)
Transfer RNA biogenesis [BR:
ccic03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
134046214 (TRUB1)
Prokaryotic type
134046214 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DMA
Motif
Other DBs
NCBI-GeneID:
134046214
NCBI-ProteinID:
XP_062352519
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All DBs
Position
7:complement(7580811..7607990)
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AA seq
287 aa
AA seq
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MAGEAGGAALGRAADKLFSLSGLFAVRKPKGSTSAAVLNLLKERLLAEAGVQTNGKKRNQ
VLKIGHGGTLDSAATGVLVVGIGKGTKMLGTMLAGSKKYTAIGMLGKATDTLDATGKVTE
EKPYDQVTKGDLENVLQKFTGDIMQVPPLYSALKKNGERLSTLMKRGEAVEAKPARPVRV
YSLSLQQFQPPLFTLGKDVECGGGFYVRSLVNDIGKELSTCATVQELTRTKQGPFTLEEH
ALQEDKWTIDEIAQSLEHCTALFLGEPAQKKLKTEHPGETAVICGDK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggaggcgggcggcgccgcgctgggccgcgcggccgacaagctcttctcgctg
agcgggctcttcgccgtccgcaagcccaagggatccacctcggccgccgtgctcaacctg
ctcaaggagaggctgctggcagaagctggtgtgcaaacaaacgggaagaaaagaaatcag
gtgttgaaaattggacatggaggaactttggacagtgcagccacaggagttctggtggtt
ggtattggaaaaggaacaaaaatgctgggaactatgttggcaggttccaagaagtacact
gccattggaatgctgggcaaggctactgatacattagatgctacaggaaaagtaactgaa
gaaaaaccttatgaccaggtaacaaaaggagatcttgaaaatgttctgcagaagttcaca
ggggacatcatgcaagttcccccactctattctgctttgaagaagaatggagaaaggctt
tcaactctgatgaagagaggggaagcagtggaagcaaagcctgcgcggccagtgagagtg
tacagcctttctctccagcagttccagccaccactgttcacgctgggtaaagatgttgaa
tgtggtggtggcttttatgtcaggagcctggtcaatgacattggcaaagagctttccacc
tgtgccaccgtgcaggagctgacccgcaccaagcaggggccattcacgctggaggagcac
gccctgcaggaagacaagtggacaattgatgaaattgctcagtccttggagcactgcaca
gccctgttcctgggagagccagctcagaaaaaattgaagacagagcatcctggtgaaact
gctgtgatctgtggggataagtga
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