KEGG   Cinclus cinclus (white-throated dipper): 134046499
Entry
134046499         CDS       T10813                                 
Symbol
SMG7
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7 isoform X1
  KO
K14409  protein SMG7
Organism
ccic  Cinclus cinclus (white-throated dipper)
Pathway
ccic03015  mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:ccic03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     134046499 (SMG7)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     134046499 (SMG7)
SSDB
Other DBs
NCBI-GeneID: 134046499
NCBI-ProteinID: XP_062353002
LinkDB
Position
8:complement(7127332..7181324)
AA seq 1192 aa
MSLLCAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDL
WNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCR
VKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ
LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEV
KTRWSVSDFIKAFIKFHGHVYLSKSLEKLNPLREKLEEQFKRLLFQKAFNSQQLVHITVI
NLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLGVLCKCPLQNDYQEDSGAAYP
LPAVKVSMDWLKLRPSVFQEAVVDERRYIWPWLISLLNSFQPHEEDLSSNNATPLPEEFE
LQGFLALRPSFRNLDFSKGHQAITGDKEGQQRRIRQQRLIFTGKWIADNQPRLIQCENEV
GKLLFVTEIPELLLEDPSEAKESLALQEPSMAEPLCADGSPGLKSVLSSGRSLSNSCDAG
EKPMVTFKENIKPREMNREQGRIYPAKDIARERRDFSKGIVASKNDGKKDNNKRKNETKK
CGLDKMQEAGKQNVAVQVKSQTEMRKTPVSEARKTPVTQTPSQASSSQFIPIHHPGAFPP
LPSRPGFPPPTYVVPPPVAFSMSTGYTFPGGVSVPGTFLQPTAHSPAGNQVQGGKQSHIP
YSQQRPSGPGPMTQGPQQTQPPSQQPLSSLPAQATAQSASQLQVQALAQQQQQQSPTKAV
QGLGKSPPHHSGFQQYPQTDSSKQLWTPPQVQGSLGKIMSVKQPYYLQAQDPLKLFEQSL
QPPVMQQQPLEKKMKPFPMEPYNQNPSDVKVPEYYWDSSYGMTDNRVMSQQSNLDRRGKR
QGVFRSEQDAVSRMTFEDPKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLAS
LPGRSLFKSLLEKPSELMSQSSSFLSLSGFSLNQERYPNNSMFNEVYGKNMNTSTKTEVT
PSVAHQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFS
NFGPIGTPDNRDRRVADRWKTDKPAMGGFGLDYLPTTSSSSESSWHQSSAPSGTWAVQGP
PAMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGAMNPPH
NT seq 3579 nt   +upstreamnt  +downstreamnt
atgagcctgctgtgcgcgcagtatctccggcaggcagaagtcctgaaggctgacatgaca
gattcaaagctgggtccagcagaagtctggacatccagacaggctctacaggacttgtat
caaaaaatgctagtgactgatttggaatacgctttagacaaaaaagtggagcaggacctt
tggaatcatgcctttaaaaatcagatcacaacactccagggtcaggcgaaaaacagagca
aatccgaatcggagcgaagttcaggcgaacctttctctgtttttagaggcagctagtggc
ttctacacacagttattacaggaattgtgcacagtttttaacgtagacctgccgtgccgc
gtgaagtcttcccagctggggatcattagcaataaacagacgcacaccagcgccatcgtg
aagccacagtccagctcctgctcctacatctgccagcactgccttgtccacctgggagat
attgctcgctataggaatcagaccagccaggcagagtcttactatagacatgcagctcaa
cttgtcccttctaatggtcagccttataatcagttggctatcctagcttcctccaaagga
gaccacttaaccacaattttctactactgcagaagcattgctgtgaagtttcctttccca
gctgcctccactaacctacaaaaagcactttctaaagcactggaaagtcgtgatgaggtg
aagactcgatggagtgtgtctgatttcatcaaggcatttattaaatttcatggccatgtg
tacctgagtaagagcttggagaagctgaaccctcttcgagaaaagctggaagaacagttc
