KEGG   Cinclus cinclus (white-throated dipper): 134046327
Entry
134046327         CDS       T10813                                 
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
  KO
K05700  vinculin
Organism
ccic  Cinclus cinclus (white-throated dipper)
Pathway
ccic04510  Focal adhesion
ccic04517  IgSF CAM signaling
ccic04518  Integrin signaling
ccic04519  Cadherin signaling
ccic04520  Adherens junction
ccic04810  Regulation of actin cytoskeleton
ccic04820  Cytoskeleton in muscle cells
ccic05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:ccic00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    134046327 (VCL)
   04518 Integrin signaling
    134046327 (VCL)
   04519 Cadherin signaling
    134046327 (VCL)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    134046327 (VCL)
   04520 Adherens junction
    134046327 (VCL)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    134046327 (VCL)
   04810 Regulation of actin cytoskeleton
    134046327 (VCL)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    134046327 (VCL)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ccic04812]
    134046327 (VCL)
   04147 Exosome [BR:ccic04147]
    134046327 (VCL)
Cytoskeleton proteins [BR:ccic04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     134046327 (VCL)
Exosome [BR:ccic04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   134046327 (VCL)
SSDB
Motif
Pfam: Vinculin Talin_IBS2B Spectrin_SYNE1_2
Other DBs
NCBI-GeneID: 134046327
NCBI-ProteinID: XP_062352662
LinkDB
Position
7
AA seq 1136 aa
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVSAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKSQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALALIDSKMNQAKGWLRDPNAPPGDAGEQAIR
QILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQGL
DLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMNEARKVAE
LCEEPKERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAKQIATSLQNLQSKTNRA
VANTRPVKAAVHLEGKIEQAQRWIDNPTVADRGVGQAAIRGLVAEGRRLANVMMGPYRQD
LLAKCDRVDQLSAQLAELAARGEGESPQARAVAAQLQDSLKDLKSRMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPSDAPNRDEVFDERAANFENHAARLGATAEKAAAVGTANKTTVEG
IQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANMQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYKILGAVAKVREAFQPQEP
DFPPPPPDLEHLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEAINQPMMM
AARQLHDEARKWSSKPDVTVINEAAEAGVDVDEEDDADVEFTLPYDTEDDYEPELLLMPT
NQPVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQC
AKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTN
ISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq 3411 nt   +upstreamnt  +downstreamnt
atgcccgtctttcacacgcgcaccatcgagagcatcctggagccggtggcccagcagatc
tcccacctggtcatcatgcacgaggagggggaggtggacggaaaggccatcccggacctc
accgcccccgtgtcggccgtgcaggccgctgtcagcaacctggtgcgggttggaaaagag
actgtgcagacaacagaagaccagatcttgaaaagggatatgccaccagcatttatcaag
gtggagaacgcctgcaccaaactcgttcgggcagcccagatgctgcaagcagatccttac
tcagtaccagctcgtgactatctcattgatggatcaagaggaatcctttctggaacatca
gacttgctcctgacattcgatgaagctgaggtccgtaaaatcatccgtgtctgcaaagga
