Cinclus cinclus (white-throated dipper): 134046282
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Entry
134046282 CDS
T10813
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
Ubiquitin system [BR:
ccic04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
134046282 (ZSWIM8)
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GFIT
Other DBs
NCBI-GeneID:
134046282
NCBI-ProteinID:
XP_062352599
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Position
7:20541932..20600166
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AA seq
1844 aa
AA seq
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MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKMKG
EITRFHWDALWIRGSCGARVGDGLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRI
AFWSFPENEEDIRLYSCLANGSADEFQRGEQLFRVRAVKDPLQIGFHLSATVVPPQMVPP
KGAYNVAVMFDRCRITSCSCTCGAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQ
RDQLQKFAQYLISELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWY
LDESTLSDNIKKTLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIW
NLLSIVREMFKRRDSNAAPLLEILTDQCLNYEQITGWWYSVRTSASHSSASGHTGRSNGQ
SEVAAHACASMCDEMVVLWRLAVLDPTISPQRRRDLCSQLRQWQLKVIDNVKRGQHKKSL
EKLFQGFKPAVEACYFNWEEAYPIPGITYSSTDKKNSFCWVKAIQQRSCRLQCAESACEA
GRSHGQEPGGPCLQPGDRLRPSPQEPAVRPKELTGKRKVVSETPQRVLRRLSAEGDKAVY
KTAVSKAKLPVSKGLTSKHSGKRRMSSEDSSLEPDLAEMSLDDSSLALGAEASNTFSFAE
SPLSRSYRDAFEEDGGVYFSEGPEPTVRSSSMAKKSPKDPVGEMGSGDDDLPSADENSGG
VSLKPEEVGENGAVGGGDDGEEEDDYQVYYLNPQEVAKEDDDKCEGGIEEEQDIFAGIKP
LEQENRMEILFACAEALYAHGYSNEACRLTVELARDLLANPPDLKVEQPPTKGKKNKVST
SKQTWMATNTLSKAAFLMTVLSERLEYHNLAFRIGMFALELQRPPASTKALEVKLAYQES
EIAALLKKIPLGTNEMNTIRGRAEELREGTLCDYRPVLPLMLASFIFDMLCTPVVSPTGS
RPPSRNWNYEMPGDEELGFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALVLMITYK
DDQSKLKKILDKLLDRESQTHKPQTLSSFYSSSKPTVANQKSPSKHAAQSAAAIQQLPGT
SVTQQAAVSTAVQSSPENFVEKSTQESSQRSPCEPAAEATVLKQEGKVPSRLALGNRGGY
NGRCWGSPVRQKKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWATTSWGRGQDSDSIS
SSSSDSLGSSSSSGSRRASGGARAKTVEVGRYKGRRLESHAPHVPNQPSEAAAHFYFELA
KTVLIKAGGNSSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYS
SHVSWITGQAMEIGSAALNILVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSC
LPHAHALNPNEIQRALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYE
QTVGGTPAQREGATGCSAGGTRAASEAARGLADSRVTSEPTTVTVAAAVTAAATVMPVIS
VGSTMYQQHTVAGPAMAHTHTQGLHPYTTLQTHIPCNPQYIGHTIQHMPRPAVFPVPGSA
YPQGVHPAFIGAQYPYSVTAPSLAATAVSFPGVPVPSMTQIAVHPYHSETGLSLSSNVAL
GSVHAGSTFPAIQGASLTALSSQPSSLVTGGFPAEDEQHSQPVSPQGLHYLHSAYRVGML
ALEMLGRRAHNDHPNNFSRSPPYTEDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQ
EILMEALQRLNPAHVHNHLRTPAFHQLVQRCQQAYMQYIHHRLIHLTPADYDDFVNAIRS
ARSAFCLTPMGMMQFNDILQNLKRSKQTKELWQRVSLEMTTFSP
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgttcgcagagtgggaggacggggagaggttttcatttgaagactcagat
cgctttgaagaagactctctttgttccttcatctctgaggcagagagcctttgccagaac
