Cinclus cinclus (white-throated dipper): 134046289
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Entry
134046289 CDS
T10813
Symbol
TDRD1
Name
(RefSeq) LOW QUALITY PROTEIN: tudor domain-containing protein 1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccic03036
]
134046289 (TDRD1)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Gene silencing
piRNA pathway
134046289 (TDRD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
zf-MYND
Agenet
MYND_ZMYND11_ZMYD8
PCB_OB
DUF4537
Tudor_4
zf-C6H2
Motif
Other DBs
NCBI-GeneID:
134046289
NCBI-ProteinID:
XP_062352606
LinkDB
All DBs
Position
7:complement(7985931..8011329)
Genome browser
AA seq
1316 aa
AA seq
DB search
MGKINTQPVKQHNLINTAEKTAPHGESPSPHGGILPPSRPSPAPAAASPRLYRLLTVKRI
SGPAAPPQPAGQRPSRPVQRRRPRPPRSGPSRSPAVPARLEGRRLRTSTHPPSLSARPPS
LQRRPSPGRYSCGRSGGTAAMAGSARRGPAPGRARRADTSTKMAAAGGAGGGGRGRDSPG
RRDRDSPGRRDRDSSAVPAGPALPALPPGTGQGRAGDRGSRRDRQVARDPSGRLPSPPCC
CCRVPTRAARSLRCTDGAKNSERLDIGHRAVLVVHSAPGDIQGGQWEEFLRRKGDETLDG
QPRAVLESPSLEYEKLGDLDRQEEQLVDKQLTVSEQDAAPAKKANRMAAPRLPGRDGRTA
ACERPGSTCPAPPLRAGVPPGRGAMSGTTRRDRLEPSLACGGRCFLCSRRSSSERPALLP
AWGSADGGEAAGGERCSEGREGQGAARVVESAFLVELVCSVTLKTTLLYSQVSHSNWING
KPKKSQYSSKNAFSICYDKSFLSLLVPPPKGGTCHRCGLFGKLRCSQCLQTYYCSADCQK
KDWPAHRVVCEPLKQNLSNSTTKTGVYLKEEVRLSFAVDVVLPDSEDCLNKLPLEMKSHL
TSGSDFKGDSPRESENCSKGSEKNIPEVEDSPHCANSVAKFVSLNIGDEFSGVVSHIQNP
DTFYCQQMQSACQLAELEASVNEYCDKLPNSPSFRPAAGNVCCAQFTEDNLWYRAAVIAY
ASEDTVLVDYMDYGNSDSLPLTRLRPIIPSLMDLPAQAIRCSLAGVKPPLGMWTSEGISY
MKKLVKDKVLTVKVVAKESYRSVVELTDASGTPAVNISSLLIKEGCAAEELSMALPAARG
SDVGQAKEDTRNKRMCKWIKLTLNQTLSVILCTVYNPGEFYCQISNSHELLALNSLNKSL
SEYCQKTPPDVFELENGDPCCAFYSEDGNWYRAVVQSITSDGSVRVSFVDYGNTEEVPLN
NIRQISSSFLELPFQAIKCWLSGIKPGNSKWNPEATRRFHMCTSGLELQATVTSLSEDGA
GVVLTDNSTDCPKIINEILTSEKLVVKEVLQDKNYFPNKSVDQKATSLGHWKSIELAIDE
TMSVWVTEVVSPDLFYAVPVPNKDQKKLHKELISLEDYCRSCNKQPFQPKLGEACCAQFS
GNGNWYRAVVLEASQSAVKVLYGDYGSTETLPLSKVLPITDSYLKLPFQTITCSLAGIKK
AEWSPLVLEKLKKLLLKQYVTITVKGINGNVNLVTVEKHLDNGYVNIADRLLKDGLVTSC
SAENSHSEHQGNGGETNCCCTELKVQLEKHKQVLLFLLNKFGNPDGFTDMKNLLKH
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaatcaacacgcagccagtgaaacagcacaacctcattaataccgcggagaag
acagctccgcacggggagagcccctcgccacacgggggaattctgcctccctcccgtcct
tcccccgcccccgcggccgcatcccccaggctttatcgcctgctgacagtgaagcggatc
agcggccccgcggcccctccccagcccgccgggcagcgcccgtcccgtcccgtccagcgc
cggcgccctcggccgccccgctccggcccctcgaggagcccggcagtgcccgcacggctt
gagggacgccggctccgaacatccacccacccaccctccctatccgcccgcccgccctcg
ctgcagcgcaggccctcacccggtcgctactcgtgcggcaggagcggcggcaccgcggcc
atggccggctcagcgcggcgcggtcccgctcccggccgggcccggcgcgctgacacatca
acaaagatggcggcggcgggcggggccggtggaggtgggcggggccgggacagccccggg
cggcgggatcgggacagccccgggcggcgggatcgggacagctccgcggtgccggcgggg
ccggcgctccctgccctgccgcccgggactggccagggccgagcgggcgatcgcggcagc
cgccgggaccggcaggtggcgcgggacccgtctggccgccttccctcgcccccgtgctgc
tgctgccgcgttcccacccgcgccgcccggagcttgcgatgcactgacggcgctaaaaac
tccgagcggctggatataggacacagggctgtgctggtggtgcactctgcgccaggggac
attcagggtggacagtgggaagaatttctccgcagaaagggtgatgagacactggacgga
cagcccagggcggtgctggagtcaccgtccctggagtatgagaagcttggagacctggat
