Cinclus cinclus (white-throated dipper): 134046347
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Entry
134046347 CDS
T10813
Symbol
PAX2
Name
(RefSeq) paired box protein Pax-2 isoform X1
KO
K15608
paired box protein 2
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccic03000
]
134046347 (PAX2)
04131 Membrane trafficking [BR:
ccic04131
]
134046347 (PAX2)
03036 Chromosome and associated proteins [BR:
ccic03036
]
134046347 (PAX2)
Transcription factors [BR:
ccic03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
134046347 (PAX2)
Membrane trafficking [BR:
ccic04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
134046347 (PAX2)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
134046347 (PAX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
Homeodomain
DUF6115
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
134046347
NCBI-ProteinID:
XP_062352705
LinkDB
All DBs
Position
7:19204687..19289578
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AA seq
409 aa
AA seq
DB search
MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLA
EGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGSGTGVTAPGHTIVPSTASPPVSSASND
PVGSYSINGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSSVDSLRKHLRGDTFTQQQLEA
LDRVFERPSYPDVFQTSEHIKSEQGNEYSLPALTPGLDEVKSSLSTSANPDLGTNVSGPQ
TYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTTYNEA
WRFSNPALLMPHPGAPHLPLLPLPMTATSYHGNHMKLQGDSLGLHIVPV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggatatgcactgcaaagcagaccccttctcagcaatgcacccagggcacgggggtgtg
aaccagctcgggggggtgtttgtgaacggcaggcccctacctgatgtggtgagacaaagg
atagtggagctggctcaccagggggtgcgaccctgtgacatttccaggcagctgcgggtc
agccacggttgtgtcagcaagattttgggcaggtattacgagacgggaagcatcaagccc
ggcgtgatcggaggctccaaacccaaagtggccaccccaaaagtagtggataaaatcgcc
gagtacaagagacaaaacccgacaatgttcgcctgggaaatccgggacaggctattggcc
gagggaatctgcgacaacgacacggtccccagcgtctcttccataaacaggatcatcaga
accaaagttcagcaaccttttcacccaacaccagacgggagtgggacaggtgtgactgca
ccaggacatactattgtgcccagcacagcatcccctcctgtctccagtgcctccaatgat
ccagtgggctcttactccattaacgggatcctggggattcctcggtcgaatggcgagaag
aggaaacgtgatgaagatgtatccgagggctcagttcccaatggagattcccagagcagc
gtggacagtttgcggaagcaccttcgtggcgacactttcacccagcagcagctggaagct
ttagatcgagtttttgagcgtccttcttaccctgacgtctttcaaacatcagagcacatc
aaatctgagcagggtaatgagtactccctcccagctctgacccctggtctcgatgaagtc
aaatcaagtctatccacctctgctaacccagacctggggacaaatgtgtcaggaccccag
acgtaccctgtggtgaccggtcgtgatatggcaagcacaaccttgcctggctacccacct
catgttcccccaactggacaaggcagctacccaacatcaactcttgcaggaatggttcct
gggagcgagttctcagggaacccctatagccaccctcagtacacaacctacaacgaggcc
tggcggttcagcaaccctgcattactaatgccacatcccggggctccgcacctcccactg
ctgccgctgcctatgaccgccactagttaccatggaaaccacatgaaactgcagggcgac
agcttaggcctccacattgtacctgtctga
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