tggagaggatggaggaaacaatcggctggacccaattcccccactgtcaaaatgaaaggt
gagatcacccggtttcattgggatgctctttggattcgtggaagctgtggggcaagggtg
ggtgatgggctggtgatcccattggtggaactctctgcaaaacaggttgcatttcacatt
ccatttgaggtagtggagaaagtttatcctccagtgcctgaacaactgcaacttcgaatc
gccttctggagttttccagaaaatgaggaggatatcaggttgtactcatgcttggcgaac
ggcagcgcagacgagttccagcgaggggagcagctcttccgggtgagggctgtcaaagac
cctctccagataggtttccatctgagcgccactgtggtgcccccgcagatggtgcccccc
aagggcgcgtacaacgtggcggtgatgtttgaccggtgccggatcacgtcgtgcagctgc
acctgcggcgccggggccaagtggtgcgcgcacgtcgtggcgctctgcctcttccgcatc
cacaatgcatctgcagtgtgcttacgagcacctgtttctgagtctttgtcccggctacaa
agagaccagttgcaaaaatttgctcagtacctaatcagtgaacttccacaacagattctt
ccaacagctcagcgcttgctggatgagttgttatcttcccagtctactgccatcaacaca
gtgtgtggagccccagatcccactgctggaccttctgcatcagatcaaagcacctggtac
ttagatgaatctactctgagtgacaacataaaaaaaacccttcataaattctgtggaccc
tctcctgttgttttcagtgatgtgaattcaatgtatctgtcttccactgagccaccagct
gctgctgagtgggcttgtctgctgcgtcccctgcgaggaagagaacccgagggaatctgg
aacttgctttccatcgtacgggagatgttcaagagacgggatagcaatgcagctccattg
ctggagattctgactgaccagtgtctcaactatgagcagataaccggctggtggtacagt
gtgcgaacatccgcgtcacacagcagtgctagtgggcacacagggcgcagcaatggccag
tcagaggtagctgctcatgcttgtgcaagcatgtgtgatgaaatggtggttctttggagg
ctggctgtccttgacccgactattagtccacagaggcgcagggatctttgctcacagctc
aggcagtggcagctgaaagtcatagataatgttaagaggggtcagcacaaaaaatcactg
gagaagctcttccaaggtttcaagccagctgtagaagcctgttacttcaactgggaggaa
gcttatcccattcctgggattacatacagcagcactgacaagaagaactcgttctgttgg
gtgaaggccatccagcagaggagctgccggttgcagtgtgcagaaagtgcctgtgaggct
ggcaggagccatggccaggagcctgggggaccgtgtctgcagcctggggacaggctgcgg
ccctccccacaggagccagcagttcgtcctaaagaacttactgggaagcggaaagttgtc
tctgaaacaccacagagggttctgagacggctctcagcagaaggggataaagctgtctat
aagactgcagtgagcaaagcaaagttgccagtgagcaaaggcttgaccagtaaacatagt
gggaaacgccgtatgagcagtgaggacagctctctggagccagacttggcagagatgagc
ctggatgacagcagcttggcactgggggcagaagccagcaacacctttagttttgcagaa
agtccactgagcaggagctacagggatgcctttgaggaggatggtggagtgtacttctct
gagggacctgagcccactgtcaggagcagttccatggccaagaaatcccccaaggatcct
gtgggggagatgggtagtggtgatgatgacctgccttccgcagatgagaactctggtggc
gtgagtctgaagccagaagaagtaggagagaatggtgcagtggggggaggggatgatgga
gaagaggaagatgattatcaggtatactatctgaatccacaagaggtagccaaggaagat
gatgacaaatgtgaagggggaattgaagaggagcaggatatatttgctggtataaagcct
ctggagcaggagaaccggatggagatcctgtttgcctgtgcagaggcactgtatgcacat
ggatacagtaatgaggcttgccgcttgactgtagagcttgccagggacctactggccaac
cctccagatctcaaagtggagcagccaccaactaagggcaaaaagaacaaggtgtcaacc
agcaagcagacgtggatggcaaccaacaccttgtctaaagctgctttcttgatgactgtc
ttgagtgagcggctggagtaccacaacctggccttccgaataggaatgtttgctctggag
ctgcagagaccacctgcctctaccaaggctctggaggtgaaattggcttatcaggaatct
gagattgcagccctcttgaagaagattcccttgggcaccaatgagatgaacactattcga
ggaagagctgaagagctgcgagaagggacattgtgtgattaccgtcctgtcctgcctctg
atgttggcaagctttatatttgacatgctgtgcactccagtggtttctcctacaggctct