aagaggttgttgttccagaaggccttcaactctcagcagttagtccatattactgtgatc
aacctgttccaactgcaccacttgcgagacttcagcaatgaaacagagcagcacagctac
agccaggatgagcagctctgctggacacagctcctggctctcttcatgtcatttcttgga
gttctgtgcaagtgtcctttacaaaatgactaccaagaggactctggggctgcgtatcct
cttccagctgtgaaggtttcaatggactggctgaaacttaggcccagtgttttccaggag
gcagtggttgatgaaagacggtacatatggccctggctgatctctctcctaaatagtttc
cagcctcacgaagaagatctatccagtaataatgcaaccccccttccagaagaatttgag
ttgcaaggattcctggctctgagaccctcattcaggaacttggatttttccaaaggtcac
caggcaattacaggggataaagaagggcagcaacgtcggatacggcaacagcgcctgatc
ttcacaggcaaatggattgctgataaccagccaagattgattcaatgtgaaaatgaggta
ggaaagctcttgtttgtgacagaaatcccggagctcttactggaggaccctagtgaagcc
aaagagagtctcgccttgcaggagccatccatggcggagccgctgtgtgcagatgggagc
cctggactcaaatcagtgctgtcctctggcagaagcctgagcaacagctgcgatgcagga
gaaaagccaatggtcaccttcaaagagaatatcaagccccgggagatgaacagagaacaa
ggacgcatctaccccgcaaaggacatagcgagggagagacgggactttagcaaaggaata
gtagcaagtaagaatgatgggaagaaggataacaataaaagaaagaatgagaccaagaaa
tgcggcttggataagatgcaggaagcaggaaagcagaatgtggcagttcaggtgaaatcc
cagacagagatgaggaagactccggtgtctgaagccaggaaaacacctgtaactcagact
ccaagtcaggccagcagttcccagttcatccctattcatcacccaggagccttccctccc
cttcctagccggccaggatttcctcctccaacctatgttgtccctcctcctgtggctttc
tccatgagcacggggtacacctttccaggtggtgtttctgtcccaggaaccttcctccag
cccacagctcactcgcccgcaggaaaccaggtgcaaggtgggaaacagtcccacattcct
tacagccagcaacggccctctggaccagggccaatgacccagggacctcagcaaacacaa
cctccttcccagcaacccctctcatctttaccagctcaggcaacagcacagtccgcaagc
cagttacaggtccaagctctggcccagcagcagcagcaacagtcccccacgaaagctgtg
cagggcctggggaagagcccaccacaccactccggattccagcagtatccacagacagac
tcatcaaagcagctctggaccccccctcaagtccaaggctccctggggaagatcatgtct
gtaaagcagccctattacctgcaggcccaggaccctctcaagctctttgaacagtcatta
cagcctcctgtgatgcaacagcaacctttggagaaaaaaatgaagcctttcccaatggag
ccatataaccagaacccctcagatgtcaaggtgccagaatattactgggactcttcctat
ggcatgacggacaacagggtgatgagccagcagtcaaacttggaccgcagggggaagcgg
cagggagtcttccgctccgagcaggatgctgtctccaggatgacctttgaggaccccaag
agctcccctctgcttcctccggacctgttaaagagtctggctgccttggaggaggaggaa
gagctgattttctctaatcctcctgatctttacccagctctgctggggcctctcgcctct
cttcctggacgaagcctctttaagtccctgctggaaaaaccatcagaattgatgtctcag
tcatcatctttcctgtccctcagtggcttttctctaaatcaggaaagatatccaaacaac
agcatgttcaatgaggtatatggaaaaaacatgaataccagcacaaaaacagaagtcacc
ccttcagttgcccatcaggagacttcactctattctctgtttgaagggaccccgtggtct
ccatcccttccagccagctcagatcattcaacaccagccagccagtctcctcactcctcc
aaccccagcagcttgccaagctcccccccaacccataatcacaactctgttcctttctcc
aactttggacccattgggactccagacaacagagaccggagagttgcagaccgctggaaa
acagataagccagcaatgggagggtttggtctggactatctcccaacaacgtcgtcctct
tcggagagcagctggcaccagtccagtgctcccagtggtacctgggcagtccaaggccct
cctgccatggaggactcctcagctgtgcttatggagagcctgaagtccatctggtccagt
tccatgatgcaccccggcccctcggccctggagcagctgttgatgcagcagaagcagaag
cagcagcgcggacaaggcgccatgaatccgccgcattga

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