Cinclus cinclus (white-throated dipper): 134046327
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Entry
134046327 CDS
T10813
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04510
Focal adhesion
ccic04520
Adherens junction
ccic04810
Regulation of actin cytoskeleton
ccic04820
Cytoskeleton in muscle cells
ccic05100
Bacterial invasion of epithelial cells
Brite
Cytoskeleton proteins [BR:
ccic04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
134046327 (VCL)
Exosome [BR:
ccic04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134046327 (VCL)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134046327
NCBI-ProteinID:
XP_062352662
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Position
7:20988918..21053551
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AA seq
1136 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVSAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKSQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALALIDSKMNQAKGWLRDPNAPPGDAGEQAIR
QILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQGL
DLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMNEARKVAE
LCEEPKERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAKQIATSLQNLQSKTNRA
VANTRPVKAAVHLEGKIEQAQRWIDNPTVADRGVGQAAIRGLVAEGRRLANVMMGPYRQD
LLAKCDRVDQLSAQLAELAARGEGESPQARAVAAQLQDSLKDLKSRMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPSDAPNRDEVFDERAANFENHAARLGATAEKAAAVGTANKTTVEG
IQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANMQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYKILGAVAKVREAFQPQEP
DFPPPPPDLEHLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEAINQPMMM
AARQLHDEARKWSSKPDVTVINEAAEAGVDVDEEDDADVEFTLPYDTEDDYEPELLLMPT
NQPVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQC
AKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTN
ISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtctttcacacgcgcaccatcgagagcatcctggagccggtggcccagcagatc
tcccacctggtcatcatgcacgaggagggggaggtggacggaaaggccatcccggacctc
accgcccccgtgtcggccgtgcaggccgctgtcagcaacctggtgcgggttggaaaagag
actgtgcagacaacagaagaccagatcttgaaaagggatatgccaccagcatttatcaag
gtggagaacgcctgcaccaaactcgttcgggcagcccagatgctgcaagcagatccttac
tcagtaccagctcgtgactatctcattgatggatcaagaggaatcctttctggaacatca
gacttgctcctgacattcgatgaagctgaggtccgtaaaatcatccgtgtctgcaaagga
atattggaatatctgactgtggcagaagtggtggagacaatggaggatctggtgacttac
acgaagaatttagggccaggaatgacaaagatggccaaaatgattgatgagagacaacag
gaattaactcatcaggaacatagggttatgctggtcaactccatgaatacagtgaaggag
ctattgcctgtacttatttcagctatgaagatttttgtaaccacaaaaaattctaaaagc
cagggtatagaagaggccttgaaaaatcgcaatttcacagtagagaaaatgagtgctgag
ataaatgaaataattcgtgtattgcaactcacatcgtgggatgaagatgcctgggcaagc
aaggacactgaagccatgaagagagctttagccttaatagattccaagatgaatcaggcg
aaaggttggctgagagatccaaatgcacctccaggggatgctggtgagcaggccataagg
cagatccttgatgaagctggcaaagcaggagagctgtgtgcaggcaaagagcgcagagag
atcctgggcacgtgcaaaaccctggggcagatgactgatcagctggctgacctccgggct
agaggacagggtgctacacccatggctatgcagaaagcccagcaggtgtcccagggcctg
gacttgctcactgccaaagtggagaatgcagcccgcaagctggaggccatgaccaactcc
aagcaggccattgctaagaagattgatgctgcacagaattggcttgcagatcctaacggg
ggcagtgaaggagaagagcatattcggggaattatgaatgaagcaaggaaagttgcagaa
ctatgtgaagagcctaaagaaagagatgatatccttcgttccttgggggaaatctctgct
ttgactgccaagctttcagatctccgacgacatgggaaaggtgactctcccgaggcccgt
gcattggctaagcaaatagctacgtcacttcagaatttacagtccaaaacaaacagggct
gtagcaaatacaaggccagttaaagcagctgtccatttggagggcaagatagaacaagct
caaaggtggatagacaatcctacagttgctgatcggggagtaggccaggctgccatccga
gggctggtcgccgaaggccggcgtttggccaacgtcatgatgggcccgtaccggcaggac
ctgctggccaagtgtgaccgcgtggaccagctctctgcccagctggctgagctggccgct
cgaggggagggcgaatccccccaggcccgggccgttgctgctcagctccaggactcactg
aaggatcttaaatcacggatgcaagaagcaatgacccaggaagtttctgatgtttttagt
gacaccacaactcctattaagttgttagcagtagcagccactgctccctctgatgctccc
aatagagatgaggtgtttgatgaaagagcagcaaactttgaaaaccatgctgctagactg
ggagctacagcagaaaaagcagctgcagttggaactgccaataaaactactgtggagggc
attcaggcaacagtgaaatcagcaagggaactcaccccacaggtagtatcagcagctcgc
atcctcctgagaaaccctggaaatcaagctgcttatgaacattttgagaccatgaaaaac
cagtggattgataatgtagaaaaaatgacagggttggtggatgaagccattgatactaaa
tctctgttggatgcatcagaagaggccattaaaaaggacctggataaatgtaaagttgca
atggccaacatgcaacctcagatgctggtagctggtgccaccagcattgccagacgagca
aaccgcatcctgctggttgcaaaacgggaggtggaaaattcagaagaccctaaatttcgg
gaggctgttaaagcagcctctgatgagctgagcaaaactatatcacccatggtaatggat
gctaaagctgtggcaggcaacatttctgatcctggtttgcagaagagtttcttggattct
ggatacaaaattctaggagctgtggccaaagtcagagaagccttccagcctcaggaacct
gattttcctcctcctcctcctgaccttgagcaccttcatctgactgatgagctcgctcct
ccaaaaccaccgctgccagagggtgaggttcccccacccagaccaccaccacctgaagaa
aaggatgaagagttcccagagcaaaaggcaggagaagcaatcaatcagcccatgatgatg
gctgctagacagttgcatgatgaagcccggaaatggtcgagcaagcctgatgtgactgtg
attaacgaagcggctgaggctggtgtagatgtagatgaggaggatgatgcagatgttgaa
ttcactctcccctatgacactgaagatgattacgagcctgagctgctgttaatgccaacc
aatcagcccgttaaccagcccattctggctgctgctcagtctctacatcgggaagcaacc
aagtggtctagtaagggcaacgacatcatcgcggcggcgaagcgcatggcgctgctcatg
gcagagatgtcgcgcctggtcaggggcggcagcggcaacaagcgcgccctcatccagtgc
gccaaggacatcgccaaggcgtccgacgaggtcacccggctcgccaaggaggtggccaag
cagtgcacggacaagcgcatcagaacaaacctcctgcaggtctgtgagcgaatcccaacc
atcagtacacagctgaaaattctctccactgtcaaagctaccatgttgggcagaactaat
atcagtgatgaagagtcggaacaggcaaccgagatgttggttcataatgcccagaacctc
atgcagtctgtgaaggagactgtgagagaagctgaagcagcatccattaagatcagaaca
gatgctggattcactcttcgctgggtcagaaagaccccatggtatcagtaa
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