Cinclus cinclus (white-throated dipper): 134046343
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Entry
134046343 CDS
T10813
Symbol
GBF1
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134046343 (GBF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134046343 (GBF1)
Membrane trafficking [BR:
ccic04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
134046343 (GBF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
DUF1045
DUF758
Motif
Other DBs
NCBI-GeneID:
134046343
NCBI-ProteinID:
XP_062352700
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All DBs
Position
7:complement(19488938..19591317)
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AA seq
1900 aa
AA seq
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MRGIVRMVDKNIYIVQGEINAVVGAIKRNARWSTHTHLDEERDPLLHSFSHLKEVLNNLT
ELSEIEPNVFLRPFLEVIRSEDTTGPITGLALTSVNKFLSYALIDPSHEGTAEGMENMAD
AVTHARFVGTDHASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLS
ELLRKSAEHTLVDMVQLLFTRLPQFKEEPKSYMGTNMKKISSGLLNKLELSSGEQPKALN
QLERVLIFKNLKLKMRAGGMSESSKWKKQKRSPRPPRHITKVPPGTEQSVGNATNTTTSG
VAFIDAPSPSSSGSSENVSSVVSPVTDSGLELSSQTTSKEDLTDLDQVTSLGLNAGSPSN
EAKVTENQNQPELQNESLREEKVQSASVESIPEVLEECTSVTEHSDSASVHDMDYVNPRG
VRFTQSSQKEGAALVPYGLPCIRELFRFLISLTNPHDRHNSEVMIHMGLQLLTVALESAP
IANCQSLLGLVKEELCRHLFQLLSVERLNLYAASLRVCFLLFESMREHLKFQLEMYIKKL
MDIITVENPKMPYEMKEMALEAIVQLWRIPSFVTELYINYDCDYYCANLFEELTKLLSKN
AFPVSGQLYTVHLLSLEALLTVIDSTEAHCQAKVLSNIHQQEKEVVKPSPETINSTKETS
NNIERVFSEGKSLSAVSEPAGACPPTSGCLMADQMKESCMELEGGSEAAEKSIPRKPTRF
SCILPSPQELMQIKNKKKLLITGTEQFNQKPKKGIQFLQEKNLLATPIDNNEVAKWLREN
PRLDKKMIGEFVSDRKNIDLLESFVGTFSFQGLRLDEALRLYLEAFRLPGEAPVIQRLLE
AFTEHWRKSNGSPFANSDACFALAYAVIMLNTDQHNHNVRKQNVPMTLEEFRKNLKGVNG
GKDFEQDILEDMYHAIKNDEIVMPEEQTGLVKENYIWNVLLHRGATDEGIFLHVPPGTYD
HDLFTMTWGPTIAALSYVFDKSLEETIIQKAISGFRKCAMISAHYGLSDVFDNLIISLCK
FTALSSESIENLPTVFGSNPKAHIAAKTVFHLAHRHGDILREGWKNIMEAMLQLFRAELL
PKAMVEVEDFVDPNGKIYLQREETPSNRGESTVLSFVSWLTLSGTEQSGMRGPSTETQEA
KRAALECIKQCDPEKLITESKFLQLESLQELMKALISVTPDEETYDEEDAAFCLEMLLRI
VLENRDRVTCVWQTVRDHLYHLCVHAMEFCFLVERAVVGLLRLAIRLLRRDEISAQVLLS
LRILLMMKPNVLSRVSHEVAYGLHELLKTNAANIHSGDDWYTLFTLLECIGSGVKPPAAL
QVTARADNDTGAQSDSEVSSSYHPSDMSLDRGYTSDSEVYTDHGKPGKMHRSVTDVDVMN
SGWLVVGKDDIDNSRSSAGLSRLGPSPLVNQYSLTVGLDLGPHDTKSLMKCVESLSFIVR
DAAHVTPENFELCVKTIRIFVEASLNGGYKSQEKRGKSHRYDSKSSRLKKKPKDSSTRRS
RVLSQHQAHTHSDEDEDESIPASYHTVSLQVSQDLLDLMHTLHTRAAGIYSSWAEEQRHL
ETAARKITADSRTLWSNCWCPLLQGIAWLCCDARRQIRMQALTYLQRALLVHDLQALDAL
EWESCFNKVLFPLLTKLLENISPADVGGMEETRMRASTLLSKVFLQHLSPLLSLTTFAAL
WLTILDFMDKYMHAGSSDLLLEAIPESLKNMLLVMDTAGIFHSADSRTGYSDLWEITWER
IDCFLPRLRDELFKQTVIQDPVPSVPVEQQHQKTIASALPPSPVGDVRPSTHVAPSEKPC
ELGVSESERATAPASPTISTSASPSFPASASTKSSPVTDIPPTTAQPPLILQPLASPLQV
GVPPMTLPIILNPALIEATSPVPLLATPRPTDPMTSSEVN
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atgcggggaattgtcaggatggtggataagaacatttacattgtgcaaggtgaaatcaat
gcagtggtgggagccataaagcgtaatgcccgatggagcactcacacacatctggatgaa
