Cinclus cinclus (white-throated dipper): 134046377
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Entry
134046377 CDS
T10813
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccic03036
]
134046377 (MMS19)
03400 DNA repair and recombination proteins [BR:
ccic03400
]
134046377 (MMS19)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
134046377 (MMS19)
DNA repair and recombination proteins [BR:
ccic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
134046377 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_ECM29
DUF7574
RP-C
Motif
Other DBs
NCBI-GeneID:
134046377
NCBI-ProteinID:
XP_062352752
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All DBs
Position
7:complement(13864770..13879621)
Genome browser
AA seq
1024 aa
AA seq
DB search
MAAAGTETGTEVLAAFVRDFVSGQQDGRAAEVAAGVKDGRWTVLQLVEALGFCLENTDPR
TRGRGIQLLSQVLLQCYSLLQEKEVLHLVLFYESRLQDHHLVIPSVLQGLRALSMCEVLS
PGLAVSVLKAIFQEVHVQSLMQLDRHTVYSIITNFMSTREEELKGLGANFTFGFIQVMDG
EKDPRNLLVAFQIVRDLIAKDYALGPFVEELFEVTSCYFPVDFTPPPNDPHGIQREDLIL
SLRAVLASTPQFAEFLLPLLIEKLDSELQSAKLDSLQTLTACCAIYGQKELQEFLPSLWS
SLRREVFQTASEKIEMECLAALHALSACLSRSVLSSDSEDLLDSFLSSILQDCRHHLCEP
DMKLVWPSAKLLQAAAGASLRTYHRITRSVLPLLLEQYTKHMQSSQRRTILEMLLGFLEL
QQKWGHVEEDESTLLSLQAPVCSVVFSALLDPSVQLQLVGIKALTILGSLQGFLSSSDLE
LVVDHLIRLALHEEDSQSSEAAMEAAGSLAPTYPKVFSGCMVPRLEEELQSEREENYHNH
HSLQQRCLQALAAVSTHTSIVKETVPVLLQHLQKVQKGTEARNTQDMVSVCQSLHRVALQ
CQQDAEGCWYFHQTVVPCLLAVAVQAAMPESTHTLPAKTLLEEEVLAAMIPVISAATTHL
SPELAAQSVSHVVPLFLDGEVSFLPQNSFPCSFQPFGDGECLEAQRCLVALLMAFVCSLP
RNVAIPQQERLLRELLALGCSCNCPFTATTAAKCFAGLVNKHPAGQQLTEILQLAVNRME
ASLTEGPRRMQALTLLLWVTKALVLRYHPLSSCLTDKLLGLLGDTELGPAAADGFSLLMA
ESPDVLHKGCHADVRIMFRQRFFTDNVPKLVQGFHGAGPDVKANYLKSLSHVLNHLPKPV
LVTELPTLLSLLLEALSCSDRVVQLSTLSCLHPLLLEAPQIMSLHVDTLVTKFLNLTSSP
TMAVRIAALRCAHALTSLPTTVLLPYKGRVIRALAKPLDDKKRLVRKEAVAARGEWFLLG
SPGR
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgggacggagaccgggacggaggttcttgccgccttcgtccgggacttc
gtgtccgggcagcaggacggccgcgccgcggaggtggcagcaggggtgaaagatggaagg
tggacagtactgcagcttgtggaagccctggggttttgtctggagaacacagatcctcgg
acacgagggcgaggcatccagctgttgtcacaagtcctgctccagtgctactccctgctc
caggagaaggaagtgctgcatctggtcctattctatgagagccggctgcaagatcatcac
ctggtgattccctctgtgctccagggactccgagcactgagcatgtgtgaggtgctgtct
ccagggctagcagtgtctgtgctcaaagccatcttccaagaggtgcatgtgcagtccttg
atgcagctggaccgccacacagtctacagcatcatcaccaacttcatgagcaccagggag
gaagagctgaaaggcctgggtgccaacttcaccttcggcttcatccaggtcatggatggg
gagaaggatccccgcaatctgctggtggccttccagattgtgcgtgatctcattgccaag
gactatgccctgggtccctttgtggaagagctgtttgaagttacatcctgctacttccct