aggcaggaagagcagctggtagacaagcagctcaccgtgagtgaacaggatgctgctcca
gcaaagaaagccaacaggatggctgcgccgcgcctcccgggtcgcgatggccgcaccgcc
gcctgcgagcggccgggcagcacatgccccgctccgcccctgagggccggggtgccgcca
gggcggggcgcaatgagcggcacaacccgccgggaccggctggagccgtccctggcctgc
gggggccgctgcttcttgtgttcccgacggtcctcgagtgagcggccggccctgcttccc
gcgtggggcagcgcggacggcggggaggcggccgggggtgagcgctgctctgaagggaga
gaggggcagggggcggcccgggttgtcgaaagcgcgtttctggtggagttggtttgcagt
gtcactttgaagactactctgctttattcgcaggtgtcacattctaattggattaatggg
aagccaaagaaatcgcaatattcctctaagaatgctttttctatttgctatgataagagt
ttcttgagtttgttagtaccaccccctaaagggggcacttgccatcgttgtggtctgttt
ggaaagctcagatgttcacagtgtctgcaaacatactattgctctgcagattgtcagaaa
aaggattggccagcacacagagtagtttgtgagccccttaaacagaatttaagtaatagc
acaaccaagacaggagtttatcttaaggaggaagtgaggttgagttttgctgtagatgtt
gttcttccagattctgaagactgcctaaataaacttcccttagaaatgaagtctcattta
acttcaggaagtgatttcaaaggagactctccaagagaatcagaaaactgttcaaaggga
agtgaaaaaaatatacctgaggttgaagactctcctcactgtgctaattcagttgccaag
tttgtctctttaaatattggagatgaattttctggtgtggtttcccacatccaaaatcca
gacaccttttattgtcaacagatgcaaagtgcctgtcaacttgctgagcttgaagcatct
gttaatgaatactgtgacaaacttcccaatagtccatctttccgtcctgctgctggtaat
gtgtgctgtgcccagttcacagaagacaacctttggtatcgtgctgctgttatagcttat
gcttctgaagacactgttttggtggactatatggattatggtaattctgactctcttccg
ctgaccagacttcgtcctataattccaagcttaatggatttgccagctcaagccataaga
tgtagtctggcaggtgtgaagccaccactaggaatgtggacctcagaaggtatttcttac
atgaaaaaactggtgaaagacaaagtgttgacagtaaaagtagtggctaaagagagttac
agatctgtggtggagcttacagatgcatcaggtactccagcagtaaatatatcgagcctt
ctcatcaaggaaggctgtgcagctgaggaactgagcatggccttaccagcagccagaggg
agtgatgttgggcaagccaaggaggacacaaggaacaaaagaatgtgcaagtggattaaa
ttaactcttaaccaaacactcagtgtcatactatgtacagtgtacaatcctggagaattc
tactgtcagatttcaaacagccatgagttacttgctctaaactcacttaacaaatcattg
tctgaatactgtcagaaaacaccaccagatgtttttgagcttgagaatggagacccttgc
tgtgctttttactctgaggatggtaactggtaccgtgctgtggtgcaaagtatcacttca
gatggaagtgttagagtgagctttgtggactatggaaatactgaagaagtgccactgaat
aatatccgacagatctcatcctcattcctagaacttccatttcaagcaattaaatgctgg
ctctcaggtataaagcctggaaatagcaaatggaatccagaagctacaagaagatttcat
atgtgcacttcaggcttagaacttcaagccacagtaacttccctttctgaagatggggca
ggtgtagtgcttactgacaattccacagattgtccaaaaattatcaatgagatactaact
tcagaaaaactggttgtaaaggaagttctacaagataaaaactacttcccaaacaagtct
gttgaccaaaaagcaacctcacttgggcactggaagtcaattgaattggctatagatgaa
accatgtctgtctgggtaacagaagttgtaagcccagacttgttttatgctgtacccgtt
ccaaataaagatcaaaagaagctccacaaggagctgatttcactggaagactattgtaga
tcttgtaacaaacagcccttccagcctaaactgggtgaagcctgttgtgctcagttttca
ggtaatggcaattggtacagagcagttgttctggaagcttcccagtctgcagtgaaagtc
ctgtatggagactatggcagcacagaaactttacccctttcaaaggtgctgccaatcact
gattcctatttaaagctgccttttcagacaattacatgttcacttgcaggaataaagaaa
gctgaatggtctccattagtgcttgagaagttgaaaaaactattattgaagcaatatgtc
acaattacagtgaaagggattaatgggaatgttaatttagtaacagtggagaaacacttg
gacaatggttatgtgaatatagctgacagactgctgaaggatggtttggtcacatcctgc
agtgctgaaaactcgcacagtgaacatcaaggtaatggaggtgagaccaactgctgctgc
acagaattaaaagtgcaacttgaaaagcataagcaagtcctactctttcttctaaacaag
tttgggaatccagatggattcactgatatgaaaaatctgttgaagcactaa
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