gaaagggatcccctgctgcatagctttagccacctaaaagaagtactgaataacttaaca
gagctatctgaaattgaacccaatgtctttcttcggccttttctggaagtaatccgttct
gaagacactacaggccctataactggattggcactcacctctgtgaataaattcctctca
tatgcactaatagatcccagccatgagggcacagcagaggggatggagaacatggcagat
gctgtcactcacgctcgatttgtgggtacagatcatgcgagcgatgaggttgtcttgatg
aaaatcctacaggtgttgaggacgttgctgctcaccccagtgggagcccacctcaccaat
gaatcggtgtgtgagatcatgcagtcctgtttccgcatatgcttcgaaatgaggctcagt
gagttattgagaaaatctgcagagcacactctggtcgacatggtgcagctgctcttcaca
aggttgcctcagtttaaagaagagcctaaaagctacatgggaacgaacatgaagaagatt
tcttcaggtctcctcaacaaactggagctaagtagtggggaacagcccaaagccctgaac
caattagagagggtattgatctttaagaacctgaagttgaaaatgagagctggaggaatg
agtgaatcatcaaaatggaaaaagcagaagagatcacctaggcctcctcgacacataact
aaggtccctcctgggacagaacagtcagtaggcaatgctactaataccacaacaagcgga
gttgctttcatagatgctccttctcccagctcctctgggagctcagaaaatgtttcatca
gtggtcagccctgtgacagacagtgggttggagttgtcctcacagacaacatctaaggaa
gacctgacagatttggaccaagtcacttctttgggacttaatgcaggatcaccttcaaat
gaggccaaagtcactgaaaatcaaaatcagcctgaactccagaatgaaagtctgagggag
gagaaggtccagtcagcttctgtcgagtctatccctgaggtgctagaggagtgcacatct
gtaacagaacattctgactctgcctcagttcatgacatggactatgtaaatccccgggga
gtacgtttcactcagtcttcccaaaaagaaggagcagctctggtcccgtatgggttgcca
tgtattagagaactgttccgctttctcatctcgctcaccaaccctcatgaccgccacaac
tctgaggtgatgatccacatgggactgcagctgctgactgttgccctggagtcagcaccc
attgcaaactgtcagtccctcttgggacttgtgaaggaggagttgtgccggcacctattt
caactactgagtgttgaacggctcaatctgtatgcagcctccctcagggtgtgctttcta
ctctttgagagcatgagagagcatctgaaattccagctggagatgtatatcaagaagctg
atggacataatcactgtggagaacccaaagatgccctatgaaatgaaggagatggctttg
gaagccattgttcagctgtggaggattcccagttttgtgaccgagctgtacattaactac
gactgtgactactactgtgccaacctcttcgaggagctcaccaagctgctgtccaagaat
gcctttccagtctctggacagctgtatactgtccatctgctgtctctggaagcattgctg
acagtgatagatagcactgaggcacattgccaggccaaagtgctgagtaatatacatcaa
caagagaaggaagttgtcaaaccaagcccagaaaccatcaacagtaccaaagaaacaagc
aataatattgagagagtattcagtgagggaaaatctttgagtgctgtctcagagccagct
ggggcatgtcctcctaccagtggatgccttatggctgaccagatgaaggagagctgcatg
gaattggaaggaggaagtgaagcagctgagaagagtatccccaggaaacctactcgattt
tcttgtatccttccaagtcctcaggaacttatgcagattaagaacaagaagaagctcctg
ataaccggcacagagcagttcaaccaaaagccaaagaaagggatacaatttctgcaggag
aaaaaccttcttgccactcccattgacaacaatgaagtggccaagtggttacgggaaaat
cctcggctggacaaaaagatgattggggaatttgtgagtgaccgtaagaacatagacttg
ctggaaagctttgttggtactttcagcttccaaggtttaaggctggatgaagctttacga
ctctatctagaggcctttagattaccaggagaggcacctgtaattcagagactgttagaa
gccttcacagaacattggaggaaatcaaacgggtctccatttgctaatagtgatgcctgc
tttgccttggcctatgcagttattatgctgaacactgaccagcacaaccacaatgtccgc
aagcagaatgtcccaatgactctggaggagtttcggaagaacctgaaaggtgtgaatgga
ggcaaagactttgaacaggacattctggaagacatgtatcatgccatcaaaaatgatgag
atagtgatgccagaagagcagacaggtttggtgaaggaaaactatatctggaatgtcctg
ttgcatcgtggtgccactgatgagggaatattcctccatgtgcctcctggaacctatgac
catgaccttttcaccatgacatgggggcccactatcgcagcactttcttatgtttttgac