agacccccaagccgtaattggaattatgaaatgcctggagatgaagagcttggttttgag
gcagctgttgctgctcttggtatgaaaacaactgtcagtgaagcagaacatcctctattg
tgtgaaggcacacgaagggaaaaaggggatttggctctagtcctgatgattacttacaag
gatgatcagtctaagctgaagaagattttagacaaactcctggacagagagagtcaaact
cacaagccacagacgctgagttccttctactcatccagcaagcctacagttgcaaatcag
aaatctccttccaaacatgctgctcagtctgctgcagctatccagcagcttccagggact
tctgtcactcagcaggctgctgtaagcactgcagtccagagcagtcccgagaactttgtg
gagaagagtacacaggagagctctcaaaggtccccctgtgagccagctgcagaggccact
gttctgaaacaagagggaaaggtccccagtcgtctggcccttggaaaccgaggtggatac
aatgggaggtgctggggttcacctgtcaggcagaagaagaaacacacaggtatggctagt
attgacagcagtgctcctgagaccacctctgacagttctccaactctcagtcggcgtccc
ctacgtgggggctgggcaacaacatcctggggtagaggacaggacagtgacagcatcagc
agttcttcaagtgattcactgggatcttcctcttccagtggcagtaggagagccagtggg
ggagctcgtgcaaagactgtggaagttggcaggtataaagggaggcggctggagagccat
gctcctcatgtcccaaaccagccctcagaggcagctgctcatttctactttgagttggcc
aagacagtccttatcaaagcaggtggaaacagcagtacctctatcttcacccacccttcc
tccagtggtgggcaccagggaccacaccgcaaccttcacctctgcgcctttgagattggg
ctgtatgcacttgggctgcacaacttcgtgtctcccaactggctctctcgaacttactcc
tcccatgtctcttggatcacagggcaggccatggagattggtagcgcagccttgaacatc
ttggtggagtgttgggatggacatctgactcccccagaggtggcatcattggcagacaga
gcttcacgggccagagactccaacatggtgcgggcagctgcagaactggcactcagctgc
ttgcctcatgcccatgccctgaacccaaatgagatccagagggctctggtgcagtgtaag
gaacaggacaacctgatgctggaaaaggcctgcatggcagtagaagaggcagccaaagga
ggtggtgtgtacccagaagtcctctttgaagtagctcatcagtggtactggctttacgag
cagactgttggtgggaccccagcccagagagaaggtgccactggctgcagtgccggcggc
acacgggccgcgtctgaagcagcgcgtggcttggcagacagccgggtgacctcagagccc
accacggtgacagtggcagctgcagtaactgcggcagcaactgtcatgccagtgatctcc
gtggggtcaaccatgtatcagcagcacacggtggcagggccagcaatggcacatacacac
acgcagggtctccacccttacaccacccttcaaactcacatcccctgtaatccccagtat
attggacacactatccagcacatgccacgcccagctgtcttcccggtccctggctcggcg
tatccgcagggtgtccatcctgcattcataggggcgcagtacccttactcagtaacagca
ccgtccctggcagctacagcagtgtccttccctggcgtgcccgtcccttccatgacgcag
attgctgtgcatccctaccatagcgagacgggactttcgctgtcttccaatgtagcgcta
ggcagtgtccatgcaggatcaacgttcccagcgattcagggtgcttccttgacagctctg
tcctcacagcccagctcccttgttacagggggttttcctgccgaggatgagcagcacagt
cagcctgtgagcccccagggtctgcactacctccactctgcataccgagttgggatgctg
gctctggagatgcttggccgaagagctcacaacgaccatcccaacaacttctcgcgcagc
ccaccctacactgaggatgtaaaatggctccttgggttagctgcaaagttaggtgtaaac
tacgtgcatcagttttgcgttggtgcggccaagggggtgctgagcccttttgtgctccag
gagatcctcatggaagctctgcagaggctcaaccctgcccatgtgcacaaccacctgcgc
accccagccttccaccagctggtgcagaggtgccagcaggcctatatgcagtacatccat
catcggctgatccatctcactccagctgattacgatgactttgtgaatgccatccgcagc
gccagaagcgccttctgcctgactcccatgggcatgatgcagtttaatgatattctccag
aacctaaagcgcagcaagcagacaaaggagctgtggcaaagggtctctctggaaatgacc
accttctcaccgtga
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integrated database retrieval system