atattggaatatctgactgtggcagaagtggtggagacaatggaggatctggtgacttac
acgaagaatttagggccaggaatgacaaagatggccaaaatgattgatgagagacaacag
gaattaactcatcaggaacatagggttatgctggtcaactccatgaatacagtgaaggag
ctattgcctgtacttatttcagctatgaagatttttgtaaccacaaaaaattctaaaagc
cagggtatagaagaggccttgaaaaatcgcaatttcacagtagagaaaatgagtgctgag
ataaatgaaataattcgtgtattgcaactcacatcgtgggatgaagatgcctgggcaagc
aaggacactgaagccatgaagagagctttagccttaatagattccaagatgaatcaggcg
aaaggttggctgagagatccaaatgcacctccaggggatgctggtgagcaggccataagg
cagatccttgatgaagctggcaaagcaggagagctgtgtgcaggcaaagagcgcagagag
atcctgggcacgtgcaaaaccctggggcagatgactgatcagctggctgacctccgggct
agaggacagggtgctacacccatggctatgcagaaagcccagcaggtgtcccagggcctg
gacttgctcactgccaaagtggagaatgcagcccgcaagctggaggccatgaccaactcc
aagcaggccattgctaagaagattgatgctgcacagaattggcttgcagatcctaacggg
ggcagtgaaggagaagagcatattcggggaattatgaatgaagcaaggaaagttgcagaa
ctatgtgaagagcctaaagaaagagatgatatccttcgttccttgggggaaatctctgct
ttgactgccaagctttcagatctccgacgacatgggaaaggtgactctcccgaggcccgt
gcattggctaagcaaatagctacgtcacttcagaatttacagtccaaaacaaacagggct
gtagcaaatacaaggccagttaaagcagctgtccatttggagggcaagatagaacaagct
caaaggtggatagacaatcctacagttgctgatcggggagtaggccaggctgccatccga
gggctggtcgccgaaggccggcgtttggccaacgtcatgatgggcccgtaccggcaggac
ctgctggccaagtgtgaccgcgtggaccagctctctgcccagctggctgagctggccgct
cgaggggagggcgaatccccccaggcccgggccgttgctgctcagctccaggactcactg
aaggatcttaaatcacggatgcaagaagcaatgacccaggaagtttctgatgtttttagt
gacaccacaactcctattaagttgttagcagtagcagccactgctccctctgatgctccc
aatagagatgaggtgtttgatgaaagagcagcaaactttgaaaaccatgctgctagactg
ggagctacagcagaaaaagcagctgcagttggaactgccaataaaactactgtggagggc
attcaggcaacagtgaaatcagcaagggaactcaccccacaggtagtatcagcagctcgc
atcctcctgagaaaccctggaaatcaagctgcttatgaacattttgagaccatgaaaaac
cagtggattgataatgtagaaaaaatgacagggttggtggatgaagccattgatactaaa
tctctgttggatgcatcagaagaggccattaaaaaggacctggataaatgtaaagttgca
atggccaacatgcaacctcagatgctggtagctggtgccaccagcattgccagacgagca
aaccgcatcctgctggttgcaaaacgggaggtggaaaattcagaagaccctaaatttcgg
gaggctgttaaagcagcctctgatgagctgagcaaaactatatcacccatggtaatggat
gctaaagctgtggcaggcaacatttctgatcctggtttgcagaagagtttcttggattct
ggatacaaaattctaggagctgtggccaaagtcagagaagccttccagcctcaggaacct
gattttcctcctcctcctcctgaccttgagcaccttcatctgactgatgagctcgctcct
ccaaaaccaccgctgccagagggtgaggttcccccacccagaccaccaccacctgaagaa
aaggatgaagagttcccagagcaaaaggcaggagaagcaatcaatcagcccatgatgatg
gctgctagacagttgcatgatgaagcccggaaatggtcgagcaagcctgatgtgactgtg
attaacgaagcggctgaggctggtgtagatgtagatgaggaggatgatgcagatgttgaa
ttcactctcccctatgacactgaagatgattacgagcctgagctgctgttaatgccaacc
aatcagcccgttaaccagcccattctggctgctgctcagtctctacatcgggaagcaacc
aagtggtctagtaagggcaacgacatcatcgcggcggcgaagcgcatggcgctgctcatg
gcagagatgtcgcgcctggtcaggggcggcagcggcaacaagcgcgccctcatccagtgc
gccaaggacatcgccaaggcgtccgacgaggtcacccggctcgccaaggaggtggccaag
cagtgcacggacaagcgcatcagaacaaacctcctgcaggtctgtgagcgaatcccaacc
atcagtacacagctgaaaattctctccactgtcaaagctaccatgttgggcagaactaat
atcagtgatgaagagtcggaacaggcaaccgagatgttggttcataatgcccagaacctc
atgcagtctgtgaaggagactgtgagagaagctgaagcagcatccattaagatcagaaca
gatgctggattcactcttcgctgggtcagaaagaccccatggtatcagtaa

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