aagagcttagaggaaacaataatccagaaggctatctctggtttcaggaaatgtgcaatg
atttctgctcactatggccttagtgatgtatttgacaatctcataatttctctctgcaag
tttacagctctcagcagtgagtctattgagaacctgcccactgtttttggaagtaatccc
aaggcccatattgcagcaaagacagtgtttcacttggcccatcgccacggtgacattctg
cgagagggctggaaaaacatcatggaggccatgctacagcttttccgagcagagctgctg
cccaaggccatggtggaggttgaagactttgtggatcctaatggcaaaatctatctgcag
cgtgaggagacaccatccaaccgtggtgaatcaacagtattgagttttgttagctggctc
accctcagtgggacagagcaatctggtatgagagggccatctacagaaacacaggaggca
aagcgagcggctttggaatgcataaagcaatgtgatcctgagaaattgatcacagaaagc
aagtttctccaacttgaatccctccaggagctcatgaaggctctaatctctgtaactcct
gatgaggagacatatgatgaagaagatgcagccttctgcttggagatgcttctgcggatt
gttctagagaacagggaccgtgtgacctgtgtctggcaaactgtccgagaccacctttat
catctgtgtgtccatgcaatggagttctgcttcttggtggagagggcagtggtgggcctg
ctcagactggccattcggctactccgtcgagatgagatcagtgcacaggttcttctctca
ttacgtatcttacttatgatgaagccaaatgtgctgtccagagttagccatgaagttgcc
tatggcctccatgagctcctgaagaccaatgctgccaacattcactctggggatgactgg
tacacactcttcaccctcctggagtgcatcgggtctggggtgaagccgcccgcagctctg
caggttacagcaagggcagataacgacacaggtgctcaatcagacagtgaggtgtcttcc
tcctatcatccaagtgacatgagcctggaccgtggctacacctctgactctgaggtgtac
acagatcatgggaagccaggcaagatgcatcgctcagtcacagatgtggatgtcatgaac
agtggctggcttgtggtcgggaaggatgacatcgacaactccagatcctctgctgggctc
agcaggctgggtccatcacctctcgtcaaccagtacagcctgacagtagggctggatttg
ggcccacatgacacaaagtctctcatgaaatgtgtcgagtctctgtccttcatcgtgcga
gatgctgcccatgttacacctgagaactttgagctctgtgtcaaaacaatacgtatcttc
gtggaggccagcttaaatgggggctacaagtcccaggagaagaggggaaagagccacagg
tatgacagtaaatccagccggttaaaaaaaaagccaaaagacagctccacacggcgatcc
cgggtcttgagccagcaccaggcgcacacacacagtgatgaggatgaggacgagagcatc
cctgccagctaccacactgtgtctttacaggttagtcaggacctcctggacctcatgcac
accttgcacacacgagcagctggtatctacagctcctgggcagaggagcagcgacacctg
gagacagcagccaggaaaatcacagcggattcccgaacactgtggtccaactgctggtgt
cctctgctacagggtattgcctggctgtgctgtgatgcccgacgccagatacggatgcaa
gcgctcacttacttgcagcgagccctcctggtacatgacctgcaggccctggatgccctg
gaatgggagtcctgcttcaacaaggtgttgttccctctgctaaccaagctacttgagaac
atcagcccagctgatgttggtgggatggaagaaactaggatgagagcctcaacactactc
tccaaggtgttcctacagcatctctccccactgctctcactgaccacctttgctgccctg
tggctcacaatcctggacttcatggacaaatacatgcatgctggctccagtgacttactg
ctggaggccattccagaatctctgaagaacatgctgctcgtaatggatacagctgggata
ttccacagtgctgactcacggacaggatactcagatctctgggagatcacctgggagcgc
attgactgtttcttacctcggctgcgggatgagctcttcaaacagacagtcatccaagat
ccagttcccagtgtaccagtggagcagcagcatcagaaaacaatagcgtctgccctgccg
ccttctcctgtaggggatgtgagaccatccacccatgtggctccttcagagaagccttgt
gaactaggtgtcagtgagtctgagagagccactgcacctgcctcacccaccatcagcacc
tctgcttctccttccttcccagcatcagcttcaacaaagtcaagccccgttacagacata
cctcctacgacagcacagccgccgctcatcctgcagcctcttgcctctccgctgcaggtt
ggggtgccacctatgactcttccaatcattctcaacccagccctaattgaagccacctct
cctgttcccctcttagctactccacggcccactgaccctatgacgagctctgaagtcaat
tag
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