gttgattttactccaccccccaatgatcctcatggcatccagagggaagacctgatcctg
agcctccgggctgtactggcctccacaccccaatttgctgagttccttctccctctcctt
attgagaagttggactcagaactgcagagtgccaagcttgactcgctgcaaactctgact
gcctgctgtgccatctacgggcagaaggagctgcaggaattccttcccagcctctggtca
tccctgcgcagagaggtgttccagacggcgagtgagaagattgagatggaatgcctggct
gccctgcatgctctctctgcctgcctctcccgctccgtgctcagctctgattctgaggat
ctgctggattccttcctcagcagcatcctgcaagattgcaggcaccatctgtgtgagccc
gacatgaagctggtgtggcccagtgccaaactcttgcaggcagcagcaggtgcctcgctc
cgcacctaccaccgcatcacccgcagcgtcctgcccctgctgctggagcaatacaccaag
cacatgcagagcagccagaggagaacaatcctggaaatgctgctaggcttcctggagttg
cagcagaagtggggacatgtggaagaagatgagagcactctgctgtcactccaagctcca
gtttgctctgtggtgttctcggcgctgctggatcccagtgtgcagctgcagctggttggg
atcaaggcactgactatcctgggctccctgcaaggtttcctgtcttcctctgatctggag
ctggttgtggatcacttaatccgtcttgctcttcatgaggaggattcccagagcagtgaa
gcagcaatggaagcagctgggtccctggcccccacctacccaaaggttttctctggatgc
atggtacccaggcttgaagaggagctgcagtcagagcgggaggagaactaccacaaccac
cactccttgcaacagcgctgcctgcaggccctggcagctgtgtccacccacaccagcatc
gtgaaggagactgtccctgttctgctacagcatctccagaaggtgcagaaagggaccgag
gccaggaacacccaagacatggtctctgtgtgccagagcctgcaccgtgtggccctgcag
tgccaacaggatgccgagggctgctggtacttccaccagacggtggtgccgtgcctgctg
gccgtggctgtgcaggcagccatgccagagagcacgcatacactgccagccaagacactg
ctggaggaagaggttctggctgccatgatcccagtcatcagtgctgctaccactcacctg
agccctgagctggctgcccagagtgtgtctcatgtggtgcccctcttcctggatggagag
gtttcattcctaccccaaaacagttttccctgctccttccagcctttcggggatggggag
tgcttggaggcacagagatgcctggtcgccctcctcatggccttcgtctgctccttgccc
cgtaatgtggcaatccctcagcaggaacggctgctccgggagctgctggcattgggctgt
tcctgcaactgtcccttcacagccaccacagctgctaagtgctttgcagggctggtgaac
aagcacccagcagggcagcagctgactgaaatcctacagcttgcagtgaacaggatggag
gccagcctcacagaggggccccgccgaatgcaggcactcaccttgctgctctgggtgacc
aaagccttggtgttgcgctaccaccccctgagctcctgcctgacagacaagctgctgggc
ctgttgggtgacacagagctcggccctgccgcagccgatggcttctccctgctcatggcc
gagtccccagacgtgctgcacaagggctgccatgctgacgtgcgcatcatgttccgccag
cgcttcttcactgacaacgtccccaagctggtgcaaggcttccatggggctggccccgat
gtgaaggccaattacctgaaaagcctgtcccatgtactcaaccacctccccaaacctgta
ctggtgacagagctgcccacgctgctttccctcctgcttgaggccttgtcctgctcagat
cgtgtagtacagctctccacactgagctgcctccacccactgctgctcgaagctccccag
atcatgagcctgcatgtcgacacactggtcaccaagttcctcaacctcacctccagcccc
accatggctgtccgcattgctgccctgcgctgtgcccatgccctcaccagtctgcccaca
acagtgctgctcccatacaagggccgagttatccgggcactggccaagcctttggatgac
aaaaagaggctagtgcggaaggaagcagtggcagcacgcggagaatggttcctgctcggg
agcccaggcaggtga
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